Protein–RNA interactions for Protein: Q9Y5I3

PCDHA1, Protocadherin alpha-1, humanhuman

Predictions only

Length 950 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA1Q9Y5I3 AC245427.9-201ENST00000633713 53 ntAPPRIS P1 BASIC3.25□□□□□ -1.89
PCDHA1Q9Y5I3 AC093831.2-201ENST00000624393 3427 ntBASIC3.25□□□□□ -1.89
PCDHA1Q9Y5I3 AP003122.5-201ENST00000527668 3766 ntBASIC3.25□□□□□ -1.89
PCDHA1Q9Y5I3 HTR2B-201ENST00000258400 2246 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
PCDHA1Q9Y5I3 ANKRD36BP1-201ENST00000358576 1779 ntBASIC3.25□□□□□ -1.89
PCDHA1Q9Y5I3 DEUP1-202ENST00000525646 1920 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
PCDHA1Q9Y5I3 AC100800.1-201ENST00000524252 2054 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
PCDHA1Q9Y5I3 ZNF404-202ENST00000587539 1851 ntAPPRIS P2 TSL 5 BASIC3.24□□□□□ -1.89
PCDHA1Q9Y5I3 BCLAF1-205ENST00000527536 5371 ntTSL 5 BASIC3.24□□□□□ -1.89
PCDHA1Q9Y5I3 Y_RNA.252-201ENST00000364556 101 ntBASIC3.24□□□□□ -1.89
PCDHA1Q9Y5I3 RNU6-622P-201ENST00000384272 103 ntBASIC3.24□□□□□ -1.89
PCDHA1Q9Y5I3 AC010731.2-201ENST00000415275 440 ntTSL 3 BASIC3.24□□□□□ -1.89
PCDHA1Q9Y5I3 AL031659.1-201ENST00000447075 539 ntBASIC3.24□□□□□ -1.89
PCDHA1Q9Y5I3 AL136164.1-201ENST00000456795 352 ntTSL 3 BASIC3.24□□□□□ -1.89
PCDHA1Q9Y5I3 FO393415.2-201ENST00000480085 343 ntBASIC3.24□□□□□ -1.89
PCDHA1Q9Y5I3 AC022493.2-201ENST00000506122 481 ntBASIC3.24□□□□□ -1.89
PCDHA1Q9Y5I3 MTND4LP22-201ENST00000508209 276 ntBASIC3.24□□□□□ -1.89
PCDHA1Q9Y5I3 LINC02269-201ENST00000509968 511 ntTSL 3 BASIC3.24□□□□□ -1.89
PCDHA1Q9Y5I3 RNA5SP356-201ENST00000515972 94 ntBASIC3.24□□□□□ -1.89
PCDHA1Q9Y5I3 CBX3P8-201ENST00000532412 525 ntBASIC3.24□□□□□ -1.89
PCDHA1Q9Y5I3 AC079600.2-201ENST00000550076 130 ntBASIC3.24□□□□□ -1.89
PCDHA1Q9Y5I3 AC026462.2-201ENST00000565771 286 ntTSL 2 BASIC3.24□□□□□ -1.89
PCDHA1Q9Y5I3 AC024610.1-201ENST00000582685 323 ntTSL 3 BASIC3.24□□□□□ -1.89
PCDHA1Q9Y5I3 AC012254.1-201ENST00000592747 200 ntTSL 3 BASIC3.24□□□□□ -1.89
PCDHA1Q9Y5I3 AC022432.1-201ENST00000595739 310 ntBASIC3.24□□□□□ -1.89
PCDHA1Q9Y5I3 BX546450.2-201ENST00000602419 435 ntTSL 5 BASIC3.24□□□□□ -1.89
PCDHA1Q9Y5I3 AC009318.2-201ENST00000610917 651 ntBASIC3.24□□□□□ -1.89
PCDHA1Q9Y5I3 LINC01002-202ENST00000631412 459 ntTSL 5 BASIC3.24□□□□□ -1.89
PCDHA1Q9Y5I3 MTND5P9-201ENST00000503854 1755 ntBASIC3.24□□□□□ -1.89
PCDHA1Q9Y5I3 SNHG14-215ENST00000551631 4008 ntTSL 5 BASIC3.24□□□□□ -1.89
PCDHA1Q9Y5I3 ZNF567-201ENST00000360729 2691 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
PCDHA1Q9Y5I3 RNU6-799P-201ENST00000363567 107 ntBASIC3.23□□□□□ -1.89
PCDHA1Q9Y5I3 SNORD32A-201ENST00000364805 84 ntBASIC3.23□□□□□ -1.89
PCDHA1Q9Y5I3 PMCHL1-202ENST00000423102 261 ntBASIC3.23□□□□□ -1.89
PCDHA1Q9Y5I3 RPL23AP95-201ENST00000426806 265 ntBASIC3.23□□□□□ -1.89
PCDHA1Q9Y5I3 TRIAP1P1-201ENST00000427062 225 ntBASIC3.23□□□□□ -1.89
PCDHA1Q9Y5I3 RAB6C-AS1-202ENST00000433431 123 ntBASIC3.23□□□□□ -1.89
PCDHA1Q9Y5I3 RPL23AP50-201ENST00000434149 455 ntBASIC3.23□□□□□ -1.89
PCDHA1Q9Y5I3 AC012308.1-201ENST00000451232 178 ntBASIC3.23□□□□□ -1.89
PCDHA1Q9Y5I3 AC079354.2-201ENST00000453523 154 ntBASIC3.23□□□□□ -1.89
PCDHA1Q9Y5I3 AL441985.1-201ENST00000457727 251 ntBASIC3.23□□□□□ -1.89
PCDHA1Q9Y5I3 AL163540.1-201ENST00000485382 386 ntBASIC3.23□□□□□ -1.89
PCDHA1Q9Y5I3 AC111000.4-202ENST00000505646 2648 ntTSL 2 BASIC3.23□□□□□ -1.89
PCDHA1Q9Y5I3 SCARNA15.1-201ENST00000516384 125 ntBASIC3.23□□□□□ -1.89
PCDHA1Q9Y5I3 CBX3P7-201ENST00000532876 502 ntBASIC3.23□□□□□ -1.89
PCDHA1Q9Y5I3 AC091564.4-201ENST00000533934 2194 ntBASIC3.23□□□□□ -1.89
PCDHA1Q9Y5I3 AC006023.1-201ENST00000603944 259 ntBASIC3.23□□□□□ -1.89
PCDHA1Q9Y5I3 AC005014.2-201ENST00000607795 599 ntBASIC3.23□□□□□ -1.89
PCDHA1Q9Y5I3 AC091925.1-201ENST00000623204 462 ntBASIC3.23□□□□□ -1.89
PCDHA1Q9Y5I3 ZNF299P-201ENST00000406845 1804 ntBASIC3.23□□□□□ -1.89
PCDHA1Q9Y5I3 AC092593.1-201ENST00000515413 1815 ntBASIC3.23□□□□□ -1.89
PCDHA1Q9Y5I3 CEP85L-202ENST00000368488 7118 ntTSL 5 BASIC3.22□□□□□ -1.89
PCDHA1Q9Y5I3 PIK3C2G-206ENST00000538779 4963 ntTSL 5 BASIC3.22□□□□□ -1.89
PCDHA1Q9Y5I3 MYOT-208ENST00000515645 1578 ntTSL 2 BASIC3.22□□□□□ -1.89
PCDHA1Q9Y5I3 RBBP8P1-201ENST00000449447 1844 ntBASIC3.22□□□□□ -1.89
PCDHA1Q9Y5I3 RNU6-595P-201ENST00000363944 107 ntBASIC3.22□□□□□ -1.89
PCDHA1Q9Y5I3 Y_RNA.202-201ENST00000364083 110 ntBASIC3.22□□□□□ -1.89
PCDHA1Q9Y5I3 NUP35P1-201ENST00000422734 947 ntBASIC3.22□□□□□ -1.89
PCDHA1Q9Y5I3 AL035666.1-201ENST00000446195 348 ntBASIC3.22□□□□□ -1.89
PCDHA1Q9Y5I3 AL591504.1-201ENST00000450681 414 ntTSL 3 BASIC3.22□□□□□ -1.89
PCDHA1Q9Y5I3 SPAG11B-206ENST00000458665 444 ntTSL 5 BASIC3.22□□□□□ -1.89
PCDHA1Q9Y5I3 AC107626.1-201ENST00000471084 183 ntBASIC3.22□□□□□ -1.89
PCDHA1Q9Y5I3 RPL17P19-201ENST00000489069 552 ntBASIC3.22□□□□□ -1.89
PCDHA1Q9Y5I3 AC092185.1-201ENST00000491371 97 ntBASIC3.22□□□□□ -1.89
PCDHA1Q9Y5I3 AC021491.3-201ENST00000513378 156 ntTSL 3 BASIC3.22□□□□□ -1.89
PCDHA1Q9Y5I3 DNAJC8P1-201ENST00000554535 372 ntBASIC3.22□□□□□ -1.89
PCDHA1Q9Y5I3 AC090897.2-201ENST00000581715 130 ntBASIC3.22□□□□□ -1.89
PCDHA1Q9Y5I3 LUZP6-201ENST00000589735 177 ntAPPRIS P1 BASIC3.22□□□□□ -1.89
PCDHA1Q9Y5I3 AC020910.1-201ENST00000599404 413 ntTSL 5 BASIC3.22□□□□□ -1.89
PCDHA1Q9Y5I3 AL158827.2-201ENST00000602494 330 ntBASIC3.22□□□□□ -1.89
PCDHA1Q9Y5I3 AC090115.4-201ENST00000609970 188 ntBASIC3.22□□□□□ -1.89
PCDHA1Q9Y5I3 AL359962.2-201ENST00000610044 303 ntTSL 5 BASIC3.22□□□□□ -1.89
PCDHA1Q9Y5I3 AL691447.3-201ENST00000635020 330 ntBASIC3.22□□□□□ -1.89
PCDHA1Q9Y5I3 MME-216ENST00000615825 5523 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
PCDHA1Q9Y5I3 ZNF626-204ENST00000612591 4404 ntAPPRIS P1 TSL 5 BASIC3.22□□□□□ -1.89
PCDHA1Q9Y5I3 AL365440.2-201ENST00000419738 2597 ntTSL 2 BASIC3.21□□□□□ -1.9
PCDHA1Q9Y5I3 MCF2-208ENST00000519895 3346 ntAPPRIS ALT2 TSL 2 BASIC3.21□□□□□ -1.9
PCDHA1Q9Y5I3 FGF7-202ENST00000560270 1688 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
PCDHA1Q9Y5I3 AC110774.1-201ENST00000623567 2018 ntBASIC3.21□□□□□ -1.9
PCDHA1Q9Y5I3 Y_RNA.28-201ENST00000362554 111 ntBASIC3.21□□□□□ -1.9
PCDHA1Q9Y5I3 Y_RNA.31-201ENST00000362574 102 ntBASIC3.21□□□□□ -1.9
PCDHA1Q9Y5I3 Y_RNA.123-201ENST00000363338 102 ntBASIC3.21□□□□□ -1.9
PCDHA1Q9Y5I3 Y_RNA.132-201ENST00000363421 102 ntBASIC3.21□□□□□ -1.9
PCDHA1Q9Y5I3 Y_RNA.533-201ENST00000384596 114 ntBASIC3.21□□□□□ -1.9
PCDHA1Q9Y5I3 RNU6-1222P-201ENST00000384615 107 ntBASIC3.21□□□□□ -1.9
PCDHA1Q9Y5I3 AL138827.1-201ENST00000402666 306 ntBASIC3.21□□□□□ -1.9
PCDHA1Q9Y5I3 AL139281.1-201ENST00000422120 335 ntBASIC3.21□□□□□ -1.9
PCDHA1Q9Y5I3 AL445259.1-203ENST00000427828 251 ntTSL 3 BASIC3.21□□□□□ -1.9
PCDHA1Q9Y5I3 AC004383.1-201ENST00000438135 289 ntBASIC3.21□□□□□ -1.9
PCDHA1Q9Y5I3 AL353148.1-201ENST00000449761 463 ntTSL 2 BASIC3.21□□□□□ -1.9
PCDHA1Q9Y5I3 RPS27P26-201ENST00000494583 239 ntBASIC3.21□□□□□ -1.9
PCDHA1Q9Y5I3 LINC02103-201ENST00000512849 523 ntTSL 5 BASIC3.21□□□□□ -1.9
PCDHA1Q9Y5I3 RNU6-699P-201ENST00000517081 110 ntBASIC3.21□□□□□ -1.9
PCDHA1Q9Y5I3 AC007619.1-201ENST00000544086 412 ntTSL 5 BASIC3.21□□□□□ -1.9
PCDHA1Q9Y5I3 POC1B-211ENST00000549504 581 ntTSL 5 BASIC3.21□□□□□ -1.9
PCDHA1Q9Y5I3 MIR5701-3-201ENST00000578890 82 ntBASIC3.21□□□□□ -1.9
PCDHA1Q9Y5I3 MIR5701-1-201ENST00000585138 82 ntBASIC3.21□□□□□ -1.9
PCDHA1Q9Y5I3 AC135178.3-204ENST00000585181 451 ntTSL 2 BASIC3.21□□□□□ -1.9
PCDHA1Q9Y5I3 MIR5701-2-201ENST00000615634 82 ntBASIC3.21□□□□□ -1.9
PCDHA1Q9Y5I3 HMGB1P24-202ENST00000615653 685 ntBASIC3.21□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 137.9 ms