Protein–RNA interactions for Protein: Q9Y6N9

USH1C, Harmonin, humanhuman

Predictions only

Length 552 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USH1CQ9Y6N9 AC104073.3-201ENST00000610942 955 ntBASIC1.13□□□□□ -2.23
USH1CQ9Y6N9 RMST_4.1-201ENST00000616886 107 ntBASIC1.13□□□□□ -2.23
USH1CQ9Y6N9 AL353770.2-201ENST00000620024 78 ntBASIC1.13□□□□□ -2.23
USH1CQ9Y6N9 AL121890.5-201ENST00000620848 304 ntBASIC1.13□□□□□ -2.23
USH1CQ9Y6N9 AP002371.2-201ENST00000624450 503 ntBASIC1.13□□□□□ -2.23
USH1CQ9Y6N9 RNU4-15P-201ENST00000362613 141 ntBASIC1.12□□□□□ -2.23
USH1CQ9Y6N9 RNU6-392P-201ENST00000364926 101 ntBASIC1.12□□□□□ -2.23
USH1CQ9Y6N9 MIR513A1-201ENST00000385138 129 ntBASIC1.12□□□□□ -2.23
USH1CQ9Y6N9 SNORD115.1-201ENST00000391109 76 ntBASIC1.12□□□□□ -2.23
USH1CQ9Y6N9 OR6C66P-201ENST00000414917 930 ntBASIC1.12□□□□□ -2.23
USH1CQ9Y6N9 AC010967.1-201ENST00000421575 489 ntTSL 5 BASIC1.12□□□□□ -2.23
USH1CQ9Y6N9 MS4A4E-203ENST00000425663 350 ntTSL 1 (best) BASIC1.12□□□□□ -2.23
USH1CQ9Y6N9 NAALADL2-AS1-201ENST00000426315 804 ntTSL 5 BASIC1.12□□□□□ -2.23
USH1CQ9Y6N9 CALM2P2-201ENST00000428512 440 ntBASIC1.12□□□□□ -2.23
USH1CQ9Y6N9 MYCBP2-AS2-201ENST00000428716 428 ntTSL 5 BASIC1.12□□□□□ -2.23
USH1CQ9Y6N9 RPS24P1-201ENST00000438550 371 ntBASIC1.12□□□□□ -2.23
USH1CQ9Y6N9 AC145146.1-201ENST00000496370 254 ntBASIC1.12□□□□□ -2.23
USH1CQ9Y6N9 AF131216.2-201ENST00000512316 564 ntBASIC1.12□□□□□ -2.23
USH1CQ9Y6N9 AC027701.1-201ENST00000520155 823 ntTSL 3 BASIC1.12□□□□□ -2.23
USH1CQ9Y6N9 RPL21P5-201ENST00000554662 472 ntBASIC1.12□□□□□ -2.23
USH1CQ9Y6N9 HMGB1P33-201ENST00000563485 527 ntBASIC1.12□□□□□ -2.23
USH1CQ9Y6N9 MIR5697-201ENST00000578045 78 ntBASIC1.12□□□□□ -2.23
USH1CQ9Y6N9 AC008521.1-201ENST00000587471 187 ntBASIC1.12□□□□□ -2.23
USH1CQ9Y6N9 AC073413.2-201ENST00000604332 360 ntBASIC1.12□□□□□ -2.23
USH1CQ9Y6N9 AL034555.1-201ENST00000604816 211 ntBASIC1.12□□□□□ -2.23
USH1CQ9Y6N9 AC018889.1-201ENST00000605372 397 ntBASIC1.12□□□□□ -2.23
USH1CQ9Y6N9 AC006927.4-201ENST00000639187 543 ntBASIC1.12□□□□□ -2.23
USH1CQ9Y6N9 ZNF518A-210ENST00000624776 7994 ntAPPRIS P1 TSL 1 (best) BASIC1.12□□□□□ -2.23
USH1CQ9Y6N9 ICE2P2-201ENST00000483823 2787 ntBASIC1.12□□□□□ -2.23
USH1CQ9Y6N9 AC007370.2-201ENST00000506899 2694 ntTSL 5 BASIC1.12□□□□□ -2.23
USH1CQ9Y6N9 AL589740.1-207ENST00000607823 1962 ntTSL 5 BASIC1.11□□□□□ -2.23
USH1CQ9Y6N9 RNU4-1-201ENST00000363925 141 ntBASIC1.11□□□□□ -2.23
USH1CQ9Y6N9 SNORD1A-201ENST00000364968 72 ntBASIC1.11□□□□□ -2.23
USH1CQ9Y6N9 SNORA25.9-201ENST00000365087 128 ntBASIC1.11□□□□□ -2.23
USH1CQ9Y6N9 RNU6-26P-201ENST00000383985 107 ntBASIC1.11□□□□□ -2.23
USH1CQ9Y6N9 RNU6-1200P-201ENST00000384162 107 ntBASIC1.11□□□□□ -2.23
USH1CQ9Y6N9 RNU6-296P-201ENST00000384608 107 ntBASIC1.11□□□□□ -2.23
USH1CQ9Y6N9 MRPL42P2-201ENST00000403169 426 ntBASIC1.11□□□□□ -2.23
USH1CQ9Y6N9 MTCYBP36-201ENST00000404146 440 ntBASIC1.11□□□□□ -2.23
USH1CQ9Y6N9 MIR1287-201ENST00000408492 90 ntBASIC1.11□□□□□ -2.23
USH1CQ9Y6N9 RNU6-1245P-201ENST00000411130 106 ntBASIC1.11□□□□□ -2.23
USH1CQ9Y6N9 SNRPG-202ENST00000413456 398 ntTSL 3 BASIC1.11□□□□□ -2.23
USH1CQ9Y6N9 UBE2V1P8-201ENST00000437166 265 ntBASIC1.11□□□□□ -2.23
USH1CQ9Y6N9 JTBP1-201ENST00000441314 247 ntBASIC1.11□□□□□ -2.23
USH1CQ9Y6N9 MTCO2P29-201ENST00000465212 189 ntBASIC1.11□□□□□ -2.23
USH1CQ9Y6N9 MTND3P5-201ENST00000512798 333 ntBASIC1.11□□□□□ -2.23
USH1CQ9Y6N9 AP003181.2-201ENST00000528941 181 ntBASIC1.11□□□□□ -2.23
USH1CQ9Y6N9 AC090592.1-203ENST00000533942 575 ntTSL 3 BASIC1.11□□□□□ -2.23
USH1CQ9Y6N9 AC105129.3-201ENST00000605455 485 ntBASIC1.11□□□□□ -2.23
USH1CQ9Y6N9 AC103810.9-201ENST00000606688 112 ntBASIC1.11□□□□□ -2.23
USH1CQ9Y6N9 AC245297.3-203ENST00000612135 405 ntTSL 5 BASIC1.11□□□□□ -2.23
USH1CQ9Y6N9 MIR8070-201ENST00000616510 88 ntBASIC1.11□□□□□ -2.23
USH1CQ9Y6N9 PLD1-217ENST00000627725 174 ntTSL 5 BASIC1.11□□□□□ -2.23
USH1CQ9Y6N9 AL445984.1-201ENST00000637834 659 ntBASIC1.11□□□□□ -2.23
USH1CQ9Y6N9 SNORA25.8-201ENST00000364831 128 ntBASIC1.1□□□□□ -2.23
USH1CQ9Y6N9 MIR499A-201ENST00000384903 122 ntBASIC1.1□□□□□ -2.23
USH1CQ9Y6N9 MIR558-201ENST00000384920 94 ntBASIC1.1□□□□□ -2.23
USH1CQ9Y6N9 RNU6-1176P-201ENST00000390955 107 ntBASIC1.1□□□□□ -2.23
USH1CQ9Y6N9 ELOCP4-201ENST00000420090 333 ntBASIC1.1□□□□□ -2.23
USH1CQ9Y6N9 AC123900.1-201ENST00000420390 96 ntBASIC1.1□□□□□ -2.23
USH1CQ9Y6N9 MED13P1-201ENST00000428342 171 ntBASIC1.1□□□□□ -2.23
USH1CQ9Y6N9 TAF9P1-201ENST00000445421 515 ntBASIC1.1□□□□□ -2.23
USH1CQ9Y6N9 RPS27AP8-201ENST00000452665 445 ntBASIC1.1□□□□□ -2.23
USH1CQ9Y6N9 TAF9P2-201ENST00000454958 515 ntBASIC1.1□□□□□ -2.23
USH1CQ9Y6N9 AC022445.1-201ENST00000457499 408 ntTSL 3 BASIC1.1□□□□□ -2.23
USH1CQ9Y6N9 RNA5SP269-201ENST00000459032 137 ntBASIC1.1□□□□□ -2.23
USH1CQ9Y6N9 TOMM22P6-201ENST00000465035 409 ntBASIC1.1□□□□□ -2.23
USH1CQ9Y6N9 SNRPGP7-201ENST00000469016 106 ntBASIC1.1□□□□□ -2.23
USH1CQ9Y6N9 RPL26P26-201ENST00000480251 434 ntBASIC1.1□□□□□ -2.23
USH1CQ9Y6N9 RPL36AP21-201ENST00000490372 323 ntBASIC1.1□□□□□ -2.23
USH1CQ9Y6N9 MTND3P25-201ENST00000509243 135 ntBASIC1.1□□□□□ -2.23
USH1CQ9Y6N9 AP001893.2-201ENST00000526949 202 ntBASIC1.1□□□□□ -2.23
USH1CQ9Y6N9 AC084364.2-201ENST00000546924 395 ntBASIC1.1□□□□□ -2.23
USH1CQ9Y6N9 AC009135.1-201ENST00000549303 776 ntTSL 2 BASIC1.1□□□□□ -2.23
USH1CQ9Y6N9 AC087883.1-201ENST00000551882 391 ntBASIC1.1□□□□□ -2.23
USH1CQ9Y6N9 AC090888.2-201ENST00000559765 1144 ntBASIC1.1□□□□□ -2.23
USH1CQ9Y6N9 AC002558.3-201ENST00000574021 401 ntTSL 3 BASIC1.1□□□□□ -2.23
USH1CQ9Y6N9 AC032019.2-201ENST00000584916 403 ntTSL 5 BASIC1.1□□□□□ -2.23
USH1CQ9Y6N9 RNU6-87P-201ENST00000607561 108 ntBASIC1.1□□□□□ -2.23
USH1CQ9Y6N9 MIR6078-201ENST00000611069 100 ntBASIC1.1□□□□□ -2.23
USH1CQ9Y6N9 AL359740.1-201ENST00000624340 592 ntBASIC1.1□□□□□ -2.23
USH1CQ9Y6N9 MTND5P9-201ENST00000503854 1755 ntBASIC1.1□□□□□ -2.23
USH1CQ9Y6N9 AC100821.1-201ENST00000523153 2479 ntBASIC1.1□□□□□ -2.23
USH1CQ9Y6N9 RNU6-1285P-201ENST00000363480 105 ntBASIC1.09□□□□□ -2.23
USH1CQ9Y6N9 MTCO3P41-201ENST00000414801 328 ntBASIC1.09□□□□□ -2.23
USH1CQ9Y6N9 AC139712.2-201ENST00000424302 339 ntBASIC1.09□□□□□ -2.23
USH1CQ9Y6N9 RPS27P16-201ENST00000425758 201 ntBASIC1.09□□□□□ -2.23
USH1CQ9Y6N9 AL136980.1-201ENST00000426764 543 ntTSL 3 BASIC1.09□□□□□ -2.23
USH1CQ9Y6N9 AC000111.3-201ENST00000433478 193 ntBASIC1.09□□□□□ -2.23
USH1CQ9Y6N9 HSPE1P9-201ENST00000440046 311 ntBASIC1.09□□□□□ -2.23
USH1CQ9Y6N9 SNRPEP8-201ENST00000442866 260 ntBASIC1.09□□□□□ -2.23
USH1CQ9Y6N9 AL138799.4-201ENST00000443939 643 ntTSL 3 BASIC1.09□□□□□ -2.23
USH1CQ9Y6N9 AC015983.2-201ENST00000446053 472 ntTSL 3 BASIC1.09□□□□□ -2.23
USH1CQ9Y6N9 LINC00571-203ENST00000454060 525 ntTSL 3 BASIC1.09□□□□□ -2.23
USH1CQ9Y6N9 AL049829.1-201ENST00000465411 156 ntBASIC1.09□□□□□ -2.23
USH1CQ9Y6N9 APELA-204ENST00000515275 551 ntAPPRIS P1 TSL 3 BASIC1.09□□□□□ -2.23
USH1CQ9Y6N9 SUMO2P18-201ENST00000518873 252 ntBASIC1.09□□□□□ -2.23
USH1CQ9Y6N9 AC025524.2-207ENST00000520097 506 ntTSL 3 BASIC1.09□□□□□ -2.23
USH1CQ9Y6N9 LINC02305-201ENST00000554142 476 ntTSL 3 BASIC1.09□□□□□ -2.23
USH1CQ9Y6N9 AC005668.1-201ENST00000571142 476 ntBASIC1.09□□□□□ -2.23
Retrieved 100 of 98,524 protein–RNA pairs in 218.5 ms