Protein–RNA interactions for Protein: A0A0B4J268

TRAV4, T-cell receptor alpha variable 4 (Fragment), humanhuman

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV4A0A0B4J268 AF131216.2-201ENST00000512316 564 ntBASIC0.53□□□□□ -2.32
TRAV4A0A0B4J268 GYPA-209ENST00000512789 258 ntTSL 1 (best) BASIC0.53□□□□□ -2.32
TRAV4A0A0B4J268 SNORA31.4-201ENST00000516049 129 ntBASIC0.53□□□□□ -2.32
TRAV4A0A0B4J268 RN7SKP265-201ENST00000516448 223 ntBASIC0.53□□□□□ -2.32
TRAV4A0A0B4J268 AC023050.2-201ENST00000544968 387 ntBASIC0.53□□□□□ -2.32
TRAV4A0A0B4J268 AC109446.1-201ENST00000566172 220 ntBASIC0.53□□□□□ -2.32
TRAV4A0A0B4J268 MTND4LP25-201ENST00000570218 163 ntBASIC0.53□□□□□ -2.32
TRAV4A0A0B4J268 MIR3973-201ENST00000579824 107 ntBASIC0.53□□□□□ -2.32
TRAV4A0A0B4J268 BCRP9-201ENST00000605312 388 ntBASIC0.53□□□□□ -2.32
TRAV4A0A0B4J268 BNIP3P10-201ENST00000605360 577 ntBASIC0.53□□□□□ -2.32
TRAV4A0A0B4J268 AC144521.1-201ENST00000607148 956 ntBASIC0.53□□□□□ -2.32
TRAV4A0A0B4J268 HOTAIRM1_5.1-201ENST00000619311 145 ntBASIC0.53□□□□□ -2.32
TRAV4A0A0B4J268 ZNF415-224ENST00000601493 2132 ntTSL 1 (best) BASIC0.53□□□□□ -2.32
TRAV4A0A0B4J268 RNU6-1123P-201ENST00000362347 106 ntBASIC0.52□□□□□ -2.33
TRAV4A0A0B4J268 RNU6-78P-201ENST00000362897 107 ntBASIC0.52□□□□□ -2.33
TRAV4A0A0B4J268 Y_RNA.192-201ENST00000363977 102 ntBASIC0.52□□□□□ -2.33
TRAV4A0A0B4J268 SNORA12.2-201ENST00000391040 156 ntBASIC0.52□□□□□ -2.33
TRAV4A0A0B4J268 RNU6ATAC27P-201ENST00000408289 119 ntBASIC0.52□□□□□ -2.33
TRAV4A0A0B4J268 RNU6ATAC31P-201ENST00000408513 126 ntBASIC0.52□□□□□ -2.33
TRAV4A0A0B4J268 HMGN1P14-201ENST00000412459 517 ntBASIC0.52□□□□□ -2.33
TRAV4A0A0B4J268 AL390774.2-201ENST00000423942 788 ntTSL 3 BASIC0.52□□□□□ -2.33
TRAV4A0A0B4J268 Z73417.1-201ENST00000447373 778 ntBASIC0.52□□□□□ -2.33
TRAV4A0A0B4J268 AC007395.1-201ENST00000451333 677 ntBASIC0.52□□□□□ -2.33
TRAV4A0A0B4J268 RNU6-165P-201ENST00000517170 99 ntBASIC0.52□□□□□ -2.33
TRAV4A0A0B4J268 AC090142.3-201ENST00000519012 385 ntBASIC0.52□□□□□ -2.33
TRAV4A0A0B4J268 AP003171.1-201ENST00000532770 266 ntTSL 2 BASIC0.52□□□□□ -2.33
TRAV4A0A0B4J268 AC025423.5-201ENST00000550230 219 ntBASIC0.52□□□□□ -2.33
TRAV4A0A0B4J268 LINC02464-201ENST00000552060 368 ntTSL 2 BASIC0.52□□□□□ -2.33
TRAV4A0A0B4J268 AL157911.1-202ENST00000554123 502 ntTSL 3 BASIC0.52□□□□□ -2.33
TRAV4A0A0B4J268 DEFB131E-202ENST00000602581 683 ntBASIC0.52□□□□□ -2.33
TRAV4A0A0B4J268 AL158032.1-201ENST00000605401 106 ntBASIC0.52□□□□□ -2.33
TRAV4A0A0B4J268 AC131159.1-201ENST00000621854 213 ntBASIC0.52□□□□□ -2.33
TRAV4A0A0B4J268 SNORD98-201ENST00000636377 67 ntBASIC0.52□□□□□ -2.33
TRAV4A0A0B4J268 UBE3A-225ENST00000636667 5726 ntTSL 5 BASIC0.52□□□□□ -2.33
TRAV4A0A0B4J268 RNY4P24-201ENST00000362735 96 ntBASIC0.51□□□□□ -2.33
TRAV4A0A0B4J268 SNORD31B-201ENST00000364977 69 ntBASIC0.51□□□□□ -2.33
TRAV4A0A0B4J268 MIR200A-201ENST00000384875 90 ntBASIC0.51□□□□□ -2.33
TRAV4A0A0B4J268 AC063976.4-201ENST00000421971 163 ntBASIC0.51□□□□□ -2.33
TRAV4A0A0B4J268 MTND5P15-201ENST00000434246 349 ntBASIC0.51□□□□□ -2.33
TRAV4A0A0B4J268 AC114485.1-201ENST00000447916 657 ntTSL 3 BASIC0.51□□□□□ -2.33
TRAV4A0A0B4J268 LINC01032-201ENST00000451690 276 ntTSL 5 BASIC0.51□□□□□ -2.33
TRAV4A0A0B4J268 SNORD124-201ENST00000459577 104 ntBASIC0.51□□□□□ -2.33
TRAV4A0A0B4J268 LINC02066-201ENST00000492731 580 ntTSL 4 BASIC0.51□□□□□ -2.33
TRAV4A0A0B4J268 RNU6-322P-201ENST00000516010 103 ntBASIC0.51□□□□□ -2.33
TRAV4A0A0B4J268 RNA5SP102-201ENST00000516865 106 ntBASIC0.51□□□□□ -2.33
TRAV4A0A0B4J268 AC011979.2-201ENST00000527568 352 ntBASIC0.51□□□□□ -2.33
TRAV4A0A0B4J268 ADI1P3-201ENST00000549509 470 ntBASIC0.51□□□□□ -2.33
TRAV4A0A0B4J268 AC008015.1-201ENST00000555505 465 ntBASIC0.51□□□□□ -2.33
TRAV4A0A0B4J268 HMGN1P30-201ENST00000589286 268 ntBASIC0.51□□□□□ -2.33
TRAV4A0A0B4J268 AC092071.1-201ENST00000597260 549 ntTSL 5 BASIC0.51□□□□□ -2.33
TRAV4A0A0B4J268 AC068790.6-201ENST00000602558 258 ntBASIC0.51□□□□□ -2.33
TRAV4A0A0B4J268 AC068620.3-201ENST00000602749 560 ntBASIC0.51□□□□□ -2.33
TRAV4A0A0B4J268 AC105129.3-201ENST00000605455 485 ntBASIC0.51□□□□□ -2.33
TRAV4A0A0B4J268 TEX41-243ENST00000614173 190 ntTSL 5 BASIC0.51□□□□□ -2.33
TRAV4A0A0B4J268 AC103706.2-201ENST00000638080 240 ntBASIC0.51□□□□□ -2.33
TRAV4A0A0B4J268 MT-ATP6-201ENST00000361899 681 ntAPPRIS P1 BASIC0.5□□□□□ -2.33
TRAV4A0A0B4J268 RNU5E-7P-201ENST00000365290 117 ntBASIC0.5□□□□□ -2.33
TRAV4A0A0B4J268 RNU6-723P-201ENST00000383973 107 ntBASIC0.5□□□□□ -2.33
TRAV4A0A0B4J268 RNU6-910P-201ENST00000390844 107 ntBASIC0.5□□□□□ -2.33
TRAV4A0A0B4J268 SNORD12-201ENST00000391002 90 ntBASIC0.5□□□□□ -2.33
TRAV4A0A0B4J268 RNU6-1245P-201ENST00000411130 106 ntBASIC0.5□□□□□ -2.33
TRAV4A0A0B4J268 AC095032.2-201ENST00000414923 418 ntTSL 2 BASIC0.5□□□□□ -2.33
TRAV4A0A0B4J268 AC019070.1-201ENST00000415008 1024 ntBASIC0.5□□□□□ -2.33
TRAV4A0A0B4J268 TRIM60P10Y-201ENST00000425589 751 ntBASIC0.5□□□□□ -2.33
TRAV4A0A0B4J268 USP9YP14-201ENST00000430663 563 ntBASIC0.5□□□□□ -2.33
TRAV4A0A0B4J268 AL731563.2-201ENST00000431293 291 ntTSL 5 BASIC0.5□□□□□ -2.33
TRAV4A0A0B4J268 SIRPG-AS1-201ENST00000437384 410 ntTSL 3 BASIC0.5□□□□□ -2.33
TRAV4A0A0B4J268 AL591501.1-201ENST00000439992 495 ntTSL 5 BASIC0.5□□□□□ -2.33
TRAV4A0A0B4J268 MTND1P18-201ENST00000448191 573 ntBASIC0.5□□□□□ -2.33
TRAV4A0A0B4J268 RAP1BP2-201ENST00000478270 544 ntBASIC0.5□□□□□ -2.33
TRAV4A0A0B4J268 AC074344.1-201ENST00000512823 224 ntBASIC0.5□□□□□ -2.33
TRAV4A0A0B4J268 RNU6-1041P-201ENST00000516254 102 ntBASIC0.5□□□□□ -2.33
TRAV4A0A0B4J268 RNA5SP168-201ENST00000516642 112 ntBASIC0.5□□□□□ -2.33
TRAV4A0A0B4J268 AC027701.1-201ENST00000520155 823 ntTSL 3 BASIC0.5□□□□□ -2.33
TRAV4A0A0B4J268 AC087883.1-201ENST00000551882 391 ntBASIC0.5□□□□□ -2.33
TRAV4A0A0B4J268 AC109446.2-201ENST00000567872 497 ntBASIC0.5□□□□□ -2.33
TRAV4A0A0B4J268 AC110760.3-201ENST00000598794 467 ntBASIC0.5□□□□□ -2.33
TRAV4A0A0B4J268 AP000943.4-201ENST00000622912 357 ntBASIC0.5□□□□□ -2.33
TRAV4A0A0B4J268 AC126544.2-201ENST00000625174 749 ntBASIC0.5□□□□□ -2.33
TRAV4A0A0B4J268 PTP4A2-220ENST00000627328 615 ntTSL 5 BASIC0.5□□□□□ -2.33
TRAV4A0A0B4J268 MIR373-201ENST00000362273 69 ntBASIC0.49□□□□□ -2.33
TRAV4A0A0B4J268 RNU4-79P-201ENST00000362764 141 ntBASIC0.49□□□□□ -2.33
TRAV4A0A0B4J268 MIR578-201ENST00000384828 96 ntBASIC0.49□□□□□ -2.33
TRAV4A0A0B4J268 AL117342.1-201ENST00000404861 406 ntBASIC0.49□□□□□ -2.33
TRAV4A0A0B4J268 MTCYBP2-201ENST00000407745 171 ntBASIC0.49□□□□□ -2.33
TRAV4A0A0B4J268 RNU6ATAC8P-201ENST00000408460 126 ntBASIC0.49□□□□□ -2.33
TRAV4A0A0B4J268 RNU6-733P-201ENST00000410759 104 ntBASIC0.49□□□□□ -2.33
TRAV4A0A0B4J268 AC002429.1-201ENST00000437672 148 ntBASIC0.49□□□□□ -2.33
TRAV4A0A0B4J268 AC016925.1-201ENST00000458303 298 ntBASIC0.49□□□□□ -2.33
TRAV4A0A0B4J268 RNU7-14P-201ENST00000459331 62 ntBASIC0.49□□□□□ -2.33
TRAV4A0A0B4J268 RNU7-34P-201ENST00000459394 64 ntBASIC0.49□□□□□ -2.33
TRAV4A0A0B4J268 RPL39P38-201ENST00000467018 153 ntBASIC0.49□□□□□ -2.33
TRAV4A0A0B4J268 AC008539.1-201ENST00000507653 482 ntTSL 3 BASIC0.49□□□□□ -2.33
TRAV4A0A0B4J268 AC034244.1-201ENST00000507687 207 ntBASIC0.49□□□□□ -2.33
TRAV4A0A0B4J268 AC104806.1-201ENST00000508720 308 ntBASIC0.49□□□□□ -2.33
TRAV4A0A0B4J268 AC013828.2-201ENST00000532487 235 ntBASIC0.49□□□□□ -2.33
TRAV4A0A0B4J268 AC100763.1-201ENST00000532735 522 ntTSL 3 BASIC0.49□□□□□ -2.33
TRAV4A0A0B4J268 LINC02311-201ENST00000556144 383 ntTSL 3 BASIC0.49□□□□□ -2.33
TRAV4A0A0B4J268 AC097717.1-250ENST00000608498 273 ntTSL 5 BASIC0.49□□□□□ -2.33
TRAV4A0A0B4J268 AC104073.3-201ENST00000610942 955 ntBASIC0.49□□□□□ -2.33
Retrieved 100 of 98,524 protein–RNA pairs in 99.9 ms