Protein–RNA interactions for Protein: Q9UIU6

SIX4, Homeobox protein SIX4, humanhuman

Predictions only

Length 781 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX4Q9UIU6 ADAM3A-203ENST00000461344 2157 ntBASIC2.67□□□□□ -1.98
SIX4Q9UIU6 ANP32E-209ENST00000616917 2989 ntTSL 2 BASIC2.67□□□□□ -1.98
SIX4Q9UIU6 TECRL-202ENST00000507440 2876 ntTSL 5 BASIC2.67□□□□□ -1.98
SIX4Q9UIU6 OR5K1-202ENST00000642057 3466 ntAPPRIS P1 BASIC2.66□□□□□ -1.98
SIX4Q9UIU6 SYTL2-230ENST00000634661 6672 ntTSL 5 BASIC2.66□□□□□ -1.98
SIX4Q9UIU6 RNU4-82P-201ENST00000362443 140 ntBASIC2.66□□□□□ -1.98
SIX4Q9UIU6 RNU6-1317P-201ENST00000364582 104 ntBASIC2.66□□□□□ -1.98
SIX4Q9UIU6 RNU6-336P-201ENST00000364891 107 ntBASIC2.66□□□□□ -1.98
SIX4Q9UIU6 Y_RNA.404-201ENST00000383978 102 ntBASIC2.66□□□□□ -1.98
SIX4Q9UIU6 RNU6-310P-201ENST00000384655 107 ntBASIC2.66□□□□□ -1.98
SIX4Q9UIU6 RNU6-1011P-201ENST00000384668 107 ntBASIC2.66□□□□□ -1.98
SIX4Q9UIU6 TRAJ26-201ENST00000390511 60 ntAPPRIS P1 BASIC2.66□□□□□ -1.98
SIX4Q9UIU6 RNU6-1050P-201ENST00000410388 107 ntBASIC2.66□□□□□ -1.98
SIX4Q9UIU6 AL133396.1-201ENST00000432048 687 ntBASIC2.66□□□□□ -1.98
SIX4Q9UIU6 RPS15AP5-201ENST00000436276 388 ntBASIC2.66□□□□□ -1.98
SIX4Q9UIU6 AL513328.1-201ENST00000446460 224 ntBASIC2.66□□□□□ -1.98
SIX4Q9UIU6 FTH1P25-201ENST00000447665 469 ntBASIC2.66□□□□□ -1.98
SIX4Q9UIU6 PCMTD1P1-201ENST00000455560 355 ntBASIC2.66□□□□□ -1.98
SIX4Q9UIU6 RPL30P15-201ENST00000457129 321 ntBASIC2.66□□□□□ -1.98
SIX4Q9UIU6 SNORD5.1-201ENST00000458800 75 ntBASIC2.66□□□□□ -1.98
SIX4Q9UIU6 RNU7-152P-201ENST00000458982 64 ntBASIC2.66□□□□□ -1.98
SIX4Q9UIU6 Y_RNA.653-201ENST00000459091 95 ntBASIC2.66□□□□□ -1.98
SIX4Q9UIU6 RNU6-377P-201ENST00000515965 102 ntBASIC2.66□□□□□ -1.98
SIX4Q9UIU6 AC109479.2-201ENST00000517842 174 ntBASIC2.66□□□□□ -1.98
SIX4Q9UIU6 AC025871.1-202ENST00000518819 432 ntTSL 3 BASIC2.66□□□□□ -1.98
SIX4Q9UIU6 AC006199.1-201ENST00000548728 219 ntBASIC2.66□□□□□ -1.98
SIX4Q9UIU6 LINC01570-201ENST00000561572 434 ntTSL 3 BASIC2.66□□□□□ -1.98
SIX4Q9UIU6 AC141273.1-201ENST00000565300 479 ntTSL 5 BASIC2.66□□□□□ -1.98
SIX4Q9UIU6 AC093249.1-201ENST00000567049 203 ntBASIC2.66□□□□□ -1.98
SIX4Q9UIU6 MTCO3P13-201ENST00000577757 781 ntBASIC2.66□□□□□ -1.98
SIX4Q9UIU6 MIR3976-201ENST00000606807 139 ntBASIC2.66□□□□□ -1.98
SIX4Q9UIU6 AC019193.3-201ENST00000609144 554 ntBASIC2.66□□□□□ -1.98
SIX4Q9UIU6 AL133215.3-201ENST00000609801 448 ntBASIC2.66□□□□□ -1.98
SIX4Q9UIU6 AC023490.3-201ENST00000621762 358 ntTSL 3 BASIC2.66□□□□□ -1.98
SIX4Q9UIU6 AC097372.5-201ENST00000623665 376 ntBASIC2.66□□□□□ -1.98
SIX4Q9UIU6 AP000550.4-201ENST00000639507 358 ntTSL 3 BASIC2.66□□□□□ -1.98
SIX4Q9UIU6 AC069528.2-201ENST00000624849 1991 ntBASIC2.66□□□□□ -1.98
SIX4Q9UIU6 ARHGAP28-204ENST00000419673 5492 ntAPPRIS P2 TSL 1 (best) BASIC2.66□□□□□ -1.98
SIX4Q9UIU6 RAPGEF6-210ENST00000512052 3535 ntTSL 2 BASIC2.66□□□□□ -1.98
SIX4Q9UIU6 DNAH14-210ENST00000439375 13548 ntAPPRIS P1 TSL 5 BASIC2.66□□□□□ -1.98
SIX4Q9UIU6 DDX6-206ENST00000534980 4538 ntAPPRIS P1 TSL 1 (best) BASIC2.65□□□□□ -1.98
SIX4Q9UIU6 CUL3-203ENST00000409096 2701 ntTSL 1 (best) BASIC2.65□□□□□ -1.98
SIX4Q9UIU6 ST7-AS2-206ENST00000456577 1351 ntTSL 1 (best) BASIC2.65□□□□□ -1.98
SIX4Q9UIU6 SLC30A6-202ENST00000357055 4758 ntTSL 2 BASIC2.65□□□□□ -1.98
SIX4Q9UIU6 FAM46D-201ENST00000308293 3011 ntAPPRIS P1 TSL 1 (best) BASIC2.65□□□□□ -1.99
SIX4Q9UIU6 Y_RNA.315-201ENST00000365117 102 ntBASIC2.65□□□□□ -1.99
SIX4Q9UIU6 RNU6-842P-201ENST00000384269 107 ntBASIC2.65□□□□□ -1.99
SIX4Q9UIU6 RNU6-790P-201ENST00000384479 105 ntBASIC2.65□□□□□ -1.99
SIX4Q9UIU6 DEFB110-202ENST00000393660 189 ntAPPRIS ALT2 TSL 1 (best) BASIC2.65□□□□□ -1.99
SIX4Q9UIU6 FO393413.1-201ENST00000402892 195 ntBASIC2.65□□□□□ -1.99
SIX4Q9UIU6 FTH1P15-201ENST00000406984 280 ntBASIC2.65□□□□□ -1.99
SIX4Q9UIU6 RNU2-49P-201ENST00000410666 184 ntBASIC2.65□□□□□ -1.99
SIX4Q9UIU6 RNU2-25P-201ENST00000411041 191 ntBASIC2.65□□□□□ -1.99
SIX4Q9UIU6 AC092660.1-201ENST00000420648 371 ntTSL 2 BASIC2.65□□□□□ -1.99
SIX4Q9UIU6 AL669831.2-201ENST00000422528 456 ntTSL 5 BASIC2.65□□□□□ -1.99
SIX4Q9UIU6 MTCO2P12-201ENST00000427426 682 ntBASIC2.65□□□□□ -1.99
SIX4Q9UIU6 Z82205.1-201ENST00000428456 297 ntBASIC2.65□□□□□ -1.99
SIX4Q9UIU6 KCNMA1-AS2-201ENST00000428936 427 ntTSL 3 BASIC2.65□□□□□ -1.99
SIX4Q9UIU6 RPS15AP10-201ENST00000432472 382 ntBASIC2.65□□□□□ -1.99
SIX4Q9UIU6 UBBP3-201ENST00000445497 241 ntBASIC2.65□□□□□ -1.99
SIX4Q9UIU6 AC013727.2-201ENST00000447761 545 ntTSL 4 BASIC2.65□□□□□ -1.99
SIX4Q9UIU6 RNU7-23P-201ENST00000459465 62 ntBASIC2.65□□□□□ -1.99
SIX4Q9UIU6 RNU6-1037P-201ENST00000459571 107 ntBASIC2.65□□□□□ -1.99
SIX4Q9UIU6 AC091887.1-201ENST00000514002 439 ntTSL 5 BASIC2.65□□□□□ -1.99
SIX4Q9UIU6 Y_RNA.708-201ENST00000516950 96 ntBASIC2.65□□□□□ -1.99
SIX4Q9UIU6 NACAP3-201ENST00000552100 481 ntBASIC2.65□□□□□ -1.99
SIX4Q9UIU6 AL121821.2-201ENST00000556081 394 ntBASIC2.65□□□□□ -1.99
SIX4Q9UIU6 AC011494.1-201ENST00000596454 237 ntBASIC2.65□□□□□ -1.99
SIX4Q9UIU6 AC080078.3-201ENST00000605407 463 ntBASIC2.65□□□□□ -1.99
SIX4Q9UIU6 SCOC-AS1-203ENST00000609616 405 ntTSL 3 BASIC2.65□□□□□ -1.99
SIX4Q9UIU6 OR4C15-202ENST00000642128 951 ntAPPRIS P1 BASIC2.65□□□□□ -1.99
SIX4Q9UIU6 AC008669.1-201ENST00000565823 2178 ntBASIC2.65□□□□□ -1.99
SIX4Q9UIU6 LUZP4-201ENST00000371920 1701 ntAPPRIS P2 TSL 1 (best) BASIC2.65□□□□□ -1.99
SIX4Q9UIU6 RTL4-201ENST00000340433 2613 ntAPPRIS P1 BASIC2.64□□□□□ -1.99
SIX4Q9UIU6 RNU6-105P-201ENST00000363909 104 ntBASIC2.64□□□□□ -1.99
SIX4Q9UIU6 AL359511.1-201ENST00000402970 211 ntBASIC2.64□□□□□ -1.99
SIX4Q9UIU6 AL117337.1-201ENST00000412789 444 ntTSL 3 BASIC2.64□□□□□ -1.99
SIX4Q9UIU6 HNRNPDLP1-201ENST00000412834 550 ntBASIC2.64□□□□□ -1.99
SIX4Q9UIU6 AL139260.1-202ENST00000456813 441 ntTSL 3 BASIC2.64□□□□□ -1.99
SIX4Q9UIU6 AL354824.2-201ENST00000458004 446 ntTSL 3 BASIC2.64□□□□□ -1.99
SIX4Q9UIU6 RPL9P9-202ENST00000466501 579 ntBASIC2.64□□□□□ -1.99
SIX4Q9UIU6 AC027575.1-201ENST00000481064 460 ntBASIC2.64□□□□□ -1.99
SIX4Q9UIU6 MRPL42P6-201ENST00000486397 371 ntBASIC2.64□□□□□ -1.99
SIX4Q9UIU6 AC099520.1-202ENST00000503650 777 ntTSL 3 BASIC2.64□□□□□ -1.99
SIX4Q9UIU6 AC116655.1-201ENST00000508324 901 ntBASIC2.64□□□□□ -1.99
SIX4Q9UIU6 MTCYBP40-201ENST00000509390 1135 ntBASIC2.64□□□□□ -1.99
SIX4Q9UIU6 AC008892.1-201ENST00000511861 384 ntTSL 3 BASIC2.64□□□□□ -1.99
SIX4Q9UIU6 RPL23AP94-201ENST00000512518 302 ntBASIC2.64□□□□□ -1.99
SIX4Q9UIU6 AC105999.1-201ENST00000518722 473 ntTSL 3 BASIC2.64□□□□□ -1.99
SIX4Q9UIU6 ANP32BP3-201ENST00000559213 706 ntBASIC2.64□□□□□ -1.99
SIX4Q9UIU6 CPDP1-201ENST00000579660 283 ntBASIC2.64□□□□□ -1.99
SIX4Q9UIU6 MIR5690-201ENST00000583739 73 ntBASIC2.64□□□□□ -1.99
SIX4Q9UIU6 ZNF736P3Y-201ENST00000428264 1465 ntBASIC2.64□□□□□ -1.99
SIX4Q9UIU6 AC026241.1-201ENST00000517873 2142 ntBASIC2.63□□□□□ -1.99
SIX4Q9UIU6 MT-ND4-201ENST00000361381 1378 ntAPPRIS P1 BASIC2.63□□□□□ -1.99
SIX4Q9UIU6 CATSPERB-201ENST00000256343 3623 ntAPPRIS P2 TSL 1 (best) BASIC2.63□□□□□ -1.99
SIX4Q9UIU6 DLEU2_6.3-201ENST00000340052 136 ntBASIC2.63□□□□□ -1.99
SIX4Q9UIU6 ZBTB8OSP1-201ENST00000342688 498 ntBASIC2.63□□□□□ -1.99
SIX4Q9UIU6 MT-ND1-201ENST00000361390 956 ntAPPRIS P1 BASIC2.63□□□□□ -1.99
SIX4Q9UIU6 MIR369-201ENST00000362155 70 ntBASIC2.63□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 99.9 ms