Protein–RNA interactions for Protein: O00370

LINE-1 retrotransposable element ORF2 protein, humanhuman

Predictions only

Length 1,275 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
O00370 AC079804.2-201ENST00000490376 200 ntBASIC2.34□□□□□ -2.03
O00370 AC090255.1-201ENST00000495779 349 ntBASIC2.34□□□□□ -2.03
O00370 AC018710.1-201ENST00000506509 158 ntBASIC2.34□□□□□ -2.03
O00370 AF213884.2-201ENST00000510417 903 ntBASIC2.34□□□□□ -2.03
O00370 RNU7-193P-201ENST00000516723 65 ntBASIC2.34□□□□□ -2.03
O00370 AC109479.2-201ENST00000517842 174 ntBASIC2.34□□□□□ -2.03
O00370 AC090568.2-205ENST00000518631 576 ntTSL 4 BASIC2.34□□□□□ -2.03
O00370 AC091944.1-201ENST00000521984 449 ntTSL 3 BASIC2.34□□□□□ -2.03
O00370 CR383656.8-201ENST00000549046 145 ntBASIC2.34□□□□□ -2.03
O00370 SNRPGP18-201ENST00000553000 214 ntBASIC2.34□□□□□ -2.03
O00370 AL133279.1-202ENST00000556789 456 ntTSL 5 BASIC2.34□□□□□ -2.03
O00370 AC007598.1-202ENST00000561528 435 ntTSL 3 BASIC2.34□□□□□ -2.03
O00370 AC087463.2-201ENST00000565943 472 ntTSL 3 BASIC2.34□□□□□ -2.03
O00370 AC104984.5-201ENST00000586878 94 ntBASIC2.34□□□□□ -2.03
O00370 AC006504.5-204ENST00000592404 765 ntTSL 3 BASIC2.34□□□□□ -2.03
O00370 AC073410.2-201ENST00000603240 332 ntBASIC2.34□□□□□ -2.03
O00370 AC009314.1-201ENST00000603871 304 ntBASIC2.34□□□□□ -2.03
O00370 ELOCP5-201ENST00000604924 333 ntBASIC2.34□□□□□ -2.03
O00370 AL138963.2-201ENST00000605137 226 ntBASIC2.34□□□□□ -2.03
O00370 AC138627.2-201ENST00000624202 601 ntBASIC2.34□□□□□ -2.03
O00370 MIR203B-201ENST00000636080 86 ntBASIC2.34□□□□□ -2.03
O00370 ATP8A2P2-201ENST00000437678 1568 ntBASIC2.34□□□□□ -2.03
O00370 NEDD4-205ENST00000506154 6751 ntTSL 1 (best) BASIC2.34□□□□□ -2.03
O00370 AC130466.1-201ENST00000636354 4683 ntTSL 5 BASIC2.34□□□□□ -2.04
O00370 C6orf10-201ENST00000375007 2125 ntAPPRIS ALT2 TSL 5 BASIC2.33□□□□□ -2.04
O00370 STX7-202ENST00000367941 15791 ntAPPRIS P1 TSL 1 (best) BASIC2.33□□□□□ -2.04
O00370 Y_RNA.157-201ENST00000363638 102 ntBASIC2.33□□□□□ -2.04
O00370 SNORD113-7-201ENST00000363762 77 ntBASIC2.33□□□□□ -2.04
O00370 RNU6-214P-201ENST00000384130 107 ntBASIC2.33□□□□□ -2.04
O00370 SNORA51.11-201ENST00000384442 131 ntBASIC2.33□□□□□ -2.04
O00370 AL356776.1-201ENST00000406574 447 ntBASIC2.33□□□□□ -2.04
O00370 HMGB3P2-201ENST00000411913 584 ntBASIC2.33□□□□□ -2.04
O00370 AL117339.3-201ENST00000418733 162 ntBASIC2.33□□□□□ -2.04
O00370 RPL30P16-201ENST00000419341 429 ntBASIC2.33□□□□□ -2.04
O00370 AL161935.1-201ENST00000420945 421 ntTSL 3 BASIC2.33□□□□□ -2.04
O00370 AC090515.1-201ENST00000465295 476 ntBASIC2.33□□□□□ -2.04
O00370 ANXA2P1-201ENST00000505539 926 ntBASIC2.33□□□□□ -2.04
O00370 MTCYBP40-201ENST00000509390 1135 ntBASIC2.33□□□□□ -2.04
O00370 RNU1-41P-201ENST00000516161 162 ntBASIC2.33□□□□□ -2.04
O00370 RNA5SP200-201ENST00000516360 103 ntBASIC2.33□□□□□ -2.04
O00370 RNU1-48P-201ENST00000516400 162 ntBASIC2.33□□□□□ -2.04
O00370 RNU6-1314P-201ENST00000517139 104 ntBASIC2.33□□□□□ -2.04
O00370 LINC02301-203ENST00000555798 789 ntTSL 3 BASIC2.33□□□□□ -2.04
O00370 PSMA4-205ENST00000558281 773 ntTSL 3 BASIC2.33□□□□□ -2.04
O00370 AC026464.5-201ENST00000562497 722 ntBASIC2.33□□□□□ -2.04
O00370 AC090897.2-201ENST00000581715 130 ntBASIC2.33□□□□□ -2.04
O00370 AC064836.2-201ENST00000609491 462 ntBASIC2.33□□□□□ -2.04
O00370 C8orf59-209ENST00000612977 586 ntAPPRIS P1 TSL 2 BASIC2.33□□□□□ -2.04
O00370 AL136221.1-201ENST00000621449 509 ntBASIC2.33□□□□□ -2.04
O00370 AC064859.1-201ENST00000624741 174 ntBASIC2.33□□□□□ -2.04
O00370 AP000553.5-201ENST00000641933 54 ntBASIC2.33□□□□□ -2.04
O00370 CASC19-280ENST00000642102 1351 ntBASIC2.33□□□□□ -2.04
O00370 PARPBP-201ENST00000327680 3014 ntAPPRIS P1 TSL 2 BASIC2.33□□□□□ -2.04
O00370 MIER3-202ENST00000381199 5188 ntAPPRIS ALT1 TSL 1 (best) BASIC2.32□□□□□ -2.04
O00370 MAP4K3-205ENST00000437545 3924 ntTSL 5 BASIC2.32□□□□□ -2.04
O00370 TSACC-205ENST00000368255 751 ntAPPRIS P1 TSL 1 (best) BASIC2.32□□□□□ -2.04
O00370 BTLA-202ENST00000383680 726 ntAPPRIS ALT2 TSL 1 (best) BASIC2.32□□□□□ -2.04
O00370 RNU6-692P-201ENST00000384496 107 ntBASIC2.32□□□□□ -2.04
O00370 Y_RNA.530-201ENST00000384587 101 ntBASIC2.32□□□□□ -2.04
O00370 RNA5SP118-201ENST00000410385 109 ntBASIC2.32□□□□□ -2.04
O00370 AC079150.1-201ENST00000413043 383 ntTSL 3 BASIC2.32□□□□□ -2.04
O00370 AC012370.1-201ENST00000419244 530 ntTSL 3 BASIC2.32□□□□□ -2.04
O00370 AL356320.1-201ENST00000429616 163 ntBASIC2.32□□□□□ -2.04
O00370 RPS15AP10-201ENST00000432472 382 ntBASIC2.32□□□□□ -2.04
O00370 NDUFA5P4-201ENST00000436704 385 ntBASIC2.32□□□□□ -2.04
O00370 AL359672.1-201ENST00000442302 409 ntBASIC2.32□□□□□ -2.04
O00370 ZEB1-AS1-204ENST00000450834 576 ntTSL 3 BASIC2.32□□□□□ -2.04
O00370 AC005703.2-201ENST00000453339 343 ntTSL 2 BASIC2.32□□□□□ -2.04
O00370 AP001025.1-201ENST00000486139 332 ntBASIC2.32□□□□□ -2.04
O00370 AC004917.1-201ENST00000490856 575 ntTSL 4 BASIC2.32□□□□□ -2.04
O00370 AC092944.1-205ENST00000494885 517 ntTSL 4 BASIC2.32□□□□□ -2.04
O00370 AC008526.1-201ENST00000509149 338 ntBASIC2.32□□□□□ -2.04
O00370 RNU5B-3P-201ENST00000516601 115 ntBASIC2.32□□□□□ -2.04
O00370 AP002770.2-201ENST00000543613 532 ntBASIC2.32□□□□□ -2.04
O00370 AC127894.1-201ENST00000548266 851 ntTSL 3 BASIC2.32□□□□□ -2.04
O00370 RBBP8-210ENST00000581687 617 ntTSL 2 BASIC2.32□□□□□ -2.04
O00370 AC060780.3-201ENST00000589464 80 ntBASIC2.32□□□□□ -2.04
O00370 AL355297.2-201ENST00000604792 129 ntBASIC2.32□□□□□ -2.04
O00370 BNIP3P10-201ENST00000605360 577 ntBASIC2.32□□□□□ -2.04
O00370 HTN1-205ENST00000610341 536 ntAPPRIS P1 TSL 1 (best) BASIC2.32□□□□□ -2.04
O00370 FAM157A-202ENST00000615155 405 ntBASIC2.32□□□□□ -2.04
O00370 AC024581.2-201ENST00000619986 252 ntBASIC2.32□□□□□ -2.04
O00370 AC244517.12-201ENST00000623581 663 ntBASIC2.32□□□□□ -2.04
O00370 AC090517.3-201ENST00000625170 141 ntBASIC2.32□□□□□ -2.04
O00370 KIF20B-202ENST00000371728 6419 ntAPPRIS ALT2 TSL 1 (best) BASIC2.32□□□□□ -2.04
O00370 FGF7-206ENST00000614567 3936 ntAPPRIS P1 TSL 1 (best) BASIC2.32□□□□□ -2.04
O00370 SLC39A10-201ENST00000359634 5322 ntAPPRIS P1 TSL 1 (best) BASIC2.32□□□□□ -2.04
O00370 LINC01592-202ENST00000518540 2367 ntTSL 2 BASIC2.31□□□□□ -2.04
O00370 AC011124.2-201ENST00000518739 3222 ntTSL 1 (best) BASIC2.31□□□□□ -2.04
O00370 SNX16-212ENST00000615066 1918 ntTSL 5 BASIC2.31□□□□□ -2.04
O00370 AC121333.1-201ENST00000567488 2709 ntBASIC2.31□□□□□ -2.04
O00370 Y_RNA.100-201ENST00000363141 102 ntBASIC2.31□□□□□ -2.04
O00370 Y_RNA.414-201ENST00000384011 101 ntBASIC2.31□□□□□ -2.04
O00370 SNORA6-201ENST00000384033 151 ntBASIC2.31□□□□□ -2.04
O00370 SNORA70B-201ENST00000384210 135 ntBASIC2.31□□□□□ -2.04
O00370 Z98742.3-201ENST00000418637 326 ntBASIC2.31□□□□□ -2.04
O00370 AC005482.1-201ENST00000420758 575 ntTSL 4 BASIC2.31□□□□□ -2.04
O00370 MTCO3P18-201ENST00000440206 761 ntBASIC2.31□□□□□ -2.04
O00370 MAMDC2-AS1-205ENST00000451488 317 ntTSL 3 BASIC2.31□□□□□ -2.04
O00370 RPL7P43-201ENST00000478876 753 ntBASIC2.31□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 141.4 ms