Protein–RNA interactions for Protein: S4R434

TMEM56-RWDD3, TMEM56-RWDD3 readthrough, humanhuman

Predictions only

Length 201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM56-RWDD3S4R434 SNORA12.2-201ENST00000391040 156 ntBASIC0.67□□□□□ -2.3
TMEM56-RWDD3S4R434 AL356776.1-201ENST00000406574 447 ntBASIC0.67□□□□□ -2.3
TMEM56-RWDD3S4R434 AC009411.1-202ENST00000412424 548 ntTSL 4 BASIC0.67□□□□□ -2.3
TMEM56-RWDD3S4R434 AC019070.1-201ENST00000415008 1024 ntBASIC0.67□□□□□ -2.3
TMEM56-RWDD3S4R434 snoU13.27-201ENST00000459278 104 ntBASIC0.67□□□□□ -2.3
TMEM56-RWDD3S4R434 COX6CP14-201ENST00000469580 174 ntBASIC0.67□□□□□ -2.3
TMEM56-RWDD3S4R434 AC111194.2-201ENST00000511222 455 ntTSL 5 BASIC0.67□□□□□ -2.3
TMEM56-RWDD3S4R434 PCAT4-202ENST00000514836 373 ntTSL 3 BASIC0.67□□□□□ -2.3
TMEM56-RWDD3S4R434 RNA5SP458-201ENST00000516188 119 ntBASIC0.67□□□□□ -2.3
TMEM56-RWDD3S4R434 IL7-206ENST00000520269 456 ntTSL 3 BASIC0.67□□□□□ -2.3
TMEM56-RWDD3S4R434 AC008088.1-201ENST00000580993 280 ntBASIC0.67□□□□□ -2.3
TMEM56-RWDD3S4R434 AC104984.5-201ENST00000586878 94 ntBASIC0.67□□□□□ -2.3
TMEM56-RWDD3S4R434 BNIP3P8-201ENST00000597863 560 ntBASIC0.67□□□□□ -2.3
TMEM56-RWDD3S4R434 AC092106.3-201ENST00000611308 722 ntBASIC0.67□□□□□ -2.3
TMEM56-RWDD3S4R434 AL138955.1-201ENST00000622881 1040 ntBASIC0.67□□□□□ -2.3
TMEM56-RWDD3S4R434 AL353651.2-201ENST00000635706 559 ntTSL 5 BASIC0.67□□□□□ -2.3
TMEM56-RWDD3S4R434 AC068647.2-201ENST00000637380 353 ntBASIC0.67□□□□□ -2.3
TMEM56-RWDD3S4R434 AC008163.1-202ENST00000636004 2889 ntBASIC0.67□□□□□ -2.3
TMEM56-RWDD3S4R434 AL445523.1-201ENST00000451184 1362 ntBASIC0.67□□□□□ -2.3
TMEM56-RWDD3S4R434 RNY4P24-201ENST00000362735 96 ntBASIC0.66□□□□□ -2.3
TMEM56-RWDD3S4R434 RNU6-527P-201ENST00000363425 104 ntBASIC0.66□□□□□ -2.3
TMEM56-RWDD3S4R434 RNU1-96P-201ENST00000364163 162 ntBASIC0.66□□□□□ -2.3
TMEM56-RWDD3S4R434 SNORD116.1-201ENST00000365628 92 ntBASIC0.66□□□□□ -2.3
TMEM56-RWDD3S4R434 SNORA32.2-201ENST00000384049 122 ntBASIC0.66□□□□□ -2.3
TMEM56-RWDD3S4R434 MIR515-2-201ENST00000384883 83 ntBASIC0.66□□□□□ -2.3
TMEM56-RWDD3S4R434 MIR515-1-201ENST00000384884 83 ntBASIC0.66□□□□□ -2.3
TMEM56-RWDD3S4R434 NPS-201ENST00000398023 270 ntAPPRIS P1 TSL 5 BASIC0.66□□□□□ -2.3
TMEM56-RWDD3S4R434 MAGI2-AS2-201ENST00000411616 476 ntTSL 2 BASIC0.66□□□□□ -2.3
TMEM56-RWDD3S4R434 AL031779.1-201ENST00000415663 330 ntBASIC0.66□□□□□ -2.3
TMEM56-RWDD3S4R434 AL137856.1-202ENST00000418238 422 ntTSL 3 BASIC0.66□□□□□ -2.3
TMEM56-RWDD3S4R434 ARL5AP1-201ENST00000418991 388 ntBASIC0.66□□□□□ -2.3
TMEM56-RWDD3S4R434 AC006366.1-201ENST00000422002 759 ntBASIC0.66□□□□□ -2.3
TMEM56-RWDD3S4R434 AL606490.4-201ENST00000423117 127 ntBASIC0.66□□□□□ -2.3
TMEM56-RWDD3S4R434 AL161935.3-201ENST00000433770 347 ntTSL 2 BASIC0.66□□□□□ -2.3
TMEM56-RWDD3S4R434 ZNF736P5Y-201ENST00000451173 805 ntBASIC0.66□□□□□ -2.3
TMEM56-RWDD3S4R434 AL358075.2-201ENST00000452785 339 ntTSL 2 BASIC0.66□□□□□ -2.3
TMEM56-RWDD3S4R434 AC022447.4-201ENST00000504053 364 ntBASIC0.66□□□□□ -2.3
TMEM56-RWDD3S4R434 AC145146.2-202ENST00000508118 326 ntTSL 3 BASIC0.66□□□□□ -2.3
TMEM56-RWDD3S4R434 KRTAP13-6P-201ENST00000508999 371 ntBASIC0.66□□□□□ -2.3
TMEM56-RWDD3S4R434 RNU1-86P-201ENST00000516108 154 ntBASIC0.66□□□□□ -2.3
TMEM56-RWDD3S4R434 SNORA19.3-201ENST00000516165 130 ntBASIC0.66□□□□□ -2.3
TMEM56-RWDD3S4R434 RNU1-107P-201ENST00000516617 154 ntBASIC0.66□□□□□ -2.3
TMEM56-RWDD3S4R434 AP000755.2-201ENST00000526777 571 ntTSL 5 BASIC0.66□□□□□ -2.3
TMEM56-RWDD3S4R434 AC011979.2-201ENST00000527568 352 ntBASIC0.66□□□□□ -2.3
TMEM56-RWDD3S4R434 AP002453.2-201ENST00000533503 320 ntBASIC0.66□□□□□ -2.3
TMEM56-RWDD3S4R434 ADI1P3-201ENST00000549509 470 ntBASIC0.66□□□□□ -2.3
TMEM56-RWDD3S4R434 AL512791.1-201ENST00000555853 300 ntTSL 3 BASIC0.66□□□□□ -2.3
TMEM56-RWDD3S4R434 AC098848.2-201ENST00000588023 330 ntBASIC0.66□□□□□ -2.3
TMEM56-RWDD3S4R434 AC110760.3-201ENST00000598794 467 ntBASIC0.66□□□□□ -2.3
TMEM56-RWDD3S4R434 snoU13.31-201ENST00000607291 104 ntBASIC0.66□□□□□ -2.3
TMEM56-RWDD3S4R434 DCAF17-212ENST00000611110 975 ntTSL 1 (best) BASIC0.66□□□□□ -2.3
TMEM56-RWDD3S4R434 MIR6857-201ENST00000613267 93 ntBASIC0.66□□□□□ -2.3
TMEM56-RWDD3S4R434 AC040896.1-201ENST00000613819 479 ntBASIC0.66□□□□□ -2.3
TMEM56-RWDD3S4R434 AC097372.5-201ENST00000623665 376 ntBASIC0.66□□□□□ -2.3
TMEM56-RWDD3S4R434 RNU5E-7P-201ENST00000365290 117 ntBASIC0.65□□□□□ -2.31
TMEM56-RWDD3S4R434 MIR222-201ENST00000384992 110 ntBASIC0.65□□□□□ -2.31
TMEM56-RWDD3S4R434 RNU2-72P-201ENST00000411175 163 ntBASIC0.65□□□□□ -2.31
TMEM56-RWDD3S4R434 AC091705.1-201ENST00000412197 209 ntTSL 5 BASIC0.65□□□□□ -2.31
TMEM56-RWDD3S4R434 MTCO3P29-201ENST00000432119 779 ntBASIC0.65□□□□□ -2.31
TMEM56-RWDD3S4R434 AC099566.1-212ENST00000451675 799 ntTSL 3 BASIC0.65□□□□□ -2.31
TMEM56-RWDD3S4R434 ODF2L-216ENST00000486215 311 ntTSL 2 BASIC0.65□□□□□ -2.31
TMEM56-RWDD3S4R434 TRBVA-201ENST00000498804 316 ntBASIC0.65□□□□□ -2.31
TMEM56-RWDD3S4R434 AC093893.1-201ENST00000505781 510 ntTSL 5 BASIC0.65□□□□□ -2.31
TMEM56-RWDD3S4R434 PSMC1P5-201ENST00000512850 177 ntBASIC0.65□□□□□ -2.31
TMEM56-RWDD3S4R434 LINC01218-201ENST00000515150 481 ntTSL 3 BASIC0.65□□□□□ -2.31
TMEM56-RWDD3S4R434 RNU6-276P-201ENST00000516114 96 ntBASIC0.65□□□□□ -2.31
TMEM56-RWDD3S4R434 MTND2P7-201ENST00000521337 640 ntBASIC0.65□□□□□ -2.31
TMEM56-RWDD3S4R434 AC107934.1-201ENST00000522215 217 ntBASIC0.65□□□□□ -2.31
TMEM56-RWDD3S4R434 AC009930.1-201ENST00000522330 191 ntTSL 5 BASIC0.65□□□□□ -2.31
TMEM56-RWDD3S4R434 XIRP2-AS1-201ENST00000525330 776 ntTSL 3 BASIC0.65□□□□□ -2.31
TMEM56-RWDD3S4R434 AC138625.2-201ENST00000563968 551 ntTSL 3 BASIC0.65□□□□□ -2.31
TMEM56-RWDD3S4R434 AC109446.1-201ENST00000566172 220 ntBASIC0.65□□□□□ -2.31
TMEM56-RWDD3S4R434 PNRC2-204ENST00000579103 171 ntTSL 2 BASIC0.65□□□□□ -2.31
TMEM56-RWDD3S4R434 AL606834.3-201ENST00000602615 496 ntBASIC0.65□□□□□ -2.31
TMEM56-RWDD3S4R434 AC107304.1-201ENST00000604229 296 ntBASIC0.65□□□□□ -2.31
TMEM56-RWDD3S4R434 AC080078.3-201ENST00000605407 463 ntBASIC0.65□□□□□ -2.31
TMEM56-RWDD3S4R434 SNORD98-201ENST00000636377 67 ntBASIC0.65□□□□□ -2.31
TMEM56-RWDD3S4R434 HIF1A-204ENST00000539097 3956 ntTSL 1 (best) BASIC0.65□□□□□ -2.31
TMEM56-RWDD3S4R434 AC099786.3-201ENST00000565735 1410 ntBASIC0.64□□□□□ -2.31
TMEM56-RWDD3S4R434 RNU6-142P-201ENST00000384019 107 ntBASIC0.64□□□□□ -2.31
TMEM56-RWDD3S4R434 MIR100-201ENST00000385259 80 ntBASIC0.64□□□□□ -2.31
TMEM56-RWDD3S4R434 AC010099.3-201ENST00000423896 409 ntBASIC0.64□□□□□ -2.31
TMEM56-RWDD3S4R434 AC009313.1-201ENST00000425470 503 ntTSL 3 BASIC0.64□□□□□ -2.31
TMEM56-RWDD3S4R434 MTCYBP39-201ENST00000437562 491 ntBASIC0.64□□□□□ -2.31
TMEM56-RWDD3S4R434 MTND5P2-201ENST00000442927 1142 ntBASIC0.64□□□□□ -2.31
TMEM56-RWDD3S4R434 AL360271.2-201ENST00000447710 161 ntBASIC0.64□□□□□ -2.31
TMEM56-RWDD3S4R434 TOMM22P6-201ENST00000465035 409 ntBASIC0.64□□□□□ -2.31
TMEM56-RWDD3S4R434 RPS26P45-201ENST00000471748 340 ntBASIC0.64□□□□□ -2.31
TMEM56-RWDD3S4R434 AC104806.1-201ENST00000508720 308 ntBASIC0.64□□□□□ -2.31
TMEM56-RWDD3S4R434 LINC02465-202ENST00000508724 503 ntTSL 3 BASIC0.64□□□□□ -2.31
TMEM56-RWDD3S4R434 AC079349.1-201ENST00000509096 589 ntTSL 2 BASIC0.64□□□□□ -2.31
TMEM56-RWDD3S4R434 AC008852.1-201ENST00000510198 451 ntTSL 2 BASIC0.64□□□□□ -2.31
TMEM56-RWDD3S4R434 RNU6-123P-201ENST00000516163 102 ntBASIC0.64□□□□□ -2.31
TMEM56-RWDD3S4R434 RNU7-51P-201ENST00000516560 62 ntBASIC0.64□□□□□ -2.31
TMEM56-RWDD3S4R434 LINC02055-204ENST00000521034 432 ntTSL 5 BASIC0.64□□□□□ -2.31
TMEM56-RWDD3S4R434 AC136628.3-201ENST00000521868 290 ntBASIC0.64□□□□□ -2.31
TMEM56-RWDD3S4R434 AP003969.1-201ENST00000531846 400 ntTSL 2 BASIC0.64□□□□□ -2.31
TMEM56-RWDD3S4R434 CBX3P8-201ENST00000532412 525 ntBASIC0.64□□□□□ -2.31
TMEM56-RWDD3S4R434 SNORA59B-202ENST00000578183 701 ntBASIC0.64□□□□□ -2.31
TMEM56-RWDD3S4R434 AP005136.1-201ENST00000579765 429 ntBASIC0.64□□□□□ -2.31
Retrieved 100 of 98,524 protein–RNA pairs in 143.3 ms