Protein–RNA interactions for Protein: Q9P2D1

CHD7, Chromodomain-helicase-DNA-binding protein 7, humanhuman

Predictions only

Length 2,997 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD7Q9P2D1 ANKRD36BP2-206ENST00000575193 1245 ntBASIC-0.41□□□□□ -2.48
CHD7Q9P2D1 MIR3664-201ENST00000579074 99 ntBASIC-0.41□□□□□ -2.48
CHD7Q9P2D1 Z82243.1-201ENST00000609432 473 ntBASIC-0.41□□□□□ -2.48
CHD7Q9P2D1 MIR412-201ENST00000362142 91 ntBASIC-0.42□□□□□ -2.48
CHD7Q9P2D1 RNU6-1249P-201ENST00000363237 111 ntBASIC-0.42□□□□□ -2.48
CHD7Q9P2D1 SUGT1P1-201ENST00000379514 476 ntBASIC-0.42□□□□□ -2.48
CHD7Q9P2D1 RNU6-815P-201ENST00000384080 113 ntBASIC-0.42□□□□□ -2.48
CHD7Q9P2D1 RNU6-532P-201ENST00000384318 107 ntBASIC-0.42□□□□□ -2.48
CHD7Q9P2D1 Y_RNA.475-201ENST00000384345 101 ntBASIC-0.42□□□□□ -2.48
CHD7Q9P2D1 RNU6-163P-201ENST00000384396 106 ntBASIC-0.42□□□□□ -2.48
CHD7Q9P2D1 SNORD83B-201ENST00000386745 93 ntBASIC-0.42□□□□□ -2.48
CHD7Q9P2D1 AC079791.1-201ENST00000605356 973 ntBASIC-0.42□□□□□ -2.48
CHD7Q9P2D1 AC096586.2-201ENST00000610260 441 ntBASIC-0.42□□□□□ -2.48
CHD7Q9P2D1 Y_RNA.57-201ENST00000362806 113 ntBASIC-0.42□□□□□ -2.48
CHD7Q9P2D1 RNU6-969P-201ENST00000383900 105 ntBASIC-0.42□□□□□ -2.48
CHD7Q9P2D1 MIR593-201ENST00000384856 100 ntBASIC-0.42□□□□□ -2.48
CHD7Q9P2D1 DSTNP4-201ENST00000399472 474 ntBASIC-0.42□□□□□ -2.48
CHD7Q9P2D1 MIR1302-8-201ENST00000408342 128 ntBASIC-0.42□□□□□ -2.48
CHD7Q9P2D1 RNU6-1054P-201ENST00000411293 104 ntBASIC-0.42□□□□□ -2.48
CHD7Q9P2D1 AC064871.1-202ENST00000413954 382 ntTSL 5 BASIC-0.42□□□□□ -2.48
CHD7Q9P2D1 AL022396.1-201ENST00000427011 386 ntTSL 3 BASIC-0.42□□□□□ -2.48
CHD7Q9P2D1 NDUFA5P10-201ENST00000432147 357 ntBASIC-0.42□□□□□ -2.48
CHD7Q9P2D1 AL390879.2-204ENST00000438602 582 ntTSL 3 BASIC-0.42□□□□□ -2.48
CHD7Q9P2D1 MTCO3P18-201ENST00000440206 761 ntBASIC-0.42□□□□□ -2.48
CHD7Q9P2D1 LINC01851-201ENST00000443419 637 ntTSL 3 BASIC-0.42□□□□□ -2.48
CHD7Q9P2D1 HMGB1P30-201ENST00000492455 606 ntBASIC-0.42□□□□□ -2.48
CHD7Q9P2D1 AC048346.1-201ENST00000510247 144 ntBASIC-0.42□□□□□ -2.48
CHD7Q9P2D1 MIR5697-201ENST00000578045 78 ntBASIC-0.42□□□□□ -2.48
CHD7Q9P2D1 MTND5P33-201ENST00000571250 1450 ntBASIC-0.42□□□□□ -2.48
CHD7Q9P2D1 RPS26P48-201ENST00000491713 339 ntBASIC-0.42□□□□□ -2.48
CHD7Q9P2D1 RN7SKP19-201ENST00000516016 252 ntBASIC-0.42□□□□□ -2.48
CHD7Q9P2D1 AP003716.2-201ENST00000528260 108 ntBASIC-0.42□□□□□ -2.48
CHD7Q9P2D1 AP003715.1-201ENST00000532109 435 ntTSL 3 BASIC-0.42□□□□□ -2.48
CHD7Q9P2D1 SNHG14-219ENST00000553134 470 ntTSL 2 BASIC-0.42□□□□□ -2.48
CHD7Q9P2D1 AP003465.2-201ENST00000602571 373 ntBASIC-0.42□□□□□ -2.48
CHD7Q9P2D1 CTHRC1P1-201ENST00000605383 469 ntBASIC-0.42□□□□□ -2.48
CHD7Q9P2D1 AC019226.1-201ENST00000625666 515 ntBASIC-0.42□□□□□ -2.48
CHD7Q9P2D1 SNORA25B-201ENST00000365507 128 ntBASIC-0.43□□□□□ -2.48
CHD7Q9P2D1 RNU6-1067P-201ENST00000384752 107 ntBASIC-0.43□□□□□ -2.48
CHD7Q9P2D1 RNU6-360P-201ENST00000390944 104 ntBASIC-0.43□□□□□ -2.48
CHD7Q9P2D1 MIR892B-201ENST00000401279 77 ntBASIC-0.43□□□□□ -2.48
CHD7Q9P2D1 AL161935.2-201ENST00000414627 60 ntBASIC-0.43□□□□□ -2.48
CHD7Q9P2D1 PCDH9-AS2-201ENST00000419371 538 ntTSL 3 BASIC-0.43□□□□□ -2.48
CHD7Q9P2D1 AL512271.1-201ENST00000439878 434 ntTSL 3 BASIC-0.43□□□□□ -2.48
CHD7Q9P2D1 MTCYBP1-201ENST00000454315 1119 ntBASIC-0.43□□□□□ -2.48
CHD7Q9P2D1 MTCO3P10-201ENST00000455912 772 ntBASIC-0.43□□□□□ -2.48
CHD7Q9P2D1 MTCO3P7-201ENST00000510008 774 ntBASIC-0.43□□□□□ -2.48
CHD7Q9P2D1 MIR4743-201ENST00000584576 69 ntBASIC-0.43□□□□□ -2.48
CHD7Q9P2D1 AC005176.2-201ENST00000596933 147 ntBASIC-0.43□□□□□ -2.48
CHD7Q9P2D1 AL009028.1-201ENST00000604895 802 ntBASIC-0.43□□□□□ -2.48
CHD7Q9P2D1 AC007349.4-201ENST00000608114 532 ntBASIC-0.43□□□□□ -2.48
CHD7Q9P2D1 RNU6-858P-201ENST00000362436 107 ntBASIC-0.43□□□□□ -2.48
CHD7Q9P2D1 Y_RNA.180-201ENST00000363867 113 ntBASIC-0.43□□□□□ -2.48
CHD7Q9P2D1 SNORD14D-201ENST00000384390 87 ntBASIC-0.43□□□□□ -2.48
CHD7Q9P2D1 MDM2-208ENST00000393410 732 ntTSL 1 (best) BASIC-0.43□□□□□ -2.48
CHD7Q9P2D1 MDM2-210ENST00000393413 657 ntTSL 1 (best) BASIC-0.43□□□□□ -2.48
CHD7Q9P2D1 RNU6-233P-201ENST00000410845 141 ntBASIC-0.43□□□□□ -2.48
CHD7Q9P2D1 MED13P1-201ENST00000428342 171 ntBASIC-0.43□□□□□ -2.48
CHD7Q9P2D1 AF212831.1-201ENST00000430064 377 ntTSL 3 BASIC-0.43□□□□□ -2.48
CHD7Q9P2D1 ELOCP30-201ENST00000447108 299 ntBASIC-0.43□□□□□ -2.48
CHD7Q9P2D1 SNORA25.12-201ENST00000516202 82 ntBASIC-0.43□□□□□ -2.48
CHD7Q9P2D1 MDM2-221ENST00000517852 393 ntTSL 1 (best) BASIC-0.43□□□□□ -2.48
CHD7Q9P2D1 MDM2-233ENST00000545204 398 ntTSL 5 BASIC-0.43□□□□□ -2.48
CHD7Q9P2D1 SNORA77B-201ENST00000578179 125 ntBASIC-0.43□□□□□ -2.48
CHD7Q9P2D1 AC120349.1-201ENST00000599498 282 ntTSL 5 BASIC-0.43□□□□□ -2.48
CHD7Q9P2D1 FTX_3.1-201ENST00000610451 147 ntBASIC-0.43□□□□□ -2.48
CHD7Q9P2D1 AC092268.1-201ENST00000342691 405 ntBASIC-0.44□□□□□ -2.48
CHD7Q9P2D1 RNU2-3P-201ENST00000410144 191 ntBASIC-0.44□□□□□ -2.48
CHD7Q9P2D1 AP000473.1-201ENST00000413645 550 ntTSL 3 BASIC-0.44□□□□□ -2.48
CHD7Q9P2D1 INTS6L-AS1-201ENST00000430820 398 ntTSL 3 BASIC-0.44□□□□□ -2.48
CHD7Q9P2D1 AC009299.3-202ENST00000445372 538 ntTSL 3 BASIC-0.44□□□□□ -2.48
CHD7Q9P2D1 AC104164.3-201ENST00000467363 1258 ntBASIC-0.44□□□□□ -2.48
CHD7Q9P2D1 AC087071.2-201ENST00000483283 575 ntTSL 4 BASIC-0.44□□□□□ -2.48
CHD7Q9P2D1 RNU6-798P-201ENST00000516912 103 ntBASIC-0.44□□□□□ -2.48
CHD7Q9P2D1 RNU6-1092P-201ENST00000516955 87 ntBASIC-0.44□□□□□ -2.48
CHD7Q9P2D1 AC005951.2-201ENST00000576282 495 ntBASIC-0.44□□□□□ -2.48
CHD7Q9P2D1 LINC01068-202ENST00000620874 626 ntTSL 3 BASIC-0.44□□□□□ -2.48
CHD7Q9P2D1 AC024940.5-201ENST00000622889 474 ntBASIC-0.44□□□□□ -2.48
CHD7Q9P2D1 MT-ND4-201ENST00000361381 1378 ntAPPRIS P1 BASIC-0.44□□□□□ -2.48
CHD7Q9P2D1 AL162395.1-201ENST00000457882 422 ntBASIC-0.44□□□□□ -2.48
CHD7Q9P2D1 SNORA31.2-201ENST00000516019 134 ntBASIC-0.44□□□□□ -2.48
CHD7Q9P2D1 AC022861.1-201ENST00000522981 663 ntBASIC-0.44□□□□□ -2.48
CHD7Q9P2D1 AC108721.1-201ENST00000547088 348 ntTSL 3 BASIC-0.44□□□□□ -2.48
CHD7Q9P2D1 AL049870.4-201ENST00000555741 486 ntBASIC-0.44□□□□□ -2.48
CHD7Q9P2D1 AP000860.1-201ENST00000605250 559 ntBASIC-0.44□□□□□ -2.48
CHD7Q9P2D1 AL359697.1-201ENST00000624879 587 ntBASIC-0.44□□□□□ -2.48
CHD7Q9P2D1 MIR1246-201ENST00000636535 73 ntBASIC-0.44□□□□□ -2.48
CHD7Q9P2D1 CYLC2-204ENST00000612124 1817 ntAPPRIS P1 TSL 1 (best) BASIC-0.44□□□□□ -2.48
CHD7Q9P2D1 RNU4-46P-201ENST00000410818 138 ntBASIC-0.45□□□□□ -2.48
CHD7Q9P2D1 RNU6-370P-201ENST00000411008 104 ntBASIC-0.45□□□□□ -2.48
CHD7Q9P2D1 MTND4P32-201ENST00000437189 1237 ntBASIC-0.45□□□□□ -2.48
CHD7Q9P2D1 AC005094.1-201ENST00000440420 368 ntBASIC-0.45□□□□□ -2.48
CHD7Q9P2D1 HMGN2P26-201ENST00000463169 339 ntBASIC-0.45□□□□□ -2.48
CHD7Q9P2D1 AC113410.1-201ENST00000505029 247 ntBASIC-0.45□□□□□ -2.48
CHD7Q9P2D1 AC093303.1-201ENST00000514549 295 ntBASIC-0.45□□□□□ -2.48
CHD7Q9P2D1 RNU6-917P-201ENST00000516294 104 ntBASIC-0.45□□□□□ -2.48
CHD7Q9P2D1 RNU6ATAC22P-201ENST00000516794 89 ntBASIC-0.45□□□□□ -2.48
CHD7Q9P2D1 AC004160.1-210ENST00000599875 689 ntTSL 5 BASIC-0.45□□□□□ -2.48
CHD7Q9P2D1 AC117490.2-201ENST00000610042 594 ntBASIC-0.45□□□□□ -2.48
CHD7Q9P2D1 Y_RNA.86-201ENST00000363020 111 ntBASIC-0.45□□□□□ -2.48
Retrieved 100 of 98,524 protein–RNA pairs in 106.6 ms