Protein–RNA interactions for Protein: Q9Y2X8

UBE2D4, Ubiquitin-conjugating enzyme E2 D4, humanhuman

Predictions only

Length 147 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D4Q9Y2X8 SNORA42.1-201ENST00000363515 137 ntBASIC-0.22□□□□□ -2.44
UBE2D4Q9Y2X8 SNORA16.2-201ENST00000390991 127 ntBASIC-0.22□□□□□ -2.44
UBE2D4Q9Y2X8 CBX3P9-201ENST00000402326 552 ntBASIC-0.22□□□□□ -2.44
UBE2D4Q9Y2X8 AL355796.1-201ENST00000406706 323 ntBASIC-0.22□□□□□ -2.44
UBE2D4Q9Y2X8 RNA5SP222-201ENST00000411039 105 ntBASIC-0.22□□□□□ -2.44
UBE2D4Q9Y2X8 BX664727.1-201ENST00000416024 466 ntBASIC-0.22□□□□□ -2.44
UBE2D4Q9Y2X8 AL606489.2-201ENST00000433886 234 ntBASIC-0.22□□□□□ -2.44
UBE2D4Q9Y2X8 AL357793.2-201ENST00000447056 850 ntTSL 3 BASIC-0.22□□□□□ -2.44
UBE2D4Q9Y2X8 HMGB1P29-201ENST00000505659 499 ntBASIC-0.22□□□□□ -2.44
UBE2D4Q9Y2X8 AC005741.1-201ENST00000511094 432 ntBASIC-0.22□□□□□ -2.44
UBE2D4Q9Y2X8 GYPA-209ENST00000512789 258 ntTSL 1 (best) BASIC-0.22□□□□□ -2.44
UBE2D4Q9Y2X8 AP003049.1-201ENST00000529418 457 ntBASIC-0.22□□□□□ -2.44
UBE2D4Q9Y2X8 BNIP3P6-201ENST00000549284 499 ntBASIC-0.22□□□□□ -2.44
UBE2D4Q9Y2X8 AC242628.1-201ENST00000606810 391 ntBASIC-0.22□□□□□ -2.44
UBE2D4Q9Y2X8 AC090517.2-201ENST00000614966 680 ntBASIC-0.22□□□□□ -2.44
UBE2D4Q9Y2X8 MIR4315-1-201ENST00000636800 73 ntBASIC-0.22□□□□□ -2.44
UBE2D4Q9Y2X8 MIR4315-2-201ENST00000640925 73 ntBASIC-0.22□□□□□ -2.44
UBE2D4Q9Y2X8 CEP57L1-223ENST00000523787 2522 ntAPPRIS ALT2 TSL 5 BASIC-0.22□□□□□ -2.44
UBE2D4Q9Y2X8 CASC19-280ENST00000642102 1351 ntBASIC-0.22□□□□□ -2.45
UBE2D4Q9Y2X8 AL079343.1-201ENST00000572358 1771 ntBASIC-0.22□□□□□ -2.45
UBE2D4Q9Y2X8 Y_RNA.185-201ENST00000363894 100 ntBASIC-0.23□□□□□ -2.45
UBE2D4Q9Y2X8 RNU4-48P-201ENST00000365559 182 ntBASIC-0.23□□□□□ -2.45
UBE2D4Q9Y2X8 RAP1BP3-201ENST00000407180 549 ntBASIC-0.23□□□□□ -2.45
UBE2D4Q9Y2X8 UBE2V1P10-201ENST00000414685 269 ntBASIC-0.23□□□□□ -2.45
UBE2D4Q9Y2X8 AC244098.3-201ENST00000424803 96 ntBASIC-0.23□□□□□ -2.45
UBE2D4Q9Y2X8 AC113331.1-201ENST00000428160 869 ntTSL 2 BASIC-0.23□□□□□ -2.45
UBE2D4Q9Y2X8 LINC02264-201ENST00000442020 576 ntTSL 3 BASIC-0.23□□□□□ -2.45
UBE2D4Q9Y2X8 SNRPGP12-201ENST00000449481 213 ntBASIC-0.23□□□□□ -2.45
UBE2D4Q9Y2X8 FABP5P15-201ENST00000453566 214 ntBASIC-0.23□□□□□ -2.45
UBE2D4Q9Y2X8 LINC02301-203ENST00000555798 789 ntTSL 3 BASIC-0.23□□□□□ -2.45
UBE2D4Q9Y2X8 AL161798.1-201ENST00000604630 131 ntBASIC-0.23□□□□□ -2.45
UBE2D4Q9Y2X8 Hammerhead_HH9.1-201ENST00000616606 77 ntBASIC-0.23□□□□□ -2.45
UBE2D4Q9Y2X8 AC067863.3-201ENST00000624172 122 ntBASIC-0.23□□□□□ -2.45
UBE2D4Q9Y2X8 AC012361.1-201ENST00000447260 1498 ntTSL 1 (best) BASIC-0.23□□□□□ -2.45
UBE2D4Q9Y2X8 AL159152.1-201ENST00000635019 2587 ntBASIC-0.24□□□□□ -2.45
UBE2D4Q9Y2X8 SNORD114-31-201ENST00000363219 75 ntBASIC-0.24□□□□□ -2.45
UBE2D4Q9Y2X8 RNU6-923P-201ENST00000364753 107 ntBASIC-0.24□□□□□ -2.45
UBE2D4Q9Y2X8 RNU6-637P-201ENST00000384050 107 ntBASIC-0.24□□□□□ -2.45
UBE2D4Q9Y2X8 MIR214-201ENST00000385214 110 ntBASIC-0.24□□□□□ -2.45
UBE2D4Q9Y2X8 AL357139.1-201ENST00000407792 426 ntBASIC-0.24□□□□□ -2.45
UBE2D4Q9Y2X8 RAC1P8-201ENST00000427086 527 ntBASIC-0.24□□□□□ -2.45
UBE2D4Q9Y2X8 AL139397.1-201ENST00000430456 644 ntTSL 2 BASIC-0.24□□□□□ -2.45
UBE2D4Q9Y2X8 RNU7-90P-201ENST00000459216 62 ntBASIC-0.24□□□□□ -2.45
UBE2D4Q9Y2X8 U7.7-201ENST00000459276 60 ntBASIC-0.24□□□□□ -2.45
UBE2D4Q9Y2X8 RNU7-21P-201ENST00000459430 62 ntBASIC-0.24□□□□□ -2.45
UBE2D4Q9Y2X8 MTND5P13-201ENST00000513046 1079 ntBASIC-0.24□□□□□ -2.45
UBE2D4Q9Y2X8 MIR4709-201ENST00000577272 72 ntBASIC-0.24□□□□□ -2.45
UBE2D4Q9Y2X8 BNIP3P24-201ENST00000593398 557 ntBASIC-0.24□□□□□ -2.45
UBE2D4Q9Y2X8 VN1R83P-201ENST00000595685 445 ntBASIC-0.24□□□□□ -2.45
UBE2D4Q9Y2X8 AC098483.2-201ENST00000603158 454 ntBASIC-0.24□□□□□ -2.45
UBE2D4Q9Y2X8 MIR3976-201ENST00000606807 139 ntBASIC-0.24□□□□□ -2.45
UBE2D4Q9Y2X8 AC024060.1-201ENST00000607052 494 ntBASIC-0.24□□□□□ -2.45
UBE2D4Q9Y2X8 PDCD6IPP1-201ENST00000615124 579 ntTSL 2 BASIC-0.24□□□□□ -2.45
UBE2D4Q9Y2X8 C1orf141-205ENST00000475209 2079 ntAPPRIS ALT2 TSL 5 BASIC-0.25□□□□□ -2.45
UBE2D4Q9Y2X8 RNU6-1210P-201ENST00000363775 107 ntBASIC-0.25□□□□□ -2.45
UBE2D4Q9Y2X8 Y_RNA.332-201ENST00000365271 113 ntBASIC-0.25□□□□□ -2.45
UBE2D4Q9Y2X8 SNORA4.3-201ENST00000365564 137 ntBASIC-0.25□□□□□ -2.45
UBE2D4Q9Y2X8 RNU6-898P-201ENST00000365627 104 ntBASIC-0.25□□□□□ -2.45
UBE2D4Q9Y2X8 Y_RNA.597-201ENST00000410463 100 ntBASIC-0.25□□□□□ -2.45
UBE2D4Q9Y2X8 AC003991.1-202ENST00000447058 777 ntTSL 3 BASIC-0.25□□□□□ -2.45
UBE2D4Q9Y2X8 MTCYBP11-201ENST00000447254 1109 ntBASIC-0.25□□□□□ -2.45
UBE2D4Q9Y2X8 AL050341.1-201ENST00000447743 313 ntBASIC-0.25□□□□□ -2.45
UBE2D4Q9Y2X8 NFU1P2-201ENST00000448700 469 ntBASIC-0.25□□□□□ -2.45
UBE2D4Q9Y2X8 AC024589.1-201ENST00000512207 263 ntBASIC-0.25□□□□□ -2.45
UBE2D4Q9Y2X8 AC118942.1-202ENST00000529081 578 ntTSL 5 BASIC-0.25□□□□□ -2.45
UBE2D4Q9Y2X8 MIR4782-201ENST00000577987 79 ntBASIC-0.25□□□□□ -2.45
UBE2D4Q9Y2X8 AC011195.1-201ENST00000578177 177 ntBASIC-0.25□□□□□ -2.45
UBE2D4Q9Y2X8 hsa-mir-3130-1.1-201ENST00000579223 75 ntBASIC-0.25□□□□□ -2.45
UBE2D4Q9Y2X8 LINC01893-201ENST00000581750 479 ntTSL 3 BASIC-0.25□□□□□ -2.45
UBE2D4Q9Y2X8 AL355816.2-201ENST00000610049 647 ntBASIC-0.25□□□□□ -2.45
UBE2D4Q9Y2X8 AL596245.1-201ENST00000618994 362 ntBASIC-0.25□□□□□ -2.45
UBE2D4Q9Y2X8 AC023490.1-202ENST00000620909 820 ntTSL 5 BASIC-0.25□□□□□ -2.45
UBE2D4Q9Y2X8 AC107982.1-201ENST00000507171 1300 ntBASIC-0.26□□□□□ -2.45
UBE2D4Q9Y2X8 SNRPEP3-201ENST00000338402 276 ntBASIC-0.26□□□□□ -2.45
UBE2D4Q9Y2X8 RNA5SP214-201ENST00000363378 118 ntBASIC-0.26□□□□□ -2.45
UBE2D4Q9Y2X8 IL6ST-202ENST00000381286 201 ntTSL 1 (best) BASIC-0.26□□□□□ -2.45
UBE2D4Q9Y2X8 RNU6-877P-201ENST00000383868 107 ntBASIC-0.26□□□□□ -2.45
UBE2D4Q9Y2X8 ELOCP9-201ENST00000418624 239 ntBASIC-0.26□□□□□ -2.45
UBE2D4Q9Y2X8 ISCA1P1-201ENST00000426679 387 ntBASIC-0.26□□□□□ -2.45
UBE2D4Q9Y2X8 LINC00189-202ENST00000431661 308 ntTSL 5 BASIC-0.26□□□□□ -2.45
UBE2D4Q9Y2X8 MTCO3P29-201ENST00000432119 779 ntBASIC-0.26□□□□□ -2.45
UBE2D4Q9Y2X8 AC008080.3-201ENST00000440074 380 ntTSL 3 BASIC-0.26□□□□□ -2.45
UBE2D4Q9Y2X8 AL358075.2-201ENST00000452785 339 ntTSL 2 BASIC-0.26□□□□□ -2.45
UBE2D4Q9Y2X8 LRRC70-203ENST00000491184 703 ntTSL 3 BASIC-0.26□□□□□ -2.45
UBE2D4Q9Y2X8 AC103957.1-202ENST00000519814 735 ntTSL 3 BASIC-0.26□□□□□ -2.45
UBE2D4Q9Y2X8 AC022022.2-201ENST00000602989 360 ntBASIC-0.26□□□□□ -2.45
UBE2D4Q9Y2X8 DPY19L1-208ENST00000612226 607 ntTSL 1 (best) BASIC-0.26□□□□□ -2.45
UBE2D4Q9Y2X8 KIF20B-201ENST00000260753 6306 ntAPPRIS P3 TSL 1 (best) BASIC-0.27□□□□□ -2.45
UBE2D4Q9Y2X8 VPS13A-206ENST00000376646 2262 ntTSL 5 BASIC-0.27□□□□□ -2.45
UBE2D4Q9Y2X8 AC092268.1-201ENST00000342691 405 ntBASIC-0.27□□□□□ -2.45
UBE2D4Q9Y2X8 MIR140-201ENST00000385282 100 ntBASIC-0.27□□□□□ -2.45
UBE2D4Q9Y2X8 RNU6-1300P-201ENST00000391046 108 ntBASIC-0.27□□□□□ -2.45
UBE2D4Q9Y2X8 RNU6-952P-201ENST00000391164 108 ntBASIC-0.27□□□□□ -2.45
UBE2D4Q9Y2X8 SPINK13-201ENST00000398450 509 ntAPPRIS P2 TSL 1 (best) BASIC-0.27□□□□□ -2.45
UBE2D4Q9Y2X8 MTATP6P27-201ENST00000416987 621 ntBASIC-0.27□□□□□ -2.45
UBE2D4Q9Y2X8 AC016710.1-201ENST00000421326 466 ntTSL 3 BASIC-0.27□□□□□ -2.45
UBE2D4Q9Y2X8 LINC00434-201ENST00000423739 419 ntTSL 3 BASIC-0.27□□□□□ -2.45
UBE2D4Q9Y2X8 MTCO1P3-201ENST00000429327 192 ntBASIC-0.27□□□□□ -2.45
UBE2D4Q9Y2X8 AC069257.2-201ENST00000441819 155 ntBASIC-0.27□□□□□ -2.45
UBE2D4Q9Y2X8 NDUFB4P10-201ENST00000452541 359 ntBASIC-0.27□□□□□ -2.45
Retrieved 100 of 98,524 protein–RNA pairs in 116 ms