Protein–RNA interactions for Protein: O00479

HMGN4, High mobility group nucleosome-binding domain-containing protein 4, humanhuman

Predictions only

Length 90 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN4O00479 RPL23AP95-201ENST00000426806 265 ntBASIC-0.06□□□□□ -2.42
HMGN4O00479 RNU7-90P-201ENST00000459216 62 ntBASIC-0.06□□□□□ -2.42
HMGN4O00479 RNU7-34P-201ENST00000459394 64 ntBASIC-0.06□□□□□ -2.42
HMGN4O00479 HESX1-202ENST00000473921 757 ntTSL 5 BASIC-0.06□□□□□ -2.42
HMGN4O00479 CYCTP-201ENST00000504253 315 ntBASIC-0.06□□□□□ -2.42
HMGN4O00479 LINC02484-202ENST00000514877 546 ntTSL 3 BASIC-0.06□□□□□ -2.42
HMGN4O00479 MIR449C-201ENST00000516047 92 ntBASIC-0.06□□□□□ -2.42
HMGN4O00479 AC104229.1-201ENST00000561364 255 ntBASIC-0.06□□□□□ -2.42
HMGN4O00479 AC253576.2-201ENST00000618815 580 ntBASIC-0.06□□□□□ -2.42
HMGN4O00479 MIR411-201ENST00000362239 96 ntBASIC-0.07□□□□□ -2.42
HMGN4O00479 SNORD44.1-201ENST00000363202 61 ntBASIC-0.07□□□□□ -2.42
HMGN4O00479 Y_RNA.122-201ENST00000363331 96 ntBASIC-0.07□□□□□ -2.42
HMGN4O00479 RNU6-353P-201ENST00000364266 108 ntBASIC-0.07□□□□□ -2.42
HMGN4O00479 SNORD32B-201ENST00000364460 84 ntBASIC-0.07□□□□□ -2.42
HMGN4O00479 RNU4-45P-201ENST00000365469 141 ntBASIC-0.07□□□□□ -2.42
HMGN4O00479 AC003985.1-201ENST00000414127 362 ntTSL 3 BASIC-0.07□□□□□ -2.42
HMGN4O00479 AL359081.1-201ENST00000432083 615 ntTSL 2 BASIC-0.07□□□□□ -2.42
HMGN4O00479 AC005094.1-201ENST00000440420 368 ntBASIC-0.07□□□□□ -2.42
HMGN4O00479 NFU1P2-201ENST00000448700 469 ntBASIC-0.07□□□□□ -2.42
HMGN4O00479 AL358075.2-201ENST00000452785 339 ntTSL 2 BASIC-0.07□□□□□ -2.42
HMGN4O00479 AL365273.2-201ENST00000491114 492 ntAPPRIS P1 TSL 5 BASIC-0.07□□□□□ -2.42
HMGN4O00479 LINC02066-201ENST00000492731 580 ntTSL 4 BASIC-0.07□□□□□ -2.42
HMGN4O00479 RPF2P2-201ENST00000504693 896 ntBASIC-0.07□□□□□ -2.42
HMGN4O00479 AP001189.2-201ENST00000527320 189 ntBASIC-0.07□□□□□ -2.42
HMGN4O00479 AP003327.1-201ENST00000529684 127 ntBASIC-0.07□□□□□ -2.42
HMGN4O00479 OR6C7P-201ENST00000547875 934 ntBASIC-0.07□□□□□ -2.42
HMGN4O00479 C18orf54-203ENST00000578138 776 ntTSL 3 BASIC-0.07□□□□□ -2.42
HMGN4O00479 MIR4768-201ENST00000585270 74 ntBASIC-0.07□□□□□ -2.42
HMGN4O00479 BNIP3P9-201ENST00000603714 553 ntBASIC-0.07□□□□□ -2.42
HMGN4O00479 Z98751.3-201ENST00000604447 521 ntBASIC-0.07□□□□□ -2.42
HMGN4O00479 GHRLOS.1-201ENST00000610995 70 ntBASIC-0.07□□□□□ -2.42
HMGN4O00479 AC116165.2-201ENST00000616705 206 ntBASIC-0.07□□□□□ -2.42
HMGN4O00479 AL138955.1-201ENST00000622881 1040 ntBASIC-0.07□□□□□ -2.42
HMGN4O00479 LINC01717-201ENST00000415754 527 ntTSL 5 BASIC-0.08□□□□□ -2.42
HMGN4O00479 AL592466.1-201ENST00000428346 307 ntTSL 5 BASIC-0.08□□□□□ -2.42
HMGN4O00479 SNRPEP8-201ENST00000442866 260 ntBASIC-0.08□□□□□ -2.42
HMGN4O00479 U7.7-201ENST00000459276 60 ntBASIC-0.08□□□□□ -2.42
HMGN4O00479 RPL39P36-201ENST00000490784 156 ntBASIC-0.08□□□□□ -2.42
HMGN4O00479 AC145146.2-202ENST00000508118 326 ntTSL 3 BASIC-0.08□□□□□ -2.42
HMGN4O00479 AC090857.2-201ENST00000526362 723 ntTSL 2 BASIC-0.08□□□□□ -2.42
HMGN4O00479 AC011979.2-201ENST00000527568 352 ntBASIC-0.08□□□□□ -2.42
HMGN4O00479 AC007834.2-201ENST00000536310 343 ntBASIC-0.08□□□□□ -2.42
HMGN4O00479 AC138915.2-201ENST00000569776 97 ntBASIC-0.08□□□□□ -2.42
HMGN4O00479 MIR5695-201ENST00000579717 85 ntBASIC-0.08□□□□□ -2.42
HMGN4O00479 RNASEH2B-AS1-206ENST00000601286 657 ntTSL 5 BASIC-0.08□□□□□ -2.42
HMGN4O00479 AL031775.1-201ENST00000607014 887 ntBASIC-0.08□□□□□ -2.42
HMGN4O00479 ANKRD30BP1-201ENST00000451052 2186 ntBASIC-0.09□□□□□ -2.42
HMGN4O00479 PMCH-201ENST00000329406 766 ntAPPRIS P1 TSL 1 (best) BASIC-0.09□□□□□ -2.42
HMGN4O00479 RNY1-201ENST00000364228 113 ntBASIC-0.09□□□□□ -2.42
HMGN4O00479 MIR32-201ENST00000384965 70 ntBASIC-0.09□□□□□ -2.42
HMGN4O00479 MTCO3P41-201ENST00000414801 328 ntBASIC-0.09□□□□□ -2.42
HMGN4O00479 NDUFA5P4-201ENST00000436704 385 ntBASIC-0.09□□□□□ -2.42
HMGN4O00479 MTND5P14-201ENST00000441481 1267 ntBASIC-0.09□□□□□ -2.42
HMGN4O00479 AL135787.1-201ENST00000450154 302 ntTSL 3 BASIC-0.09□□□□□ -2.42
HMGN4O00479 AC003071.1-201ENST00000451219 789 ntBASIC-0.09□□□□□ -2.42
HMGN4O00479 LINC01774-201ENST00000453569 595 ntTSL 2 BASIC-0.09□□□□□ -2.42
HMGN4O00479 AC008852.1-201ENST00000510198 451 ntTSL 2 BASIC-0.09□□□□□ -2.42
HMGN4O00479 SNORA62.5-201ENST00000516634 120 ntBASIC-0.09□□□□□ -2.42
HMGN4O00479 RNU6-922P-201ENST00000516753 99 ntBASIC-0.09□□□□□ -2.42
HMGN4O00479 AP003072.2-201ENST00000527756 676 ntBASIC-0.09□□□□□ -2.42
HMGN4O00479 CARD18-202ENST00000530950 652 ntAPPRIS P1 TSL 5 BASIC-0.09□□□□□ -2.42
HMGN4O00479 AP003171.1-201ENST00000532770 266 ntTSL 2 BASIC-0.09□□□□□ -2.42
HMGN4O00479 SNRPGP1-201ENST00000553864 222 ntBASIC-0.09□□□□□ -2.42
HMGN4O00479 LINC02311-201ENST00000556144 383 ntTSL 3 BASIC-0.09□□□□□ -2.42
HMGN4O00479 AC243773.3-201ENST00000613270 256 ntBASIC-0.09□□□□□ -2.42
HMGN4O00479 PVT1_3.1-201ENST00000620853 95 ntBASIC-0.09□□□□□ -2.42
HMGN4O00479 RNU6-222P-201ENST00000362438 107 ntBASIC-0.1□□□□□ -2.43
HMGN4O00479 RNU6-534P-201ENST00000364877 106 ntBASIC-0.1□□□□□ -2.43
HMGN4O00479 SNORA36.2-201ENST00000384004 127 ntBASIC-0.1□□□□□ -2.43
HMGN4O00479 TRAJ41-201ENST00000390496 62 ntAPPRIS P1 BASIC-0.1□□□□□ -2.43
HMGN4O00479 SPINK13-201ENST00000398450 509 ntAPPRIS P2 TSL 1 (best) BASIC-0.1□□□□□ -2.43
HMGN4O00479 CALM2P3-201ENST00000400429 449 ntBASIC-0.1□□□□□ -2.43
HMGN4O00479 AC068533.2-201ENST00000411872 306 ntBASIC-0.1□□□□□ -2.43
HMGN4O00479 AC244098.3-201ENST00000424803 96 ntBASIC-0.1□□□□□ -2.43
HMGN4O00479 AC008080.3-201ENST00000440074 380 ntTSL 3 BASIC-0.1□□□□□ -2.43
HMGN4O00479 LINC01032-201ENST00000451690 276 ntTSL 5 BASIC-0.1□□□□□ -2.43
HMGN4O00479 AL049830.1-201ENST00000468034 425 ntBASIC-0.1□□□□□ -2.43
HMGN4O00479 MTCO3P28-201ENST00000513351 515 ntBASIC-0.1□□□□□ -2.43
HMGN4O00479 AC020661.3-201ENST00000558101 414 ntTSL 3 BASIC-0.1□□□□□ -2.43
HMGN4O00479 MIR4742-201ENST00000581069 85 ntBASIC-0.1□□□□□ -2.43
HMGN4O00479 MIR3136-201ENST00000583498 78 ntBASIC-0.1□□□□□ -2.43
HMGN4O00479 AC091805.2-201ENST00000603848 235 ntBASIC-0.1□□□□□ -2.43
HMGN4O00479 MIR371B-201ENST00000638082 66 ntBASIC-0.1□□□□□ -2.43
HMGN4O00479 ANGPTL3-201ENST00000371129 2805 ntAPPRIS P1 TSL 1 (best) BASIC-0.1□□□□□ -2.43
HMGN4O00479 IL6ST-202ENST00000381286 201 ntTSL 1 (best) BASIC-0.11□□□□□ -2.43
HMGN4O00479 RNU6-549P-201ENST00000384433 107 ntBASIC-0.11□□□□□ -2.43
HMGN4O00479 MIR301A-201ENST00000385261 86 ntBASIC-0.11□□□□□ -2.43
HMGN4O00479 MRPL30-202ENST00000409145 562 ntTSL 2 BASIC-0.11□□□□□ -2.43
HMGN4O00479 MTCYBP5-201ENST00000423752 1135 ntBASIC-0.11□□□□□ -2.43
HMGN4O00479 MTCO2P1-201ENST00000424648 477 ntBASIC-0.11□□□□□ -2.43
HMGN4O00479 AL353747.2-201ENST00000439207 205 ntTSL 3 BASIC-0.11□□□□□ -2.43
HMGN4O00479 ELOCP30-201ENST00000447108 299 ntBASIC-0.11□□□□□ -2.43
HMGN4O00479 MTND2P33-201ENST00000506452 1031 ntBASIC-0.11□□□□□ -2.43
HMGN4O00479 AC027338.1-201ENST00000514840 825 ntBASIC-0.11□□□□□ -2.43
HMGN4O00479 RNU5F-2P-201ENST00000516066 82 ntBASIC-0.11□□□□□ -2.43
HMGN4O00479 AC092325.1-201ENST00000566449 554 ntBASIC-0.11□□□□□ -2.43
HMGN4O00479 AC120349.2-201ENST00000625002 298 ntBASIC-0.11□□□□□ -2.43
HMGN4O00479 AC100810.6-201ENST00000638068 285 ntBASIC-0.11□□□□□ -2.43
HMGN4O00479 DEUP1-202ENST00000525646 1920 ntTSL 1 (best) BASIC-0.12□□□□□ -2.43
HMGN4O00479 MIR103A1-201ENST00000362165 78 ntBASIC-0.12□□□□□ -2.43
Retrieved 100 of 98,524 protein–RNA pairs in 131.5 ms