Protein–RNA interactions for Protein: Q9Y5X4

NR2E3, Photoreceptor-specific nuclear receptor, humanhuman

Predictions only

Length 410 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR2E3Q9Y5X4 AC008264.2-201ENST00000610193 3731 ntBASIC3.4□□□□□ -1.87
NR2E3Q9Y5X4 OR6C1-202ENST00000642104 2055 ntAPPRIS P1 BASIC3.39□□□□□ -1.87
NR2E3Q9Y5X4 RPL9P7-201ENST00000330965 580 ntBASIC3.39□□□□□ -1.87
NR2E3Q9Y5X4 U8.2-201ENST00000363156 134 ntBASIC3.39□□□□□ -1.87
NR2E3Q9Y5X4 RNU6-105P-201ENST00000363909 104 ntBASIC3.39□□□□□ -1.87
NR2E3Q9Y5X4 RNU6-336P-201ENST00000364891 107 ntBASIC3.39□□□□□ -1.87
NR2E3Q9Y5X4 RNY1P14-201ENST00000384426 108 ntBASIC3.39□□□□□ -1.87
NR2E3Q9Y5X4 AL162411.1-201ENST00000413145 526 ntTSL 2 BASIC3.39□□□□□ -1.87
NR2E3Q9Y5X4 AL358176.2-201ENST00000425769 204 ntBASIC3.39□□□□□ -1.87
NR2E3Q9Y5X4 USMG5P1-201ENST00000425964 177 ntBASIC3.39□□□□□ -1.87
NR2E3Q9Y5X4 AL445488.1-202ENST00000430623 545 ntTSL 3 BASIC3.39□□□□□ -1.87
NR2E3Q9Y5X4 AL133396.1-201ENST00000432048 687 ntBASIC3.39□□□□□ -1.87
NR2E3Q9Y5X4 AC087499.2-201ENST00000432861 149 ntBASIC3.39□□□□□ -1.87
NR2E3Q9Y5X4 AL160004.2-201ENST00000432935 350 ntBASIC3.39□□□□□ -1.87
NR2E3Q9Y5X4 MTND3P2-201ENST00000438452 342 ntBASIC3.39□□□□□ -1.87
NR2E3Q9Y5X4 AL513043.1-201ENST00000439124 535 ntBASIC3.39□□□□□ -1.87
NR2E3Q9Y5X4 AL513328.1-201ENST00000446460 224 ntBASIC3.39□□□□□ -1.87
NR2E3Q9Y5X4 RPL9P9-202ENST00000466501 579 ntBASIC3.39□□□□□ -1.87
NR2E3Q9Y5X4 AC074033.2-201ENST00000480669 535 ntTSL 3 BASIC3.39□□□□□ -1.87
NR2E3Q9Y5X4 RPL23AP49-201ENST00000492925 468 ntBASIC3.39□□□□□ -1.87
NR2E3Q9Y5X4 AC021146.2-201ENST00000504736 556 ntBASIC3.39□□□□□ -1.87
NR2E3Q9Y5X4 RNU6-699P-201ENST00000517081 110 ntBASIC3.39□□□□□ -1.87
NR2E3Q9Y5X4 RNU6-988P-201ENST00000519081 107 ntBASIC3.39□□□□□ -1.87
NR2E3Q9Y5X4 AC104027.1-201ENST00000521887 300 ntBASIC3.39□□□□□ -1.87
NR2E3Q9Y5X4 OR56A5-202ENST00000532411 942 ntAPPRIS P1 BASIC3.39□□□□□ -1.87
NR2E3Q9Y5X4 LINC02425-201ENST00000536217 376 ntTSL 3 BASIC3.39□□□□□ -1.87
NR2E3Q9Y5X4 AC107016.2-201ENST00000547968 190 ntBASIC3.39□□□□□ -1.87
NR2E3Q9Y5X4 LINC02309-201ENST00000553679 207 ntTSL 3 BASIC3.39□□□□□ -1.87
NR2E3Q9Y5X4 AC025281.1-201ENST00000567026 265 ntBASIC3.39□□□□□ -1.87
NR2E3Q9Y5X4 MIR4680-201ENST00000580906 66 ntBASIC3.39□□□□□ -1.87
NR2E3Q9Y5X4 LUZP6-201ENST00000589735 177 ntAPPRIS P1 BASIC3.39□□□□□ -1.87
NR2E3Q9Y5X4 AL158827.2-201ENST00000602494 330 ntBASIC3.39□□□□□ -1.87
NR2E3Q9Y5X4 ESRRAP2-204ENST00000606337 280 ntTSL 5 BASIC3.39□□□□□ -1.87
NR2E3Q9Y5X4 PISRT1.1-201ENST00000616930 107 ntBASIC3.39□□□□□ -1.87
NR2E3Q9Y5X4 AL691447.3-201ENST00000635020 330 ntBASIC3.39□□□□□ -1.87
NR2E3Q9Y5X4 AC008669.1-201ENST00000565823 2178 ntBASIC3.39□□□□□ -1.87
NR2E3Q9Y5X4 AGTR1-204ENST00000418473 2071 ntTSL 5 BASIC3.39□□□□□ -1.87
NR2E3Q9Y5X4 AC100800.1-201ENST00000524252 2054 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
NR2E3Q9Y5X4 AC093725.1-201ENST00000508135 2672 ntTSL 5 BASIC3.38□□□□□ -1.87
NR2E3Q9Y5X4 PTBP2-211ENST00000609116 12014 ntAPPRIS ALT1 TSL 1 (best) BASIC3.38□□□□□ -1.87
NR2E3Q9Y5X4 RNU1-105P-201ENST00000363470 161 ntBASIC3.38□□□□□ -1.87
NR2E3Q9Y5X4 RNU6-1317P-201ENST00000364582 104 ntBASIC3.38□□□□□ -1.87
NR2E3Q9Y5X4 RNU6-790P-201ENST00000384479 105 ntBASIC3.38□□□□□ -1.87
NR2E3Q9Y5X4 SNORD116-20-201ENST00000384529 92 ntBASIC3.38□□□□□ -1.87
NR2E3Q9Y5X4 RNU6-174P-201ENST00000410406 106 ntBASIC3.38□□□□□ -1.87
NR2E3Q9Y5X4 RNU2-49P-201ENST00000410666 184 ntBASIC3.38□□□□□ -1.87
NR2E3Q9Y5X4 AC083867.1-201ENST00000413567 457 ntTSL 3 BASIC3.38□□□□□ -1.87
NR2E3Q9Y5X4 AC069257.1-202ENST00000425275 422 ntTSL 3 BASIC3.38□□□□□ -1.87
NR2E3Q9Y5X4 TRIAP1P1-201ENST00000427062 225 ntBASIC3.38□□□□□ -1.87
NR2E3Q9Y5X4 AC114801.2-201ENST00000503825 781 ntBASIC3.38□□□□□ -1.87
NR2E3Q9Y5X4 LINC02494-201ENST00000509824 427 ntTSL 3 BASIC3.38□□□□□ -1.87
NR2E3Q9Y5X4 ACA59.2-201ENST00000517061 156 ntBASIC3.38□□□□□ -1.87
NR2E3Q9Y5X4 SCARNA20.6-201ENST00000517251 106 ntBASIC3.38□□□□□ -1.87
NR2E3Q9Y5X4 LINC01195-201ENST00000570118 451 ntTSL 3 BASIC3.38□□□□□ -1.87
NR2E3Q9Y5X4 AC009163.5-201ENST00000575421 637 ntBASIC3.38□□□□□ -1.87
NR2E3Q9Y5X4 MIR4506-201ENST00000584693 77 ntBASIC3.38□□□□□ -1.87
NR2E3Q9Y5X4 BNIP3P16-201ENST00000589779 534 ntBASIC3.38□□□□□ -1.87
NR2E3Q9Y5X4 AC018889.1-201ENST00000605372 397 ntBASIC3.38□□□□□ -1.87
NR2E3Q9Y5X4 AC008121.3-201ENST00000618726 433 ntBASIC3.38□□□□□ -1.87
NR2E3Q9Y5X4 LMBRD1-201ENST00000370570 2099 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
NR2E3Q9Y5X4 ELF1-201ENST00000239882 3566 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
NR2E3Q9Y5X4 SYNE2-212ENST00000554584 20508 ntTSL 5 BASIC3.38□□□□□ -1.87
NR2E3Q9Y5X4 HAUS6P2-201ENST00000433254 2404 ntBASIC3.38□□□□□ -1.87
NR2E3Q9Y5X4 BCHE-201ENST00000264381 2454 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
NR2E3Q9Y5X4 SNHG14-215ENST00000551631 4008 ntTSL 5 BASIC3.37□□□□□ -1.87
NR2E3Q9Y5X4 OR5K1-202ENST00000642057 3466 ntAPPRIS P1 BASIC3.37□□□□□ -1.87
NR2E3Q9Y5X4 RNU6-858P-201ENST00000362436 107 ntBASIC3.37□□□□□ -1.87
NR2E3Q9Y5X4 RNU6-527P-201ENST00000363425 104 ntBASIC3.37□□□□□ -1.87
NR2E3Q9Y5X4 Y_RNA.238-201ENST00000364441 102 ntBASIC3.37□□□□□ -1.87
NR2E3Q9Y5X4 RNU6-1105P-201ENST00000384774 107 ntBASIC3.37□□□□□ -1.87
NR2E3Q9Y5X4 RNU6-750P-201ENST00000390946 107 ntBASIC3.37□□□□□ -1.87
NR2E3Q9Y5X4 AL513475.1-201ENST00000406602 315 ntBASIC3.37□□□□□ -1.87
NR2E3Q9Y5X4 RN7SKP123-201ENST00000410732 291 ntBASIC3.37□□□□□ -1.87
NR2E3Q9Y5X4 RNA5SP247-201ENST00000411181 105 ntBASIC3.37□□□□□ -1.87
NR2E3Q9Y5X4 LINC01402-201ENST00000422226 279 ntTSL 3 BASIC3.37□□□□□ -1.87
NR2E3Q9Y5X4 AL591043.1-201ENST00000432461 424 ntBASIC3.37□□□□□ -1.87
NR2E3Q9Y5X4 snoU13.23-201ENST00000458863 104 ntBASIC3.37□□□□□ -1.87
NR2E3Q9Y5X4 MED28P2-201ENST00000475771 317 ntBASIC3.37□□□□□ -1.87
NR2E3Q9Y5X4 RNU4ATAC7P-201ENST00000516280 125 ntBASIC3.37□□□□□ -1.87
NR2E3Q9Y5X4 MIR3529-201ENST00000637713 78 ntBASIC3.37□□□□□ -1.87
NR2E3Q9Y5X4 TFEC-203ENST00000393485 2704 ntTSL 2 BASIC3.37□□□□□ -1.87
NR2E3Q9Y5X4 HTR2B-201ENST00000258400 2246 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
NR2E3Q9Y5X4 MCMDC2-201ENST00000313616 2043 ntTSL 2 BASIC3.36□□□□□ -1.87
NR2E3Q9Y5X4 AL021368.2-201ENST00000606125 5352 ntBASIC3.36□□□□□ -1.87
NR2E3Q9Y5X4 AC010889.1-201ENST00000566193 2666 ntBASIC3.36□□□□□ -1.87
NR2E3Q9Y5X4 ZBTB8OSP1-201ENST00000342688 498 ntBASIC3.36□□□□□ -1.87
NR2E3Q9Y5X4 RNU6-596P-201ENST00000365395 98 ntBASIC3.36□□□□□ -1.87
NR2E3Q9Y5X4 SNORA41-201ENST00000384675 132 ntBASIC3.36□□□□□ -1.87
NR2E3Q9Y5X4 MIR548F4-201ENST00000408515 105 ntBASIC3.36□□□□□ -1.87
NR2E3Q9Y5X4 HNRNPDLP1-201ENST00000412834 550 ntBASIC3.36□□□□□ -1.87
NR2E3Q9Y5X4 LINC01344-201ENST00000420760 261 ntTSL 3 BASIC3.36□□□□□ -1.87
NR2E3Q9Y5X4 AC093151.3-203ENST00000422305 514 ntTSL 3 BASIC3.36□□□□□ -1.87
NR2E3Q9Y5X4 AC008267.5-201ENST00000424928 265 ntBASIC3.36□□□□□ -1.87
NR2E3Q9Y5X4 PTGES3P4-201ENST00000426243 356 ntBASIC3.36□□□□□ -1.87
NR2E3Q9Y5X4 AC092813.2-201ENST00000434540 399 ntTSL 3 BASIC3.36□□□□□ -1.87
NR2E3Q9Y5X4 SIRPG-AS1-201ENST00000437384 410 ntTSL 3 BASIC3.36□□□□□ -1.87
NR2E3Q9Y5X4 AC091153.2-202ENST00000441700 384 ntTSL 3 BASIC3.36□□□□□ -1.87
NR2E3Q9Y5X4 GSTA11P-201ENST00000452866 669 ntBASIC3.36□□□□□ -1.87
NR2E3Q9Y5X4 SNORD109B-201ENST00000458961 67 ntBASIC3.36□□□□□ -1.87
NR2E3Q9Y5X4 SNORD109A-201ENST00000459128 67 ntBASIC3.36□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 166 ms