Protein–RNA interactions for Protein: Q9UI33

SCN11A, Sodium channel protein type 11 subunit alpha, humanhuman

Predictions only

Length 1,791 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN11AQ9UI33 HMGN1P12-201ENST00000499125 195 ntBASIC-0.27□□□□□ -2.45
SCN11AQ9UI33 AC018630.3-201ENST00000542637 96 ntBASIC-0.27□□□□□ -2.45
SCN11AQ9UI33 AC126365.2-201ENST00000580630 379 ntBASIC-0.27□□□□□ -2.45
SCN11AQ9UI33 7SK.10-201ENST00000621414 298 ntBASIC-0.27□□□□□ -2.45
SCN11AQ9UI33 Clostridiales-1.4-201ENST00000636807 150 ntBASIC-0.27□□□□□ -2.45
SCN11AQ9UI33 U6.107-201ENST00000637108 79 ntBASIC-0.27□□□□□ -2.45
SCN11AQ9UI33 SNORA42.1-201ENST00000363515 137 ntBASIC-0.27□□□□□ -2.45
SCN11AQ9UI33 Y_RNA.245-201ENST00000364493 95 ntBASIC-0.27□□□□□ -2.45
SCN11AQ9UI33 SNORA36.2-201ENST00000384004 127 ntBASIC-0.27□□□□□ -2.45
SCN11AQ9UI33 Y_RNA.457-201ENST00000384237 111 ntBASIC-0.27□□□□□ -2.45
SCN11AQ9UI33 RNU6-233P-201ENST00000410845 141 ntBASIC-0.27□□□□□ -2.45
SCN11AQ9UI33 LINC01344-201ENST00000420760 261 ntTSL 3 BASIC-0.27□□□□□ -2.45
SCN11AQ9UI33 AC243964.1-201ENST00000441814 261 ntBASIC-0.27□□□□□ -2.45
SCN11AQ9UI33 AC130509.1-201ENST00000464158 433 ntBASIC-0.27□□□□□ -2.45
SCN11AQ9UI33 RPL39P38-201ENST00000467018 153 ntBASIC-0.27□□□□□ -2.45
SCN11AQ9UI33 HMGB1P29-201ENST00000505659 499 ntBASIC-0.27□□□□□ -2.45
SCN11AQ9UI33 Y_RNA.700-201ENST00000516806 100 ntBASIC-0.27□□□□□ -2.45
SCN11AQ9UI33 AC139497.1-201ENST00000524042 501 ntTSL 5 BASIC-0.27□□□□□ -2.45
SCN11AQ9UI33 AP003171.1-201ENST00000532770 266 ntTSL 2 BASIC-0.27□□□□□ -2.45
SCN11AQ9UI33 AL590240.4-201ENST00000616908 390 ntBASIC-0.27□□□□□ -2.45
SCN11AQ9UI33 AC009032.1-201ENST00000617574 431 ntBASIC-0.27□□□□□ -2.45
SCN11AQ9UI33 SNORA32.1-201ENST00000364514 115 ntBASIC-0.28□□□□□ -2.45
SCN11AQ9UI33 IL6ST-202ENST00000381286 201 ntTSL 1 (best) BASIC-0.28□□□□□ -2.45
SCN11AQ9UI33 ELOCP14-201ENST00000428070 331 ntBASIC-0.28□□□□□ -2.45
SCN11AQ9UI33 AL359081.1-201ENST00000432083 615 ntTSL 2 BASIC-0.28□□□□□ -2.45
SCN11AQ9UI33 ELOCP7-201ENST00000439968 331 ntBASIC-0.28□□□□□ -2.45
SCN11AQ9UI33 AC093534.1-201ENST00000504977 132 ntBASIC-0.28□□□□□ -2.45
SCN11AQ9UI33 AKIRIN2P1-201ENST00000505898 352 ntBASIC-0.28□□□□□ -2.45
SCN11AQ9UI33 KRTAP13-6P-201ENST00000508999 371 ntBASIC-0.28□□□□□ -2.45
SCN11AQ9UI33 RN7SKP256-201ENST00000517201 314 ntBASIC-0.28□□□□□ -2.45
SCN11AQ9UI33 HIGD1AP6-201ENST00000521833 279 ntBASIC-0.28□□□□□ -2.45
SCN11AQ9UI33 LINC02552-203ENST00000545630 583 ntTSL 2 BASIC-0.28□□□□□ -2.45
SCN11AQ9UI33 AL442163.3-201ENST00000554110 156 ntBASIC-0.28□□□□□ -2.45
SCN11AQ9UI33 AC022523.2-201ENST00000561045 150 ntBASIC-0.28□□□□□ -2.45
SCN11AQ9UI33 AL671309.1-201ENST00000603750 544 ntBASIC-0.28□□□□□ -2.45
SCN11AQ9UI33 AC011374.2-201ENST00000607135 526 ntBASIC-0.28□□□□□ -2.45
SCN11AQ9UI33 ZNF849P-201ENST00000594711 1566 ntBASIC-0.28□□□□□ -2.46
SCN11AQ9UI33 Y_RNA.48-201ENST00000362710 103 ntBASIC-0.29□□□□□ -2.46
SCN11AQ9UI33 Y_RNA.363-201ENST00000365529 113 ntBASIC-0.29□□□□□ -2.46
SCN11AQ9UI33 MIR153-2-201ENST00000385225 87 ntBASIC-0.29□□□□□ -2.46
SCN11AQ9UI33 AF228730.1-201ENST00000397972 663 ntBASIC-0.29□□□□□ -2.46
SCN11AQ9UI33 MIR938-201ENST00000401216 83 ntBASIC-0.29□□□□□ -2.46
SCN11AQ9UI33 AL663023.1-201ENST00000412932 853 ntTSL 3 BASIC-0.29□□□□□ -2.46
SCN11AQ9UI33 CCDC58P2-201ENST00000417131 366 ntBASIC-0.29□□□□□ -2.46
SCN11AQ9UI33 PPEF1-AS1-201ENST00000430641 430 ntTSL 5 BASIC-0.29□□□□□ -2.46
SCN11AQ9UI33 AC006369.2-201ENST00000431712 384 ntTSL 3 BASIC-0.29□□□□□ -2.46
SCN11AQ9UI33 AC092001.1-201ENST00000453012 261 ntBASIC-0.29□□□□□ -2.46
SCN11AQ9UI33 OFD1P4Y-201ENST00000455273 1179 ntBASIC-0.29□□□□□ -2.46
SCN11AQ9UI33 snoU13.27-201ENST00000459278 104 ntBASIC-0.29□□□□□ -2.46
SCN11AQ9UI33 AC010255.2-201ENST00000505209 428 ntTSL 3 BASIC-0.29□□□□□ -2.46
SCN11AQ9UI33 PKIA-AS1-203ENST00000522807 692 ntTSL 3 BASIC-0.29□□□□□ -2.46
SCN11AQ9UI33 AC034229.4-201ENST00000607861 441 ntBASIC-0.29□□□□□ -2.46
SCN11AQ9UI33 AC010615.1-201ENST00000594254 1764 ntBASIC-0.29□□□□□ -2.46
SCN11AQ9UI33 MIR520F-201ENST00000384824 87 ntBASIC-0.29□□□□□ -2.46
SCN11AQ9UI33 MIR635-201ENST00000384830 98 ntBASIC-0.29□□□□□ -2.46
SCN11AQ9UI33 RNU1-131P-201ENST00000458943 161 ntBASIC-0.29□□□□□ -2.46
SCN11AQ9UI33 AL356133.2-201ENST00000521572 371 ntTSL 3 BASIC-0.29□□□□□ -2.46
SCN11AQ9UI33 PCLAF-207ENST00000559519 749 ntTSL 2 BASIC-0.29□□□□□ -2.46
SCN11AQ9UI33 AL513534.2-201ENST00000603836 250 ntBASIC-0.29□□□□□ -2.46
SCN11AQ9UI33 uc_338.34-201ENST00000617467 174 ntBASIC-0.29□□□□□ -2.46
SCN11AQ9UI33 SNORD49B-201ENST00000365172 72 ntBASIC-0.3□□□□□ -2.46
SCN11AQ9UI33 AC005920.2-201ENST00000509833 332 ntTSL 3 BASIC-0.3□□□□□ -2.46
SCN11AQ9UI33 RNU6-491P-201ENST00000516099 110 ntBASIC-0.3□□□□□ -2.46
SCN11AQ9UI33 FAM92A-209ENST00000519679 538 ntTSL 4 BASIC-0.3□□□□□ -2.46
SCN11AQ9UI33 AC004217.3-201ENST00000551552 878 ntBASIC-0.3□□□□□ -2.46
SCN11AQ9UI33 ETDC-201ENST00000635820 180 ntAPPRIS P1 BASIC-0.3□□□□□ -2.46
SCN11AQ9UI33 AC119674.1-220ENST00000641502 1048 ntBASIC-0.3□□□□□ -2.46
SCN11AQ9UI33 RNU6-743P-201ENST00000364151 106 ntBASIC-0.31□□□□□ -2.46
SCN11AQ9UI33 MIR644A-201ENST00000385262 94 ntBASIC-0.31□□□□□ -2.46
SCN11AQ9UI33 RNA5SP504-201ENST00000410676 117 ntBASIC-0.31□□□□□ -2.46
SCN11AQ9UI33 AC073311.1-201ENST00000420146 505 ntTSL 5 BASIC-0.31□□□□□ -2.46
SCN11AQ9UI33 PPP1R11P2-201ENST00000423543 382 ntBASIC-0.31□□□□□ -2.46
SCN11AQ9UI33 AC008267.5-201ENST00000424928 265 ntBASIC-0.31□□□□□ -2.46
SCN11AQ9UI33 AC015724.1-201ENST00000478577 156 ntBASIC-0.31□□□□□ -2.46
SCN11AQ9UI33 AC092944.1-205ENST00000494885 517 ntTSL 4 BASIC-0.31□□□□□ -2.46
SCN11AQ9UI33 AC024589.1-201ENST00000512207 263 ntBASIC-0.31□□□□□ -2.46
SCN11AQ9UI33 RNU6-202P-201ENST00000515998 96 ntBASIC-0.31□□□□□ -2.46
SCN11AQ9UI33 AP001429.1-201ENST00000602568 530 ntBASIC-0.31□□□□□ -2.46
SCN11AQ9UI33 AC117490.2-201ENST00000610042 594 ntBASIC-0.31□□□□□ -2.46
SCN11AQ9UI33 AL353149.1-201ENST00000610667 244 ntBASIC-0.31□□□□□ -2.46
SCN11AQ9UI33 GHRLOS.1-201ENST00000610995 70 ntBASIC-0.31□□□□□ -2.46
SCN11AQ9UI33 AC018926.1-201ENST00000616335 435 ntBASIC-0.31□□□□□ -2.46
SCN11AQ9UI33 ZNF404-202ENST00000587539 1851 ntAPPRIS P2 TSL 5 BASIC-0.31□□□□□ -2.46
SCN11AQ9UI33 RNU1-39P-201ENST00000383897 165 ntBASIC-0.32□□□□□ -2.46
SCN11AQ9UI33 RNU6ATAC33P-201ENST00000408647 126 ntBASIC-0.32□□□□□ -2.46
SCN11AQ9UI33 AC138623.1-201ENST00000418060 216 ntBASIC-0.32□□□□□ -2.46
SCN11AQ9UI33 AC012308.1-201ENST00000451232 178 ntBASIC-0.32□□□□□ -2.46
SCN11AQ9UI33 AC097467.1-201ENST00000513660 370 ntTSL 5 BASIC-0.32□□□□□ -2.46
SCN11AQ9UI33 LINC01609-201ENST00000519506 424 ntTSL 3 BASIC-0.32□□□□□ -2.46
SCN11AQ9UI33 AC009269.6-201ENST00000621778 588 ntBASIC-0.32□□□□□ -2.46
SCN11AQ9UI33 SNORD3E-202ENST00000627253 216 ntBASIC-0.32□□□□□ -2.46
SCN11AQ9UI33 AL590396.4-201ENST00000636779 956 ntBASIC-0.32□□□□□ -2.46
SCN11AQ9UI33 LINC02555-201ENST00000563933 1951 ntBASIC-0.32□□□□□ -2.46
SCN11AQ9UI33 SNORA63D-201ENST00000364359 132 ntBASIC-0.32□□□□□ -2.46
SCN11AQ9UI33 RNU6-48P-201ENST00000384161 107 ntBASIC-0.32□□□□□ -2.46
SCN11AQ9UI33 AL355796.1-201ENST00000406706 323 ntBASIC-0.32□□□□□ -2.46
SCN11AQ9UI33 GRK5-IT1-201ENST00000421206 400 ntTSL 3 BASIC-0.32□□□□□ -2.46
SCN11AQ9UI33 MRPS18CP6-201ENST00000423587 223 ntBASIC-0.32□□□□□ -2.46
SCN11AQ9UI33 AC002486.1-201ENST00000435098 391 ntBASIC-0.32□□□□□ -2.46
SCN11AQ9UI33 MTND1P33-201ENST00000446251 917 ntBASIC-0.32□□□□□ -2.46
Retrieved 100 of 98,524 protein–RNA pairs in 96.2 ms