Protein–RNA interactions for Protein: Q9H0I3

CCDC113, Coiled-coil domain-containing protein 113, humanhuman

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC113Q9H0I3 MIR153-2-201ENST00000385225 87 ntBASIC3.72□□□□□ -1.81
CCDC113Q9H0I3 AL592435.1-201ENST00000416401 469 ntTSL 3 BASIC3.72□□□□□ -1.81
CCDC113Q9H0I3 Z98742.2-201ENST00000431564 187 ntBASIC3.72□□□□□ -1.81
CCDC113Q9H0I3 RPL21P10-201ENST00000463521 490 ntBASIC3.72□□□□□ -1.81
CCDC113Q9H0I3 AIG1P1-201ENST00000503376 148 ntBASIC3.72□□□□□ -1.81
CCDC113Q9H0I3 SNORA40.14-201ENST00000516543 86 ntBASIC3.72□□□□□ -1.81
CCDC113Q9H0I3 RNU6-567P-201ENST00000516746 107 ntBASIC3.72□□□□□ -1.81
CCDC113Q9H0I3 AC109329.1-201ENST00000518744 317 ntBASIC3.72□□□□□ -1.81
CCDC113Q9H0I3 AC087362.1-201ENST00000527912 434 ntTSL 5 BASIC3.72□□□□□ -1.81
CCDC113Q9H0I3 AC126177.2-201ENST00000552154 452 ntTSL 3 BASIC3.72□□□□□ -1.81
CCDC113Q9H0I3 AC010928.2-201ENST00000588017 287 ntBASIC3.72□□□□□ -1.81
CCDC113Q9H0I3 AC012254.1-201ENST00000592747 200 ntTSL 3 BASIC3.72□□□□□ -1.81
CCDC113Q9H0I3 AC006557.5-201ENST00000603126 811 ntBASIC3.72□□□□□ -1.81
CCDC113Q9H0I3 AC104695.3-201ENST00000604052 296 ntBASIC3.72□□□□□ -1.81
CCDC113Q9H0I3 AC107294.3-201ENST00000609211 526 ntBASIC3.72□□□□□ -1.81
CCDC113Q9H0I3 SMAD5-AS1_2.1-201ENST00000617906 131 ntBASIC3.72□□□□□ -1.81
CCDC113Q9H0I3 AL591030.1-201ENST00000626131 627 ntTSL 3 BASIC3.72□□□□□ -1.81
CCDC113Q9H0I3 DNAH12-208ENST00000495027 12146 ntAPPRIS P1 TSL 5 BASIC3.71□□□□□ -1.82
CCDC113Q9H0I3 ARHGAP11A-207ENST00000565905 3318 ntTSL 2 BASIC3.71□□□□□ -1.82
CCDC113Q9H0I3 CASP1-201ENST00000353247 423 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
CCDC113Q9H0I3 Y_RNA.106-201ENST00000363189 100 ntBASIC3.71□□□□□ -1.82
CCDC113Q9H0I3 Y_RNA.526-201ENST00000384572 110 ntBASIC3.71□□□□□ -1.82
CCDC113Q9H0I3 AC007566.1-201ENST00000427458 643 ntTSL 5 BASIC3.71□□□□□ -1.82
CCDC113Q9H0I3 EHHADH-202ENST00000440662 656 ntTSL 3 BASIC3.71□□□□□ -1.82
CCDC113Q9H0I3 AC117465.1-201ENST00000457125 522 ntTSL 3 BASIC3.71□□□□□ -1.82
CCDC113Q9H0I3 LINC02374-202ENST00000515222 578 ntTSL 4 BASIC3.71□□□□□ -1.82
CCDC113Q9H0I3 PWRN1-209ENST00000568019 359 ntTSL 3 BASIC3.71□□□□□ -1.82
CCDC113Q9H0I3 MIR5571-201ENST00000577998 113 ntBASIC3.71□□□□□ -1.82
CCDC113Q9H0I3 MIR5188-201ENST00000583467 113 ntBASIC3.71□□□□□ -1.82
CCDC113Q9H0I3 MIR3136-201ENST00000583498 78 ntBASIC3.71□□□□□ -1.82
CCDC113Q9H0I3 RPS29P30-201ENST00000600975 111 ntBASIC3.71□□□□□ -1.82
CCDC113Q9H0I3 AC073410.2-201ENST00000603240 332 ntBASIC3.71□□□□□ -1.82
CCDC113Q9H0I3 IGKV1OR2-6-201ENST00000603485 277 ntBASIC3.71□□□□□ -1.82
CCDC113Q9H0I3 AC124312.5-201ENST00000604451 268 ntBASIC3.71□□□□□ -1.82
CCDC113Q9H0I3 AL078596.1-201ENST00000624856 447 ntBASIC3.71□□□□□ -1.82
CCDC113Q9H0I3 ZNF826P-207ENST00000622273 1910 ntBASIC3.71□□□□□ -1.82
CCDC113Q9H0I3 EFCAB3-202ENST00000450662 1694 ntTSL 5 BASIC3.71□□□□□ -1.82
CCDC113Q9H0I3 ADGRG4-203ENST00000394143 9931 ntAPPRIS P2 TSL 1 (best) BASIC3.71□□□□□ -1.82
CCDC113Q9H0I3 AC111000.4-202ENST00000505646 2648 ntTSL 2 BASIC3.71□□□□□ -1.82
CCDC113Q9H0I3 AL109809.4-201ENST00000603520 2185 ntBASIC3.7□□□□□ -1.82
CCDC113Q9H0I3 DMD-203ENST00000357033 13956 ntAPPRIS P3 TSL 1 (best) BASIC3.7□□□□□ -1.82
CCDC113Q9H0I3 DDX60L-207ENST00000505890 4568 ntTSL 2 BASIC3.7□□□□□ -1.82
CCDC113Q9H0I3 AL513302.2-201ENST00000562313 1842 ntBASIC3.7□□□□□ -1.82
CCDC113Q9H0I3 PRKG2-206ENST00000545647 3852 ntTSL 5 BASIC3.7□□□□□ -1.82
CCDC113Q9H0I3 HERC4-201ENST00000277817 4371 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
CCDC113Q9H0I3 VNN1-201ENST00000367928 3106 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
CCDC113Q9H0I3 RNU6-529P-201ENST00000363383 104 ntBASIC3.7□□□□□ -1.82
CCDC113Q9H0I3 SNORD115-32-201ENST00000364079 82 ntBASIC3.7□□□□□ -1.82
CCDC113Q9H0I3 SNORA36A-201ENST00000384221 132 ntBASIC3.7□□□□□ -1.82
CCDC113Q9H0I3 DEFB116-201ENST00000400549 309 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
CCDC113Q9H0I3 Y_RNA.592-201ENST00000410274 109 ntBASIC3.7□□□□□ -1.82
CCDC113Q9H0I3 ATP6V0E1P4-201ENST00000427294 242 ntBASIC3.7□□□□□ -1.82
CCDC113Q9H0I3 AC005160.1-201ENST00000432405 381 ntTSL 3 BASIC3.7□□□□□ -1.82
CCDC113Q9H0I3 AL592309.2-201ENST00000444647 607 ntTSL 5 BASIC3.7□□□□□ -1.82
CCDC113Q9H0I3 CHEK2P4-201ENST00000450340 246 ntBASIC3.7□□□□□ -1.82
CCDC113Q9H0I3 LINC01810-201ENST00000450397 411 ntTSL 3 BASIC3.7□□□□□ -1.82
CCDC113Q9H0I3 MTCO3P8-201ENST00000453691 755 ntBASIC3.7□□□□□ -1.82
CCDC113Q9H0I3 RN7SL601P-201ENST00000471221 293 ntBASIC3.7□□□□□ -1.82
CCDC113Q9H0I3 AC090525.1-201ENST00000479116 478 ntBASIC3.7□□□□□ -1.82
CCDC113Q9H0I3 AF186996.7-201ENST00000492781 209 ntBASIC3.7□□□□□ -1.82
CCDC113Q9H0I3 MRPS36P2-201ENST00000512569 299 ntBASIC3.7□□□□□ -1.82
CCDC113Q9H0I3 SNORA70.19-201ENST00000516717 90 ntBASIC3.7□□□□□ -1.82
CCDC113Q9H0I3 AC131274.4-201ENST00000577879 398 ntTSL 3 BASIC3.7□□□□□ -1.82
CCDC113Q9H0I3 MIR4765-201ENST00000585007 77 ntBASIC3.7□□□□□ -1.82
CCDC113Q9H0I3 AC103858.1-201ENST00000607019 476 ntTSL 3 BASIC3.7□□□□□ -1.82
CCDC113Q9H0I3 AC096577.2-201ENST00000611455 153 ntBASIC3.7□□□□□ -1.82
CCDC113Q9H0I3 AC104971.4-201ENST00000622763 249 ntTSL 5 BASIC3.7□□□□□ -1.82
CCDC113Q9H0I3 AC243829.7-201ENST00000633081 225 ntBASIC3.7□□□□□ -1.82
CCDC113Q9H0I3 SNORD98-201ENST00000636377 67 ntBASIC3.7□□□□□ -1.82
CCDC113Q9H0I3 DCLRE1A-202ENST00000369305 4241 ntAPPRIS P1 TSL 5 BASIC3.7□□□□□ -1.82
CCDC113Q9H0I3 COPS2-203ENST00000542928 1580 ntTSL 2 BASIC3.7□□□□□ -1.82
CCDC113Q9H0I3 ZNF804B-202ENST00000611114 3968 ntTSL 5 BASIC3.7□□□□□ -1.82
CCDC113Q9H0I3 MTND5P16-201ENST00000460269 1703 ntBASIC3.7□□□□□ -1.82
CCDC113Q9H0I3 DOPEY1-203ENST00000369739 7743 ntAPPRIS ALT1 TSL 1 (best) BASIC3.7□□□□□ -1.82
CCDC113Q9H0I3 AC091564.4-201ENST00000533934 2194 ntBASIC3.69□□□□□ -1.82
CCDC113Q9H0I3 AL359854.1-201ENST00000614203 1594 ntBASIC3.69□□□□□ -1.82
CCDC113Q9H0I3 RNU5B-2P-201ENST00000363036 113 ntBASIC3.69□□□□□ -1.82
CCDC113Q9H0I3 RNA5SP387-201ENST00000364226 106 ntBASIC3.69□□□□□ -1.82
CCDC113Q9H0I3 Y_RNA.645-201ENST00000391229 102 ntBASIC3.69□□□□□ -1.82
CCDC113Q9H0I3 UBA52P6-201ENST00000399822 382 ntBASIC3.69□□□□□ -1.82
CCDC113Q9H0I3 AL356057.3-201ENST00000402607 340 ntBASIC3.69□□□□□ -1.82
CCDC113Q9H0I3 CYCSP48-201ENST00000417124 323 ntBASIC3.69□□□□□ -1.82
CCDC113Q9H0I3 AC012306.1-201ENST00000423267 114 ntBASIC3.69□□□□□ -1.82
CCDC113Q9H0I3 TRIAP1P1-201ENST00000427062 225 ntBASIC3.69□□□□□ -1.82
CCDC113Q9H0I3 LINC00459-201ENST00000431656 376 ntTSL 2 BASIC3.69□□□□□ -1.82
CCDC113Q9H0I3 AC133865.1-201ENST00000438619 339 ntTSL 3 BASIC3.69□□□□□ -1.82
CCDC113Q9H0I3 RPS3AP12-201ENST00000443616 753 ntBASIC3.69□□□□□ -1.82
CCDC113Q9H0I3 AC006539.3-201ENST00000454258 129 ntBASIC3.69□□□□□ -1.82
CCDC113Q9H0I3 AC112492.4-201ENST00000456549 352 ntBASIC3.69□□□□□ -1.82
CCDC113Q9H0I3 ANXA2P1-201ENST00000505539 926 ntBASIC3.69□□□□□ -1.82
CCDC113Q9H0I3 SNORA25.11-201ENST00000515935 105 ntBASIC3.69□□□□□ -1.82
CCDC113Q9H0I3 AC022616.4-201ENST00000522985 181 ntBASIC3.69□□□□□ -1.82
CCDC113Q9H0I3 MAPK1-204ENST00000544786 951 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
CCDC113Q9H0I3 AL132819.1-201ENST00000555595 208 ntTSL 3 BASIC3.69□□□□□ -1.82
CCDC113Q9H0I3 AL157688.1-201ENST00000555990 369 ntTSL 3 BASIC3.69□□□□□ -1.82
CCDC113Q9H0I3 MIR4276-201ENST00000584832 70 ntBASIC3.69□□□□□ -1.82
CCDC113Q9H0I3 AC092070.3-201ENST00000596041 337 ntTSL 3 BASIC3.69□□□□□ -1.82
CCDC113Q9H0I3 AL133393.1-201ENST00000603277 287 ntBASIC3.69□□□□□ -1.82
CCDC113Q9H0I3 AL137843.1-201ENST00000605078 385 ntBASIC3.69□□□□□ -1.82
CCDC113Q9H0I3 AL138963.2-201ENST00000605137 226 ntBASIC3.69□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 114.9 ms