Protein–RNA interactions for Protein: A0A096LP49

CCDC187, Coiled-coil domain-containing protein 187, humanhuman

Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC187A0A096LP49 CHEK2P4-201ENST00000450340 246 ntBASIC3.05□□□□□ -1.92
CCDC187A0A096LP49 AL353752.1-201ENST00000454946 260 ntBASIC3.05□□□□□ -1.92
CCDC187A0A096LP49 RPS29P12-201ENST00000460178 152 ntBASIC3.05□□□□□ -1.92
CCDC187A0A096LP49 RPL9P9-202ENST00000466501 579 ntBASIC3.05□□□□□ -1.92
CCDC187A0A096LP49 RNA5SP380-201ENST00000517190 98 ntBASIC3.05□□□□□ -1.92
CCDC187A0A096LP49 NDUFB9P3-201ENST00000521269 501 ntBASIC3.05□□□□□ -1.92
CCDC187A0A096LP49 AC131281.1-201ENST00000522984 164 ntBASIC3.05□□□□□ -1.92
CCDC187A0A096LP49 AC022616.4-201ENST00000522985 181 ntBASIC3.05□□□□□ -1.92
CCDC187A0A096LP49 LINC02165-201ENST00000563061 443 ntTSL 3 BASIC3.05□□□□□ -1.92
CCDC187A0A096LP49 CPDP1-201ENST00000579660 283 ntBASIC3.05□□□□□ -1.92
CCDC187A0A096LP49 MIR2682-201ENST00000580305 110 ntBASIC3.05□□□□□ -1.92
CCDC187A0A096LP49 AC005046.1-201ENST00000608515 625 ntBASIC3.05□□□□□ -1.92
CCDC187A0A096LP49 AC000403.1-201ENST00000613696 3585 ntBASIC3.05□□□□□ -1.92
CCDC187A0A096LP49 BCLAF1P1-201ENST00000505813 2752 ntBASIC3.05□□□□□ -1.92
CCDC187A0A096LP49 PHF3-202ENST00000393387 6947 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
CCDC187A0A096LP49 CEP57L1-216ENST00000521522 2259 ntTSL 5 BASIC3.04□□□□□ -1.92
CCDC187A0A096LP49 DCUN1D1-201ENST00000292782 7954 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
CCDC187A0A096LP49 ADGRG2-206ENST00000360279 4702 ntTSL 1 (best) BASIC3.04□□□□□ -1.92
CCDC187A0A096LP49 FNBP1L-203ENST00000370253 3889 ntAPPRIS ALT1 TSL 5 BASIC3.04□□□□□ -1.92
CCDC187A0A096LP49 RNU6-1059P-201ENST00000363752 98 ntBASIC3.04□□□□□ -1.92
CCDC187A0A096LP49 RNU6-105P-201ENST00000363909 104 ntBASIC3.04□□□□□ -1.92
CCDC187A0A096LP49 RNU6-336P-201ENST00000364891 107 ntBASIC3.04□□□□□ -1.92
CCDC187A0A096LP49 Y_RNA.552-201ENST00000384665 112 ntBASIC3.04□□□□□ -1.92
CCDC187A0A096LP49 Y_RNA.562-201ENST00000384695 113 ntBASIC3.04□□□□□ -1.92
CCDC187A0A096LP49 RNA5SP354-201ENST00000391247 136 ntBASIC3.04□□□□□ -1.92
CCDC187A0A096LP49 FTH1P15-201ENST00000406984 280 ntBASIC3.04□□□□□ -1.92
CCDC187A0A096LP49 AL133396.1-201ENST00000432048 687 ntBASIC3.04□□□□□ -1.92
CCDC187A0A096LP49 AL161651.1-201ENST00000440882 223 ntBASIC3.04□□□□□ -1.92
CCDC187A0A096LP49 DYNLT3P2-201ENST00000442517 295 ntBASIC3.04□□□□□ -1.92
CCDC187A0A096LP49 AC124916.1-201ENST00000444020 547 ntBASIC3.04□□□□□ -1.92
CCDC187A0A096LP49 AC073910.1-201ENST00000445047 438 ntBASIC3.04□□□□□ -1.92
CCDC187A0A096LP49 AC008571.1-201ENST00000467232 300 ntBASIC3.04□□□□□ -1.92
CCDC187A0A096LP49 AC074033.2-201ENST00000480669 535 ntTSL 3 BASIC3.04□□□□□ -1.92
CCDC187A0A096LP49 RPS4XP22-201ENST00000480755 780 ntBASIC3.04□□□□□ -1.92
CCDC187A0A096LP49 MRPL42P6-201ENST00000486397 371 ntBASIC3.04□□□□□ -1.92
CCDC187A0A096LP49 RPL23AP49-201ENST00000492925 468 ntBASIC3.04□□□□□ -1.92
CCDC187A0A096LP49 RAC1P5-201ENST00000512182 576 ntBASIC3.04□□□□□ -1.92
CCDC187A0A096LP49 SNORD19.2-201ENST00000516978 73 ntBASIC3.04□□□□□ -1.92
CCDC187A0A096LP49 AC022690.2-201ENST00000525673 589 ntTSL 3 BASIC3.04□□□□□ -1.92
CCDC187A0A096LP49 CR383656.8-201ENST00000549046 145 ntBASIC3.04□□□□□ -1.92
CCDC187A0A096LP49 AC007375.1-201ENST00000554513 578 ntBASIC3.04□□□□□ -1.92
CCDC187A0A096LP49 SUB1P3-201ENST00000564581 315 ntBASIC3.04□□□□□ -1.92
CCDC187A0A096LP49 UBL5P2-201ENST00000583788 219 ntBASIC3.04□□□□□ -1.92
CCDC187A0A096LP49 AC125232.2-201ENST00000592457 143 ntBASIC3.04□□□□□ -1.92
CCDC187A0A096LP49 AC141273.2-201ENST00000618989 130 ntBASIC3.04□□□□□ -1.92
CCDC187A0A096LP49 DLD-214ENST00000639772 421 ntTSL 5 BASIC3.04□□□□□ -1.92
CCDC187A0A096LP49 ANGPTL1-201ENST00000234816 3348 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
CCDC187A0A096LP49 ZNF280C-201ENST00000370978 4634 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
CCDC187A0A096LP49 RNU6-527P-201ENST00000363425 104 ntBASIC3.03□□□□□ -1.92
CCDC187A0A096LP49 SNORA71.1-201ENST00000364523 117 ntBASIC3.03□□□□□ -1.92
CCDC187A0A096LP49 RNU6-1317P-201ENST00000364582 104 ntBASIC3.03□□□□□ -1.92
CCDC187A0A096LP49 Y_RNA.276-201ENST00000364732 109 ntBASIC3.03□□□□□ -1.92
CCDC187A0A096LP49 SNORD116-20-201ENST00000384529 92 ntBASIC3.03□□□□□ -1.92
CCDC187A0A096LP49 AL513475.1-201ENST00000406602 315 ntBASIC3.03□□□□□ -1.92
CCDC187A0A096LP49 MIR1252-201ENST00000408861 65 ntBASIC3.03□□□□□ -1.92
CCDC187A0A096LP49 OSTCP8-201ENST00000445117 448 ntBASIC3.03□□□□□ -1.92
CCDC187A0A096LP49 ITCH-AS1-201ENST00000454205 299 ntTSL 5 BASIC3.03□□□□□ -1.92
CCDC187A0A096LP49 SNORD127-201ENST00000458892 86 ntBASIC3.03□□□□□ -1.92
CCDC187A0A096LP49 RNU6-1132P-201ENST00000459214 107 ntBASIC3.03□□□□□ -1.92
CCDC187A0A096LP49 CENPBD1P1-201ENST00000464061 469 ntBASIC3.03□□□□□ -1.92
CCDC187A0A096LP49 RPS27P26-201ENST00000494583 239 ntBASIC3.03□□□□□ -1.92
CCDC187A0A096LP49 AC114801.2-201ENST00000503825 781 ntBASIC3.03□□□□□ -1.92
CCDC187A0A096LP49 TGIF1P1-201ENST00000558095 802 ntBASIC3.03□□□□□ -1.92
CCDC187A0A096LP49 AC006023.1-201ENST00000603944 259 ntBASIC3.03□□□□□ -1.92
CCDC187A0A096LP49 Z98751.3-201ENST00000604447 521 ntBASIC3.03□□□□□ -1.92
CCDC187A0A096LP49 AL033523.1-201ENST00000605153 153 ntBASIC3.03□□□□□ -1.92
CCDC187A0A096LP49 AC107294.3-201ENST00000609211 526 ntBASIC3.03□□□□□ -1.92
CCDC187A0A096LP49 AC099654.7-201ENST00000635788 2127 ntBASIC3.03□□□□□ -1.92
CCDC187A0A096LP49 MIR622-201ENST00000638396 96 ntBASIC3.03□□□□□ -1.92
CCDC187A0A096LP49 EFR3A-202ENST00000519656 5247 ntTSL 1 (best) BASIC3.03□□□□□ -1.93
CCDC187A0A096LP49 CREBRF-201ENST00000296953 7778 ntAPPRIS P1 TSL 1 (best) BASIC3.03□□□□□ -1.93
CCDC187A0A096LP49 ZMYM1-210ENST00000611874 4466 ntAPPRIS P1 TSL 2 BASIC3.02□□□□□ -1.93
CCDC187A0A096LP49 AC004944.1-201ENST00000517807 3059 ntBASIC3.02□□□□□ -1.93
CCDC187A0A096LP49 ROS1-202ENST00000368508 7435 ntAPPRIS P2 TSL 1 (best) BASIC3.02□□□□□ -1.93
CCDC187A0A096LP49 LINC00890-202ENST00000569275 4595 ntAPPRIS P1 TSL 1 (best) BASIC3.02□□□□□ -1.93
CCDC187A0A096LP49 RNU6-858P-201ENST00000362436 107 ntBASIC3.02□□□□□ -1.93
CCDC187A0A096LP49 Y_RNA.26-201ENST00000362539 101 ntBASIC3.02□□□□□ -1.93
CCDC187A0A096LP49 Y_RNA.60-201ENST00000362831 98 ntBASIC3.02□□□□□ -1.93
CCDC187A0A096LP49 Y_RNA.210-201ENST00000364161 110 ntBASIC3.02□□□□□ -1.93
CCDC187A0A096LP49 Y_RNA.222-201ENST00000364264 102 ntBASIC3.02□□□□□ -1.93
CCDC187A0A096LP49 Y_RNA.288-201ENST00000364854 92 ntBASIC3.02□□□□□ -1.93
CCDC187A0A096LP49 Y_RNA.350-201ENST00000365409 98 ntBASIC3.02□□□□□ -1.93
CCDC187A0A096LP49 RNU6-805P-201ENST00000365643 106 ntBASIC3.02□□□□□ -1.93
CCDC187A0A096LP49 RNU2-49P-201ENST00000410666 184 ntBASIC3.02□□□□□ -1.93
CCDC187A0A096LP49 LINC00428-201ENST00000415620 227 ntTSL 5 BASIC3.02□□□□□ -1.93
CCDC187A0A096LP49 AC096649.2-201ENST00000416186 393 ntBASIC3.02□□□□□ -1.93
CCDC187A0A096LP49 AC093151.3-203ENST00000422305 514 ntTSL 3 BASIC3.02□□□□□ -1.93
CCDC187A0A096LP49 AC139712.2-201ENST00000424302 339 ntBASIC3.02□□□□□ -1.93
CCDC187A0A096LP49 AL591043.1-201ENST00000432461 424 ntBASIC3.02□□□□□ -1.93
CCDC187A0A096LP49 AC011816.1-201ENST00000441346 546 ntBASIC3.02□□□□□ -1.93
CCDC187A0A096LP49 FTH1P25-201ENST00000447665 469 ntBASIC3.02□□□□□ -1.93
CCDC187A0A096LP49 LINC01810-201ENST00000450397 411 ntTSL 3 BASIC3.02□□□□□ -1.93
CCDC187A0A096LP49 RPS4XP2-201ENST00000458402 793 ntBASIC3.02□□□□□ -1.93
CCDC187A0A096LP49 RN7SL442P-201ENST00000473804 320 ntBASIC3.02□□□□□ -1.93
CCDC187A0A096LP49 ACA59.1-201ENST00000515966 143 ntBASIC3.02□□□□□ -1.93
CCDC187A0A096LP49 ACA59.2-201ENST00000517061 156 ntBASIC3.02□□□□□ -1.93
CCDC187A0A096LP49 Y_RNA.715-201ENST00000517082 110 ntBASIC3.02□□□□□ -1.93
CCDC187A0A096LP49 EGLN3-AS1-201ENST00000555922 308 ntTSL 3 BASIC3.02□□□□□ -1.93
CCDC187A0A096LP49 LINC01195-201ENST00000570118 451 ntTSL 3 BASIC3.02□□□□□ -1.93
CCDC187A0A096LP49 AL122017.1-202ENST00000570612 319 ntTSL 5 BASIC3.02□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 101.6 ms