Protein–RNA interactions for Protein: Q9UDT6

CLIP2, CAP-Gly domain-containing linker protein 2, humanhuman

Predictions only

Length 1,046 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2Q9UDT6 RNA5SP125-201ENST00000364843 120 ntBASIC2.36□□□□□ -2.03
CLIP2Q9UDT6 RNU6-898P-201ENST00000365627 104 ntBASIC2.36□□□□□ -2.03
CLIP2Q9UDT6 SNORA69-201ENST00000383895 132 ntBASIC2.36□□□□□ -2.03
CLIP2Q9UDT6 RNU6-39P-201ENST00000384344 107 ntBASIC2.36□□□□□ -2.03
CLIP2Q9UDT6 RNU6-456P-201ENST00000384493 107 ntBASIC2.36□□□□□ -2.03
CLIP2Q9UDT6 snosnR66.1-201ENST00000391095 99 ntBASIC2.36□□□□□ -2.03
CLIP2Q9UDT6 ELOCP4-201ENST00000420090 333 ntBASIC2.36□□□□□ -2.03
CLIP2Q9UDT6 AC003685.2-201ENST00000422795 395 ntBASIC2.36□□□□□ -2.03
CLIP2Q9UDT6 AL139397.1-201ENST00000430456 644 ntTSL 2 BASIC2.36□□□□□ -2.03
CLIP2Q9UDT6 AL591806.2-201ENST00000433122 173 ntBASIC2.36□□□□□ -2.03
CLIP2Q9UDT6 AKIRIN2P1-201ENST00000505898 352 ntBASIC2.36□□□□□ -2.03
CLIP2Q9UDT6 MTND3P22-201ENST00000510932 243 ntBASIC2.36□□□□□ -2.03
CLIP2Q9UDT6 RNA5SP401-201ENST00000515920 127 ntBASIC2.36□□□□□ -2.03
CLIP2Q9UDT6 Vault.3-201ENST00000516676 95 ntBASIC2.36□□□□□ -2.03
CLIP2Q9UDT6 LINC01495-202ENST00000534135 343 ntTSL 2 BASIC2.36□□□□□ -2.03
CLIP2Q9UDT6 PWRN1-205ENST00000565295 465 ntTSL 3 BASIC2.36□□□□□ -2.03
CLIP2Q9UDT6 AC015813.2-201ENST00000578794 711 ntAPPRIS P1 TSL 3 BASIC2.36□□□□□ -2.03
CLIP2Q9UDT6 AC020910.1-201ENST00000599404 413 ntTSL 5 BASIC2.36□□□□□ -2.03
CLIP2Q9UDT6 AC012507.3-201ENST00000603556 477 ntBASIC2.36□□□□□ -2.03
CLIP2Q9UDT6 AC009314.1-201ENST00000603871 304 ntBASIC2.36□□□□□ -2.03
CLIP2Q9UDT6 AL161423.1-201ENST00000613700 262 ntBASIC2.36□□□□□ -2.03
CLIP2Q9UDT6 DLEU2_6.2-201ENST00000620994 136 ntBASIC2.36□□□□□ -2.03
CLIP2Q9UDT6 AC006504.8-201ENST00000621046 635 ntBASIC2.36□□□□□ -2.03
CLIP2Q9UDT6 AC024940.5-201ENST00000622889 474 ntBASIC2.36□□□□□ -2.03
CLIP2Q9UDT6 AC241585.2-209ENST00000638217 143 ntBASIC2.36□□□□□ -2.03
CLIP2Q9UDT6 ZNF680P1-201ENST00000436625 1469 ntBASIC2.36□□□□□ -2.03
CLIP2Q9UDT6 OR5M1-202ENST00000641076 4302 ntAPPRIS P1 BASIC2.36□□□□□ -2.03
CLIP2Q9UDT6 MIER3-204ENST00000381226 5210 ntAPPRIS ALT1 TSL 1 (best) BASIC2.36□□□□□ -2.03
CLIP2Q9UDT6 PTPRQ-209ENST00000616559 8165 ntTSL 5 BASIC2.36□□□□□ -2.03
CLIP2Q9UDT6 SNORD81.2-201ENST00000365153 76 ntBASIC2.35□□□□□ -2.03
CLIP2Q9UDT6 SNORA75B-201ENST00000384053 137 ntBASIC2.35□□□□□ -2.03
CLIP2Q9UDT6 RNU6-1011P-201ENST00000384668 107 ntBASIC2.35□□□□□ -2.03
CLIP2Q9UDT6 MIR764-201ENST00000390811 85 ntBASIC2.35□□□□□ -2.03
CLIP2Q9UDT6 SNORA46.1-201ENST00000391069 153 ntBASIC2.35□□□□□ -2.03
CLIP2Q9UDT6 MDM2-208ENST00000393410 732 ntTSL 1 (best) BASIC2.35□□□□□ -2.03
CLIP2Q9UDT6 MDM2-210ENST00000393413 657 ntTSL 1 (best) BASIC2.35□□□□□ -2.03
CLIP2Q9UDT6 AL356432.1-201ENST00000405809 419 ntBASIC2.35□□□□□ -2.03
CLIP2Q9UDT6 LINC00428-201ENST00000415620 227 ntTSL 5 BASIC2.35□□□□□ -2.03
CLIP2Q9UDT6 MTATP6P18-201ENST00000417994 673 ntBASIC2.35□□□□□ -2.03
CLIP2Q9UDT6 AL353621.1-201ENST00000418219 243 ntBASIC2.35□□□□□ -2.03
CLIP2Q9UDT6 TIMM9P3-201ENST00000428659 274 ntBASIC2.35□□□□□ -2.03
CLIP2Q9UDT6 AL353148.1-201ENST00000449761 463 ntTSL 2 BASIC2.35□□□□□ -2.03
CLIP2Q9UDT6 AC004936.1-201ENST00000451755 361 ntTSL 3 BASIC2.35□□□□□ -2.03
CLIP2Q9UDT6 AC069528.1-201ENST00000490344 705 ntTSL 3 BASIC2.35□□□□□ -2.03
CLIP2Q9UDT6 AC116337.1-201ENST00000509680 687 ntBASIC2.35□□□□□ -2.03
CLIP2Q9UDT6 AC124854.1-202ENST00000513779 339 ntTSL 3 BASIC2.35□□□□□ -2.03
CLIP2Q9UDT6 AC090572.1-201ENST00000519251 160 ntBASIC2.35□□□□□ -2.03
CLIP2Q9UDT6 AC103794.1-201ENST00000531763 197 ntTSL 3 BASIC2.35□□□□□ -2.03
CLIP2Q9UDT6 SCOCP1-201ENST00000554676 349 ntBASIC2.35□□□□□ -2.03
CLIP2Q9UDT6 AC009754.1-201ENST00000566282 540 ntTSL 4 BASIC2.35□□□□□ -2.03
CLIP2Q9UDT6 MIR5089-201ENST00000580047 84 ntBASIC2.35□□□□□ -2.03
CLIP2Q9UDT6 SNRPGP19-201ENST00000603826 189 ntBASIC2.35□□□□□ -2.03
CLIP2Q9UDT6 BNIP3P10-201ENST00000605360 577 ntBASIC2.35□□□□□ -2.03
CLIP2Q9UDT6 AC087045.1-201ENST00000605856 382 ntBASIC2.35□□□□□ -2.03
CLIP2Q9UDT6 ZNFX1-AS1_2.1-201ENST00000610973 93 ntBASIC2.35□□□□□ -2.03
CLIP2Q9UDT6 U4atac.1-201ENST00000618345 95 ntBASIC2.35□□□□□ -2.03
CLIP2Q9UDT6 AC093648.1-201ENST00000623546 606 ntBASIC2.35□□□□□ -2.03
CLIP2Q9UDT6 AC090617.10-201ENST00000624308 134 ntBASIC2.35□□□□□ -2.03
CLIP2Q9UDT6 AP003400.5-201ENST00000624827 617 ntBASIC2.35□□□□□ -2.03
CLIP2Q9UDT6 PTP4A2-220ENST00000627328 615 ntTSL 5 BASIC2.35□□□□□ -2.03
CLIP2Q9UDT6 AL589740.1-207ENST00000607823 1962 ntTSL 5 BASIC2.34□□□□□ -2.03
CLIP2Q9UDT6 Y_RNA.142-201ENST00000363491 102 ntBASIC2.34□□□□□ -2.03
CLIP2Q9UDT6 FAM206A-202ENST00000374624 499 ntTSL 3 BASIC2.34□□□□□ -2.03
CLIP2Q9UDT6 BTLA-202ENST00000383680 726 ntAPPRIS ALT2 TSL 1 (best) BASIC2.34□□□□□ -2.03
CLIP2Q9UDT6 SNORA20.2-201ENST00000383922 131 ntBASIC2.34□□□□□ -2.03
CLIP2Q9UDT6 RN7SKP158-201ENST00000410453 326 ntBASIC2.34□□□□□ -2.03
CLIP2Q9UDT6 RNU2-39P-201ENST00000410604 198 ntBASIC2.34□□□□□ -2.03
CLIP2Q9UDT6 AC005062.1-207ENST00000418442 587 ntTSL 3 BASIC2.34□□□□□ -2.03
CLIP2Q9UDT6 U51244.1-201ENST00000423120 374 ntTSL 3 BASIC2.34□□□□□ -2.03
CLIP2Q9UDT6 AC016691.1-201ENST00000441321 413 ntBASIC2.34□□□□□ -2.03
CLIP2Q9UDT6 AC099566.1-201ENST00000442558 479 ntTSL 3 BASIC2.34□□□□□ -2.03
CLIP2Q9UDT6 NDUFB1P2-201ENST00000449477 176 ntBASIC2.34□□□□□ -2.03
CLIP2Q9UDT6 RNA5SP233-201ENST00000459153 113 ntBASIC2.34□□□□□ -2.03
CLIP2Q9UDT6 RNU6-261P-201ENST00000459506 102 ntBASIC2.34□□□□□ -2.03
CLIP2Q9UDT6 AC008539.1-201ENST00000507653 482 ntTSL 3 BASIC2.34□□□□□ -2.03
CLIP2Q9UDT6 AC008526.1-201ENST00000509149 338 ntBASIC2.34□□□□□ -2.03
CLIP2Q9UDT6 LRRC34P2-201ENST00000514850 553 ntBASIC2.34□□□□□ -2.03
CLIP2Q9UDT6 Y_RNA.675-201ENST00000516389 149 ntBASIC2.34□□□□□ -2.03
CLIP2Q9UDT6 RNU5B-3P-201ENST00000516601 115 ntBASIC2.34□□□□□ -2.03
CLIP2Q9UDT6 Y_RNA.701-201ENST00000516812 110 ntBASIC2.34□□□□□ -2.03
CLIP2Q9UDT6 RNA5SP364-201ENST00000516938 78 ntBASIC2.34□□□□□ -2.03
CLIP2Q9UDT6 AC068992.1-202ENST00000519280 270 ntTSL 3 BASIC2.34□□□□□ -2.03
CLIP2Q9UDT6 AC107953.1-201ENST00000522216 297 ntBASIC2.34□□□□□ -2.03
CLIP2Q9UDT6 AC023050.3-201ENST00000541142 333 ntBASIC2.34□□□□□ -2.03
CLIP2Q9UDT6 AC079598.5-201ENST00000547460 117 ntBASIC2.34□□□□□ -2.03
CLIP2Q9UDT6 AL352984.1-201ENST00000556949 276 ntTSL 3 BASIC2.34□□□□□ -2.03
CLIP2Q9UDT6 MIR3682-201ENST00000581338 84 ntBASIC2.34□□□□□ -2.03
CLIP2Q9UDT6 AL050343.2-201ENST00000607338 280 ntBASIC2.34□□□□□ -2.03
CLIP2Q9UDT6 AL132765.2-201ENST00000610812 351 ntBASIC2.34□□□□□ -2.03
CLIP2Q9UDT6 AC012409.4-201ENST00000612923 249 ntBASIC2.34□□□□□ -2.03
CLIP2Q9UDT6 AC009233.1-201ENST00000616477 371 ntBASIC2.34□□□□□ -2.03
CLIP2Q9UDT6 AL136221.1-201ENST00000621449 509 ntBASIC2.34□□□□□ -2.03
CLIP2Q9UDT6 HS1BP3-208ENST00000631166 78 ntTSL 5 BASIC2.34□□□□□ -2.03
CLIP2Q9UDT6 AC100810.6-201ENST00000638068 285 ntBASIC2.34□□□□□ -2.03
CLIP2Q9UDT6 OXR1-209ENST00000517566 4501 ntTSL 1 (best) BASIC2.34□□□□□ -2.04
CLIP2Q9UDT6 HSPA8P4-201ENST00000511877 1920 ntBASIC2.34□□□□□ -2.04
CLIP2Q9UDT6 MIR412-201ENST00000362142 91 ntBASIC2.33□□□□□ -2.04
CLIP2Q9UDT6 Y_RNA.22-201ENST00000362492 102 ntBASIC2.33□□□□□ -2.04
CLIP2Q9UDT6 Y_RNA.138-201ENST00000363462 102 ntBASIC2.33□□□□□ -2.04
CLIP2Q9UDT6 Y_RNA.184-201ENST00000363884 108 ntBASIC2.33□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 119.5 ms