Protein–RNA interactions for Protein: Q9H0E7

USP44, Ubiquitin carboxyl-terminal hydrolase 44, humanhuman

Predictions only

Length 712 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP44Q9H0E7 RNU7-66P-201ENST00000459469 62 ntBASIC2.77□□□□□ -1.97
USP44Q9H0E7 RNU6-1037P-201ENST00000459571 107 ntBASIC2.77□□□□□ -1.97
USP44Q9H0E7 TRBV12-1-201ENST00000479785 344 ntBASIC2.77□□□□□ -1.97
USP44Q9H0E7 MTCO2P30-201ENST00000503662 364 ntBASIC2.77□□□□□ -1.97
USP44Q9H0E7 ANXA2P1-201ENST00000505539 926 ntBASIC2.77□□□□□ -1.97
USP44Q9H0E7 BMPR1B-AS1-201ENST00000510795 511 ntTSL 3 BASIC2.77□□□□□ -1.97
USP44Q9H0E7 AC115990.1-201ENST00000526957 301 ntBASIC2.77□□□□□ -1.97
USP44Q9H0E7 PSMA3P-201ENST00000555485 635 ntBASIC2.77□□□□□ -1.97
USP44Q9H0E7 MIR1273D-201ENST00000577266 86 ntBASIC2.77□□□□□ -1.97
USP44Q9H0E7 AP005062.1-201ENST00000581502 607 ntTSL 3 BASIC2.77□□□□□ -1.97
USP44Q9H0E7 MIR5692C1-201ENST00000585309 91 ntBASIC2.77□□□□□ -1.97
USP44Q9H0E7 AL136221.1-201ENST00000621449 509 ntBASIC2.77□□□□□ -1.97
USP44Q9H0E7 SLC4A7-201ENST00000295736 7757 ntAPPRIS P3 TSL 1 (best) BASIC2.76□□□□□ -1.97
USP44Q9H0E7 CEP70-211ENST00000484888 1993 ntAPPRIS P3 TSL 5 BASIC2.76□□□□□ -1.97
USP44Q9H0E7 ATP11C-201ENST00000327569 6115 ntAPPRIS P3 TSL 1 (best) BASIC2.76□□□□□ -1.97
USP44Q9H0E7 RNU6-1222P-201ENST00000384615 107 ntBASIC2.76□□□□□ -1.97
USP44Q9H0E7 RNA5SP425-201ENST00000410336 112 ntBASIC2.76□□□□□ -1.97
USP44Q9H0E7 UBE2V1P4-201ENST00000425374 344 ntBASIC2.76□□□□□ -1.97
USP44Q9H0E7 LINC02336-201ENST00000434117 330 ntTSL 3 BASIC2.76□□□□□ -1.97
USP44Q9H0E7 AC093083.1-201ENST00000438633 347 ntTSL 3 BASIC2.76□□□□□ -1.97
USP44Q9H0E7 AC007969.2-201ENST00000441891 191 ntBASIC2.76□□□□□ -1.97
USP44Q9H0E7 APOA2-205ENST00000468465 421 ntTSL 2 BASIC2.76□□□□□ -1.97
USP44Q9H0E7 AIG1P1-201ENST00000503376 148 ntBASIC2.76□□□□□ -1.97
USP44Q9H0E7 RNA5SP200-201ENST00000516360 103 ntBASIC2.76□□□□□ -1.97
USP44Q9H0E7 RNU6-323P-201ENST00000521915 107 ntBASIC2.76□□□□□ -1.97
USP44Q9H0E7 AC105245.1-201ENST00000581934 244 ntBASIC2.76□□□□□ -1.97
USP44Q9H0E7 MIR3199-1-201ENST00000582434 88 ntBASIC2.76□□□□□ -1.97
USP44Q9H0E7 AC073410.2-201ENST00000603240 332 ntBASIC2.76□□□□□ -1.97
USP44Q9H0E7 AL357078.3-201ENST00000607528 618 ntBASIC2.76□□□□□ -1.97
USP44Q9H0E7 uc_338.15-201ENST00000615470 191 ntBASIC2.76□□□□□ -1.97
USP44Q9H0E7 PARPBP-201ENST00000327680 3014 ntAPPRIS P1 TSL 2 BASIC2.76□□□□□ -1.97
USP44Q9H0E7 MAPK10-266ENST00000641066 6555 ntBASIC2.75□□□□□ -1.97
USP44Q9H0E7 SNORD56.1-201ENST00000362913 68 ntBASIC2.75□□□□□ -1.97
USP44Q9H0E7 Y_RNA.88-201ENST00000363029 99 ntBASIC2.75□□□□□ -1.97
USP44Q9H0E7 VTRNA1-1-201ENST00000363120 99 ntBASIC2.75□□□□□ -1.97
USP44Q9H0E7 Y_RNA.160-201ENST00000363677 92 ntBASIC2.75□□□□□ -1.97
USP44Q9H0E7 Y_RNA.303-201ENST00000364998 94 ntBASIC2.75□□□□□ -1.97
USP44Q9H0E7 AL023284.1-201ENST00000403956 276 ntBASIC2.75□□□□□ -1.97
USP44Q9H0E7 AC138393.2-201ENST00000414742 246 ntBASIC2.75□□□□□ -1.97
USP44Q9H0E7 MAMDC2-AS1-203ENST00000420573 339 ntTSL 3 BASIC2.75□□□□□ -1.97
USP44Q9H0E7 AL358234.1-201ENST00000421132 273 ntTSL 5 BASIC2.75□□□□□ -1.97
USP44Q9H0E7 AL355314.2-201ENST00000427182 436 ntTSL 3 BASIC2.75□□□□□ -1.97
USP44Q9H0E7 RPL7P12-201ENST00000446719 750 ntBASIC2.75□□□□□ -1.97
USP44Q9H0E7 AC112771.1-201ENST00000463581 102 ntBASIC2.75□□□□□ -1.97
USP44Q9H0E7 RPPH1-2P-201ENST00000516688 293 ntBASIC2.75□□□□□ -1.97
USP44Q9H0E7 AC090568.2-205ENST00000518631 576 ntTSL 4 BASIC2.75□□□□□ -1.97
USP44Q9H0E7 AC107953.1-201ENST00000522216 297 ntBASIC2.75□□□□□ -1.97
USP44Q9H0E7 AP000763.2-201ENST00000540641 163 ntBASIC2.75□□□□□ -1.97
USP44Q9H0E7 AC006504.5-204ENST00000592404 765 ntTSL 3 BASIC2.75□□□□□ -1.97
USP44Q9H0E7 FAM157A-202ENST00000615155 405 ntBASIC2.75□□□□□ -1.97
USP44Q9H0E7 AC009033.1-201ENST00000624279 431 ntBASIC2.75□□□□□ -1.97
USP44Q9H0E7 STX7-202ENST00000367941 15791 ntAPPRIS P1 TSL 1 (best) BASIC2.75□□□□□ -1.97
USP44Q9H0E7 TLK1-206ENST00000434911 2156 ntTSL 2 BASIC2.75□□□□□ -1.97
USP44Q9H0E7 AC135776.4-201ENST00000624300 1904 ntBASIC2.74□□□□□ -1.97
USP44Q9H0E7 OR5K1-202ENST00000642057 3466 ntAPPRIS P1 BASIC2.74□□□□□ -1.97
USP44Q9H0E7 RNU6-1252P-201ENST00000363054 104 ntBASIC2.74□□□□□ -1.97
USP44Q9H0E7 RNU6-254P-201ENST00000363377 107 ntBASIC2.74□□□□□ -1.97
USP44Q9H0E7 RNA5SP240-201ENST00000365355 128 ntBASIC2.74□□□□□ -1.97
USP44Q9H0E7 SNORA32.2-201ENST00000384049 122 ntBASIC2.74□□□□□ -1.97
USP44Q9H0E7 AL135786.1-201ENST00000415892 214 ntBASIC2.74□□□□□ -1.97
USP44Q9H0E7 RPL30P4-201ENST00000429309 333 ntBASIC2.74□□□□□ -1.97
USP44Q9H0E7 AL442638.1-201ENST00000443359 237 ntTSL 5 BASIC2.74□□□□□ -1.97
USP44Q9H0E7 AL360091.2-201ENST00000446847 650 ntTSL 5 BASIC2.74□□□□□ -1.97
USP44Q9H0E7 CYP2C59P-201ENST00000457790 269 ntBASIC2.74□□□□□ -1.97
USP44Q9H0E7 AC114801.2-201ENST00000503825 781 ntBASIC2.74□□□□□ -1.97
USP44Q9H0E7 AK3P2-201ENST00000507976 429 ntBASIC2.74□□□□□ -1.97
USP44Q9H0E7 AC025465.4-201ENST00000513422 638 ntBASIC2.74□□□□□ -1.97
USP44Q9H0E7 SCARNA16.3-201ENST00000516595 184 ntBASIC2.74□□□□□ -1.97
USP44Q9H0E7 AC118273.2-201ENST00000532092 465 ntBASIC2.74□□□□□ -1.97
USP44Q9H0E7 AL136038.2-201ENST00000553983 283 ntTSL 3 BASIC2.74□□□□□ -1.97
USP44Q9H0E7 MIR5739-201ENST00000619803 80 ntBASIC2.74□□□□□ -1.97
USP44Q9H0E7 C6orf10-201ENST00000375007 2125 ntAPPRIS ALT2 TSL 5 BASIC2.74□□□□□ -1.97
USP44Q9H0E7 CYSLTR1-203ENST00000614798 2681 ntAPPRIS P1 TSL 1 (best) BASIC2.74□□□□□ -1.97
USP44Q9H0E7 MCMDC2-201ENST00000313616 2043 ntTSL 2 BASIC2.73□□□□□ -1.97
USP44Q9H0E7 RNU1-91P-201ENST00000364746 163 ntBASIC2.73□□□□□ -1.97
USP44Q9H0E7 Y_RNA.279-201ENST00000364763 95 ntBASIC2.73□□□□□ -1.97
USP44Q9H0E7 Y_RNA.414-201ENST00000384011 101 ntBASIC2.73□□□□□ -1.97
USP44Q9H0E7 RNY3P14-201ENST00000384309 102 ntBASIC2.73□□□□□ -1.97
USP44Q9H0E7 RNU6-831P-201ENST00000384548 107 ntBASIC2.73□□□□□ -1.97
USP44Q9H0E7 SNORA64-201ENST00000384674 134 ntBASIC2.73□□□□□ -1.97
USP44Q9H0E7 MIR450B-201ENST00000401182 78 ntBASIC2.73□□□□□ -1.97
USP44Q9H0E7 EIF4EP4-201ENST00000424916 578 ntBASIC2.73□□□□□ -1.97
USP44Q9H0E7 AL031274.1-201ENST00000450334 232 ntBASIC2.73□□□□□ -1.97
USP44Q9H0E7 AC096733.1-201ENST00000503844 402 ntTSL 3 BASIC2.73□□□□□ -1.97
USP44Q9H0E7 SNORA20.3-201ENST00000516880 132 ntBASIC2.73□□□□□ -1.97
USP44Q9H0E7 RNA5SP402-201ENST00000517148 110 ntBASIC2.73□□□□□ -1.97
USP44Q9H0E7 AC145141.2-201ENST00000518473 501 ntTSL 3 BASIC2.73□□□□□ -1.97
USP44Q9H0E7 AC139497.1-201ENST00000524042 501 ntTSL 5 BASIC2.73□□□□□ -1.97
USP44Q9H0E7 MIR5002-201ENST00000584713 97 ntBASIC2.73□□□□□ -1.97
USP44Q9H0E7 HTN1-205ENST00000610341 536 ntAPPRIS P1 TSL 1 (best) BASIC2.73□□□□□ -1.97
USP44Q9H0E7 WT1-AS_8.1-201ENST00000615200 275 ntBASIC2.73□□□□□ -1.97
USP44Q9H0E7 AC009248.2-201ENST00000619826 254 ntBASIC2.73□□□□□ -1.97
USP44Q9H0E7 UHMK1-204ENST00000545294 8117 ntTSL 2 BASIC2.72□□□□□ -1.97
USP44Q9H0E7 SNX16-212ENST00000615066 1918 ntTSL 5 BASIC2.72□□□□□ -1.97
USP44Q9H0E7 AP000560.1-201ENST00000624150 1937 ntBASIC2.72□□□□□ -1.97
USP44Q9H0E7 CACNB4-228ENST00000636598 7808 ntTSL 5 BASIC2.72□□□□□ -1.97
USP44Q9H0E7 Y_RNA.72-201ENST00000362894 103 ntBASIC2.72□□□□□ -1.97
USP44Q9H0E7 Y_RNA.212-201ENST00000364177 102 ntBASIC2.72□□□□□ -1.97
USP44Q9H0E7 RNU6-336P-201ENST00000364891 107 ntBASIC2.72□□□□□ -1.97
USP44Q9H0E7 RNU6-1329P-201ENST00000365664 107 ntBASIC2.72□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 112.1 ms