Protein–RNA interactions for Protein: Q9UBQ0

VPS29, Vacuolar protein sorting-associated protein 29, humanhuman

Predictions only

Length 182 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29Q9UBQ0 RNU6-862P-201ENST00000362804 105 ntBASIC0.72□□□□□ -2.29
VPS29Q9UBQ0 RNU1-36P-201ENST00000365130 165 ntBASIC0.72□□□□□ -2.29
VPS29Q9UBQ0 RNU6-1179P-201ENST00000384667 107 ntBASIC0.72□□□□□ -2.29
VPS29Q9UBQ0 MIR146A-201ENST00000385201 99 ntBASIC0.72□□□□□ -2.29
VPS29Q9UBQ0 RNU6-1176P-201ENST00000390955 107 ntBASIC0.72□□□□□ -2.29
VPS29Q9UBQ0 AC095032.2-201ENST00000414923 418 ntTSL 2 BASIC0.72□□□□□ -2.29
VPS29Q9UBQ0 LINC01611-201ENST00000428896 477 ntTSL 5 BASIC0.72□□□□□ -2.29
VPS29Q9UBQ0 AC114485.1-201ENST00000447916 657 ntTSL 3 BASIC0.72□□□□□ -2.29
VPS29Q9UBQ0 MTND1P18-201ENST00000448191 573 ntBASIC0.72□□□□□ -2.29
VPS29Q9UBQ0 ATP5J2P3-201ENST00000451550 258 ntBASIC0.72□□□□□ -2.29
VPS29Q9UBQ0 ACA64.5-201ENST00000516207 127 ntBASIC0.72□□□□□ -2.29
VPS29Q9UBQ0 AC013828.2-201ENST00000532487 235 ntBASIC0.72□□□□□ -2.29
VPS29Q9UBQ0 AC068587.4-201ENST00000533893 186 ntBASIC0.72□□□□□ -2.29
VPS29Q9UBQ0 AC008088.1-201ENST00000580993 280 ntBASIC0.72□□□□□ -2.29
VPS29Q9UBQ0 AL451064.1-201ENST00000607718 471 ntBASIC0.72□□□□□ -2.29
VPS29Q9UBQ0 AC026585.1-201ENST00000619582 524 ntBASIC0.72□□□□□ -2.29
VPS29Q9UBQ0 AL138955.1-201ENST00000622881 1040 ntBASIC0.72□□□□□ -2.29
VPS29Q9UBQ0 MIR6767-201ENST00000637302 66 ntBASIC0.72□□□□□ -2.29
VPS29Q9UBQ0 AC068647.2-201ENST00000637380 353 ntBASIC0.72□□□□□ -2.29
VPS29Q9UBQ0 RNU6-78P-201ENST00000362897 107 ntBASIC0.71□□□□□ -2.3
VPS29Q9UBQ0 SNORA4.1-201ENST00000364263 144 ntBASIC0.71□□□□□ -2.3
VPS29Q9UBQ0 RNU6-438P-201ENST00000365561 103 ntBASIC0.71□□□□□ -2.3
VPS29Q9UBQ0 RNU6-723P-201ENST00000383973 107 ntBASIC0.71□□□□□ -2.3
VPS29Q9UBQ0 Y_RNA.472-201ENST00000384322 102 ntBASIC0.71□□□□□ -2.3
VPS29Q9UBQ0 MIR515-2-201ENST00000384883 83 ntBASIC0.71□□□□□ -2.3
VPS29Q9UBQ0 MIR515-1-201ENST00000384884 83 ntBASIC0.71□□□□□ -2.3
VPS29Q9UBQ0 AL137856.1-202ENST00000418238 422 ntTSL 3 BASIC0.71□□□□□ -2.3
VPS29Q9UBQ0 TRIM60P10Y-201ENST00000425589 751 ntBASIC0.71□□□□□ -2.3
VPS29Q9UBQ0 LINC00189-202ENST00000431661 308 ntTSL 5 BASIC0.71□□□□□ -2.3
VPS29Q9UBQ0 AL583803.1-201ENST00000454262 334 ntTSL 3 BASIC0.71□□□□□ -2.3
VPS29Q9UBQ0 ATP5EP1-201ENST00000510257 156 ntBASIC0.71□□□□□ -2.3
VPS29Q9UBQ0 RNU2-10P-201ENST00000516375 211 ntBASIC0.71□□□□□ -2.3
VPS29Q9UBQ0 AC023050.2-201ENST00000544968 387 ntBASIC0.71□□□□□ -2.3
VPS29Q9UBQ0 AC138625.2-201ENST00000563968 551 ntTSL 3 BASIC0.71□□□□□ -2.3
VPS29Q9UBQ0 BNIP3P8-201ENST00000597863 560 ntBASIC0.71□□□□□ -2.3
VPS29Q9UBQ0 AC107304.1-201ENST00000604229 296 ntBASIC0.71□□□□□ -2.3
VPS29Q9UBQ0 AC211469.2-201ENST00000605461 205 ntBASIC0.71□□□□□ -2.3
VPS29Q9UBQ0 AC108747.1-201ENST00000609508 535 ntBASIC0.71□□□□□ -2.3
VPS29Q9UBQ0 HOTAIRM1_5.1-201ENST00000619311 145 ntBASIC0.71□□□□□ -2.3
VPS29Q9UBQ0 AP000943.4-201ENST00000622912 357 ntBASIC0.71□□□□□ -2.3
VPS29Q9UBQ0 SENP7-207ENST00000394095 4945 ntAPPRIS P3 TSL 1 (best) BASIC0.71□□□□□ -2.3
VPS29Q9UBQ0 AL159152.1-201ENST00000635019 2587 ntBASIC0.7□□□□□ -2.3
VPS29Q9UBQ0 FABP12-201ENST00000360464 551 ntAPPRIS P1 TSL 1 (best) BASIC0.7□□□□□ -2.3
VPS29Q9UBQ0 SNORA32.2-201ENST00000384049 122 ntBASIC0.7□□□□□ -2.3
VPS29Q9UBQ0 MIR544A-201ENST00000384855 91 ntBASIC0.7□□□□□ -2.3
VPS29Q9UBQ0 AL356776.1-201ENST00000406574 447 ntBASIC0.7□□□□□ -2.3
VPS29Q9UBQ0 AL391863.2-201ENST00000411838 681 ntTSL 2 BASIC0.7□□□□□ -2.3
VPS29Q9UBQ0 ARL5AP1-201ENST00000418991 388 ntBASIC0.7□□□□□ -2.3
VPS29Q9UBQ0 PIGFP2-201ENST00000421400 651 ntBASIC0.7□□□□□ -2.3
VPS29Q9UBQ0 AC004941.2-201ENST00000427009 228 ntBASIC0.7□□□□□ -2.3
VPS29Q9UBQ0 MTCO3P29-201ENST00000432119 779 ntBASIC0.7□□□□□ -2.3
VPS29Q9UBQ0 DPP10-AS2-201ENST00000446992 624 ntTSL 5 BASIC0.7□□□□□ -2.3
VPS29Q9UBQ0 AC034244.1-201ENST00000507687 207 ntBASIC0.7□□□□□ -2.3
VPS29Q9UBQ0 AC116353.3-201ENST00000511215 249 ntBASIC0.7□□□□□ -2.3
VPS29Q9UBQ0 AF131216.2-201ENST00000512316 564 ntBASIC0.7□□□□□ -2.3
VPS29Q9UBQ0 MTCO3P28-201ENST00000513351 515 ntBASIC0.7□□□□□ -2.3
VPS29Q9UBQ0 RNA5SP102-201ENST00000516865 106 ntBASIC0.7□□□□□ -2.3
VPS29Q9UBQ0 AC100763.1-201ENST00000532735 522 ntTSL 3 BASIC0.7□□□□□ -2.3
VPS29Q9UBQ0 AC025580.2-205ENST00000559960 552 ntTSL 4 BASIC0.7□□□□□ -2.3
VPS29Q9UBQ0 BNIP3P10-201ENST00000605360 577 ntBASIC0.7□□□□□ -2.3
VPS29Q9UBQ0 AC108706.1-201ENST00000611053 297 ntBASIC0.7□□□□□ -2.3
VPS29Q9UBQ0 AC106800.4-201ENST00000614905 153 ntBASIC0.7□□□□□ -2.3
VPS29Q9UBQ0 AL121895.2-201ENST00000619558 447 ntBASIC0.7□□□□□ -2.3
VPS29Q9UBQ0 RMST_7.1-201ENST00000621935 268 ntBASIC0.7□□□□□ -2.3
VPS29Q9UBQ0 MIR96-201ENST00000362288 78 ntBASIC0.69□□□□□ -2.3
VPS29Q9UBQ0 RNU1-96P-201ENST00000364163 162 ntBASIC0.69□□□□□ -2.3
VPS29Q9UBQ0 MIR578-201ENST00000384828 96 ntBASIC0.69□□□□□ -2.3
VPS29Q9UBQ0 MIR100-201ENST00000385259 80 ntBASIC0.69□□□□□ -2.3
VPS29Q9UBQ0 RNU2-64P-201ENST00000411315 191 ntBASIC0.69□□□□□ -2.3
VPS29Q9UBQ0 AC069257.2-201ENST00000441819 155 ntBASIC0.69□□□□□ -2.3
VPS29Q9UBQ0 RPS26P45-201ENST00000471748 340 ntBASIC0.69□□□□□ -2.3
VPS29Q9UBQ0 LINC02464-201ENST00000552060 368 ntTSL 2 BASIC0.69□□□□□ -2.3
VPS29Q9UBQ0 AC008015.1-201ENST00000555505 465 ntBASIC0.69□□□□□ -2.3
VPS29Q9UBQ0 PNRC2-204ENST00000579103 171 ntTSL 2 BASIC0.69□□□□□ -2.3
VPS29Q9UBQ0 AL158032.1-201ENST00000605401 106 ntBASIC0.69□□□□□ -2.3
VPS29Q9UBQ0 AC144521.1-201ENST00000607148 956 ntBASIC0.69□□□□□ -2.3
VPS29Q9UBQ0 AC104073.3-201ENST00000610942 955 ntBASIC0.69□□□□□ -2.3
VPS29Q9UBQ0 RNU6-1192P-201ENST00000612197 107 ntBASIC0.69□□□□□ -2.3
VPS29Q9UBQ0 RNU6-489P-201ENST00000618289 107 ntBASIC0.69□□□□□ -2.3
VPS29Q9UBQ0 AC131159.1-201ENST00000621854 213 ntBASIC0.69□□□□□ -2.3
VPS29Q9UBQ0 AL356596.1-201ENST00000624230 379 ntBASIC0.69□□□□□ -2.3
VPS29Q9UBQ0 NPS-201ENST00000398023 270 ntAPPRIS P1 TSL 5 BASIC0.68□□□□□ -2.3
VPS29Q9UBQ0 AL136310.1-201ENST00000404926 654 ntBASIC0.68□□□□□ -2.3
VPS29Q9UBQ0 AC006461.1-201ENST00000412637 326 ntBASIC0.68□□□□□ -2.3
VPS29Q9UBQ0 AC010099.3-201ENST00000423896 409 ntBASIC0.68□□□□□ -2.3
VPS29Q9UBQ0 AL390774.2-201ENST00000423942 788 ntTSL 3 BASIC0.68□□□□□ -2.3
VPS29Q9UBQ0 AL591043.1-201ENST00000432461 424 ntBASIC0.68□□□□□ -2.3
VPS29Q9UBQ0 RPS4XP11-201ENST00000446897 772 ntBASIC0.68□□□□□ -2.3
VPS29Q9UBQ0 AC022447.4-201ENST00000504053 364 ntBASIC0.68□□□□□ -2.3
VPS29Q9UBQ0 AC145146.2-202ENST00000508118 326 ntTSL 3 BASIC0.68□□□□□ -2.3
VPS29Q9UBQ0 LINC02465-202ENST00000508724 503 ntTSL 3 BASIC0.68□□□□□ -2.3
VPS29Q9UBQ0 KRTAP13-6P-201ENST00000508999 371 ntBASIC0.68□□□□□ -2.3
VPS29Q9UBQ0 LINC02220-201ENST00000510065 270 ntTSL 5 BASIC0.68□□□□□ -2.3
VPS29Q9UBQ0 AC008852.1-201ENST00000510198 451 ntTSL 2 BASIC0.68□□□□□ -2.3
VPS29Q9UBQ0 AC010587.2-201ENST00000511727 448 ntBASIC0.68□□□□□ -2.3
VPS29Q9UBQ0 MTND3P5-201ENST00000512798 333 ntBASIC0.68□□□□□ -2.3
VPS29Q9UBQ0 PSMC1P5-201ENST00000512850 177 ntBASIC0.68□□□□□ -2.3
VPS29Q9UBQ0 MTND4LP25-201ENST00000570218 163 ntBASIC0.68□□□□□ -2.3
VPS29Q9UBQ0 AC110760.3-201ENST00000598794 467 ntBASIC0.68□□□□□ -2.3
VPS29Q9UBQ0 TLR6-205ENST00000610323 1443 ntTSL 5 BASIC0.68□□□□□ -2.3
Retrieved 100 of 98,524 protein–RNA pairs in 178 ms