Protein–RNA interactions for Protein: Q9BY12

SCAPER, S phase cyclin A-associated protein in the endoplasmic reticulum, humanhuman

Predictions only

Length 1,400 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCAPERQ9BY12 snoU13.27-201ENST00000459278 104 ntBASIC0.06□□□□□ -2.4
SCAPERQ9BY12 AC048334.1-201ENST00000477975 159 ntBASIC0.06□□□□□ -2.4
SCAPERQ9BY12 AC108733.1-201ENST00000479244 705 ntTSL 3 BASIC0.06□□□□□ -2.4
SCAPERQ9BY12 AC136618.2-201ENST00000575091 400 ntBASIC0.06□□□□□ -2.4
SCAPERQ9BY12 AC069114.2-201ENST00000604699 304 ntBASIC0.06□□□□□ -2.4
SCAPERQ9BY12 AC092106.3-201ENST00000611308 722 ntBASIC0.06□□□□□ -2.4
SCAPERQ9BY12 C1orf141-205ENST00000475209 2079 ntAPPRIS ALT2 TSL 5 BASIC0.06□□□□□ -2.4
SCAPERQ9BY12 SNORA63D-201ENST00000364359 132 ntBASIC0.05□□□□□ -2.4
SCAPERQ9BY12 RNU6-512P-201ENST00000364438 103 ntBASIC0.05□□□□□ -2.4
SCAPERQ9BY12 RNA5SP259-201ENST00000365541 109 ntBASIC0.05□□□□□ -2.4
SCAPERQ9BY12 SNORA4.3-201ENST00000365564 137 ntBASIC0.05□□□□□ -2.4
SCAPERQ9BY12 RNU6-1005P-201ENST00000384519 107 ntBASIC0.05□□□□□ -2.4
SCAPERQ9BY12 RNA5SP25-201ENST00000410815 110 ntBASIC0.05□□□□□ -2.4
SCAPERQ9BY12 RNA5SP111-201ENST00000411386 101 ntBASIC0.05□□□□□ -2.4
SCAPERQ9BY12 MTND1P21-201ENST00000412991 285 ntBASIC0.05□□□□□ -2.4
SCAPERQ9BY12 MTCO1P57-201ENST00000432182 261 ntBASIC0.05□□□□□ -2.4
SCAPERQ9BY12 AC015983.2-201ENST00000446053 472 ntTSL 3 BASIC0.05□□□□□ -2.4
SCAPERQ9BY12 RAD1P2-201ENST00000446414 663 ntBASIC0.05□□□□□ -2.4
SCAPERQ9BY12 AL512658.1-201ENST00000449072 533 ntTSL 3 BASIC0.05□□□□□ -2.4
SCAPERQ9BY12 AC114501.3-201ENST00000453648 164 ntTSL 5 BASIC0.05□□□□□ -2.4
SCAPERQ9BY12 MTND1P3-201ENST00000484956 952 ntBASIC0.05□□□□□ -2.4
SCAPERQ9BY12 LINC01487-202ENST00000490497 423 ntTSL 3 BASIC0.05□□□□□ -2.4
SCAPERQ9BY12 SNORD60.2-201ENST00000516883 86 ntBASIC0.05□□□□□ -2.4
SCAPERQ9BY12 AC025871.1-201ENST00000523935 443 ntTSL 2 BASIC0.05□□□□□ -2.4
SCAPERQ9BY12 AC026470.3-201ENST00000563994 438 ntTSL 3 BASIC0.05□□□□□ -2.4
SCAPERQ9BY12 AC090330.1-201ENST00000588646 764 ntBASIC0.05□□□□□ -2.4
SCAPERQ9BY12 RNU6-839P-201ENST00000363347 108 ntBASIC0.04□□□□□ -2.4
SCAPERQ9BY12 Y_RNA.170-201ENST00000363746 110 ntBASIC0.04□□□□□ -2.4
SCAPERQ9BY12 Y_RNA.332-201ENST00000365271 113 ntBASIC0.04□□□□□ -2.4
SCAPERQ9BY12 SNORA2A-201ENST00000383885 135 ntBASIC0.04□□□□□ -2.4
SCAPERQ9BY12 AL357139.1-201ENST00000407792 426 ntBASIC0.04□□□□□ -2.4
SCAPERQ9BY12 Y_RNA.597-201ENST00000410463 100 ntBASIC0.04□□□□□ -2.4
SCAPERQ9BY12 AL022718.1-201ENST00000412004 84 ntBASIC0.04□□□□□ -2.4
SCAPERQ9BY12 AL583859.1-201ENST00000455871 335 ntTSL 3 BASIC0.04□□□□□ -2.4
SCAPERQ9BY12 snoU13.8-201ENST00000458890 104 ntBASIC0.04□□□□□ -2.4
SCAPERQ9BY12 AC108740.1-201ENST00000498629 225 ntBASIC0.04□□□□□ -2.4
SCAPERQ9BY12 SUMO2P18-201ENST00000518873 252 ntBASIC0.04□□□□□ -2.4
SCAPERQ9BY12 AP000942.2-201ENST00000526310 628 ntTSL 3 BASIC0.04□□□□□ -2.4
SCAPERQ9BY12 AL390208.1-201ENST00000605885 644 ntBASIC0.04□□□□□ -2.4
SCAPERQ9BY12 MIR411-201ENST00000362239 96 ntBASIC0.04□□□□□ -2.4
SCAPERQ9BY12 RNU6-1019P-201ENST00000364424 107 ntBASIC0.04□□□□□ -2.4
SCAPERQ9BY12 RNU6-1327P-201ENST00000365302 105 ntBASIC0.04□□□□□ -2.4
SCAPERQ9BY12 RNU6-969P-201ENST00000383900 105 ntBASIC0.04□□□□□ -2.4
SCAPERQ9BY12 GRK5-IT1-201ENST00000421206 400 ntTSL 3 BASIC0.04□□□□□ -2.4
SCAPERQ9BY12 AL606662.1-201ENST00000445763 553 ntBASIC0.04□□□□□ -2.4
SCAPERQ9BY12 MTCYBP11-201ENST00000447254 1109 ntBASIC0.04□□□□□ -2.4
SCAPERQ9BY12 AC233266.1-201ENST00000454518 96 ntBASIC0.04□□□□□ -2.4
SCAPERQ9BY12 snoU13.30-201ENST00000458951 104 ntBASIC0.04□□□□□ -2.4
SCAPERQ9BY12 AL365273.2-201ENST00000491114 492 ntAPPRIS P1 TSL 5 BASIC0.04□□□□□ -2.4
SCAPERQ9BY12 AC010587.2-201ENST00000511727 448 ntBASIC0.04□□□□□ -2.4
SCAPERQ9BY12 AC027335.1-201ENST00000515377 543 ntTSL 4 BASIC0.04□□□□□ -2.4
SCAPERQ9BY12 AC090568.2-205ENST00000518631 576 ntTSL 4 BASIC0.04□□□□□ -2.4
SCAPERQ9BY12 AC022022.2-201ENST00000602989 360 ntBASIC0.04□□□□□ -2.4
SCAPERQ9BY12 AL451064.1-201ENST00000607718 471 ntBASIC0.04□□□□□ -2.4
SCAPERQ9BY12 AC242852.1-201ENST00000612151 96 ntBASIC0.04□□□□□ -2.4
SCAPERQ9BY12 AL163051.2-201ENST00000618976 735 ntBASIC0.04□□□□□ -2.4
SCAPERQ9BY12 AC244015.1-201ENST00000622301 99 ntBASIC0.04□□□□□ -2.4
SCAPERQ9BY12 RNU6-359P-201ENST00000365466 108 ntBASIC0.03□□□□□ -2.41
SCAPERQ9BY12 SNORA80D-201ENST00000384488 135 ntBASIC0.03□□□□□ -2.41
SCAPERQ9BY12 Y_RNA.549-201ENST00000384657 102 ntBASIC0.03□□□□□ -2.41
SCAPERQ9BY12 AF228730.1-201ENST00000397972 663 ntBASIC0.03□□□□□ -2.41
SCAPERQ9BY12 MTCYBP1-201ENST00000454315 1119 ntBASIC0.03□□□□□ -2.41
SCAPERQ9BY12 AL353752.1-201ENST00000454946 260 ntBASIC0.03□□□□□ -2.41
SCAPERQ9BY12 RPL39P38-201ENST00000467018 153 ntBASIC0.03□□□□□ -2.41
SCAPERQ9BY12 RPS3A-208ENST00000509736 576 ntTSL 2 BASIC0.03□□□□□ -2.41
SCAPERQ9BY12 RNU6-760P-201ENST00000516078 97 ntBASIC0.03□□□□□ -2.41
SCAPERQ9BY12 RNU6-390P-201ENST00000516259 103 ntBASIC0.03□□□□□ -2.41
SCAPERQ9BY12 AC118942.1-202ENST00000529081 578 ntTSL 5 BASIC0.03□□□□□ -2.41
SCAPERQ9BY12 AL442163.3-201ENST00000554110 156 ntBASIC0.03□□□□□ -2.41
SCAPERQ9BY12 MIR3529-201ENST00000637713 78 ntBASIC0.03□□□□□ -2.41
SCAPERQ9BY12 SNRPEP3-201ENST00000338402 276 ntBASIC0.02□□□□□ -2.41
SCAPERQ9BY12 U3.9-201ENST00000363823 204 ntBASIC0.02□□□□□ -2.41
SCAPERQ9BY12 RNU6-843P-201ENST00000384454 104 ntBASIC0.02□□□□□ -2.41
SCAPERQ9BY12 LINC01934-201ENST00000414750 391 ntTSL 3 BASIC0.02□□□□□ -2.41
SCAPERQ9BY12 MTCO3P45-201ENST00000443036 613 ntBASIC0.02□□□□□ -2.41
SCAPERQ9BY12 LINC00345-201ENST00000443679 285 ntTSL 5 BASIC0.02□□□□□ -2.41
SCAPERQ9BY12 RPL39P6-201ENST00000448289 150 ntBASIC0.02□□□□□ -2.41
SCAPERQ9BY12 AC012308.1-201ENST00000451232 178 ntBASIC0.02□□□□□ -2.41
SCAPERQ9BY12 AC103798.1-201ENST00000532562 376 ntTSL 2 BASIC0.02□□□□□ -2.41
SCAPERQ9BY12 LINC02398-201ENST00000536666 431 ntTSL 3 BASIC0.02□□□□□ -2.41
SCAPERQ9BY12 AC008759.3-201ENST00000613300 508 ntBASIC0.02□□□□□ -2.41
SCAPERQ9BY12 Hammerhead_HH9.1-201ENST00000616606 77 ntBASIC0.02□□□□□ -2.41
SCAPERQ9BY12 AC084824.4-201ENST00000620106 731 ntBASIC0.02□□□□□ -2.41
SCAPERQ9BY12 AC111000.4-202ENST00000505646 2648 ntTSL 2 BASIC0.02□□□□□ -2.41
SCAPERQ9BY12 OR4P4-201ENST00000314612 939 ntAPPRIS P1 BASIC0.01□□□□□ -2.41
SCAPERQ9BY12 RNU6-858P-201ENST00000362436 107 ntBASIC0.01□□□□□ -2.41
SCAPERQ9BY12 SNORD114-16-201ENST00000363044 70 ntBASIC0.01□□□□□ -2.41
SCAPERQ9BY12 AC007314.1-201ENST00000414538 565 ntTSL 4 BASIC0.01□□□□□ -2.41
SCAPERQ9BY12 FABP5P4-201ENST00000437203 171 ntBASIC0.01□□□□□ -2.41
SCAPERQ9BY12 AC245047.7-201ENST00000440265 293 ntBASIC0.01□□□□□ -2.41
SCAPERQ9BY12 snoU13.14-201ENST00000459372 104 ntBASIC0.01□□□□□ -2.41
SCAPERQ9BY12 MED28P2-201ENST00000475771 317 ntBASIC0.01□□□□□ -2.41
SCAPERQ9BY12 LAMTOR3P2-201ENST00000504479 232 ntBASIC0.01□□□□□ -2.41
SCAPERQ9BY12 SNORA68.3-201ENST00000515906 83 ntBASIC0.01□□□□□ -2.41
SCAPERQ9BY12 MIR4637-201ENST00000582405 84 ntBASIC0.01□□□□□ -2.41
SCAPERQ9BY12 AC133794.1-201ENST00000602731 914 ntBASIC0.01□□□□□ -2.41
SCAPERQ9BY12 AL158032.1-201ENST00000605401 106 ntBASIC0.01□□□□□ -2.41
SCAPERQ9BY12 AL360219.1-201ENST00000610230 366 ntBASIC0.01□□□□□ -2.41
SCAPERQ9BY12 AL357075.2-201ENST00000614906 189 ntBASIC0.01□□□□□ -2.41
SCAPERQ9BY12 MIR371B-201ENST00000638082 66 ntBASIC0.01□□□□□ -2.41
Retrieved 100 of 98,524 protein–RNA pairs in 116.8 ms