Protein–RNA interactions for Protein: Q9BTX1

NDC1, Nucleoporin NDC1, humanhuman

Predictions only

Length 674 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDC1Q9BTX1 SLC8A1-207ENST00000406785 20987 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
NDC1Q9BTX1 SNORA20.1-201ENST00000364790 130 ntBASIC3.28□□□□□ -1.88
NDC1Q9BTX1 RNU4-9P-201ENST00000364951 139 ntBASIC3.28□□□□□ -1.88
NDC1Q9BTX1 RN7SKP111-201ENST00000410349 271 ntBASIC3.28□□□□□ -1.88
NDC1Q9BTX1 AC074117.2-201ENST00000417130 397 ntBASIC3.28□□□□□ -1.88
NDC1Q9BTX1 INTS6-AS1-201ENST00000434512 466 ntTSL 3 BASIC3.28□□□□□ -1.88
NDC1Q9BTX1 AL031659.1-201ENST00000447075 539 ntBASIC3.28□□□□□ -1.88
NDC1Q9BTX1 SSXP4-201ENST00000451349 245 ntBASIC3.28□□□□□ -1.88
NDC1Q9BTX1 AC010099.1-201ENST00000455434 375 ntBASIC3.28□□□□□ -1.88
NDC1Q9BTX1 RPL23AP75-201ENST00000491601 451 ntBASIC3.28□□□□□ -1.88
NDC1Q9BTX1 LINC02374-202ENST00000515222 578 ntTSL 4 BASIC3.28□□□□□ -1.88
NDC1Q9BTX1 Y_RNA.673-201ENST00000516306 88 ntBASIC3.28□□□□□ -1.88
NDC1Q9BTX1 RN7SKP272-201ENST00000516988 232 ntBASIC3.28□□□□□ -1.88
NDC1Q9BTX1 IGHVII-53-1-201ENST00000519538 255 ntBASIC3.28□□□□□ -1.88
NDC1Q9BTX1 AL356133.2-201ENST00000521572 371 ntTSL 3 BASIC3.28□□□□□ -1.88
NDC1Q9BTX1 AL160262.1-201ENST00000522264 254 ntTSL 3 BASIC3.28□□□□□ -1.88
NDC1Q9BTX1 AP000867.2-201ENST00000532468 320 ntBASIC3.28□□□□□ -1.88
NDC1Q9BTX1 AC006199.1-201ENST00000548728 219 ntBASIC3.28□□□□□ -1.88
NDC1Q9BTX1 AC090510.1-201ENST00000567456 425 ntTSL 3 BASIC3.28□□□□□ -1.88
NDC1Q9BTX1 AC009163.5-201ENST00000575421 637 ntBASIC3.28□□□□□ -1.88
NDC1Q9BTX1 AC012433.1-201ENST00000588916 398 ntBASIC3.28□□□□□ -1.88
NDC1Q9BTX1 AC019159.1-201ENST00000605094 187 ntBASIC3.28□□□□□ -1.88
NDC1Q9BTX1 MIR8058-201ENST00000615737 89 ntBASIC3.28□□□□□ -1.88
NDC1Q9BTX1 AC141273.2-201ENST00000618989 130 ntBASIC3.28□□□□□ -1.88
NDC1Q9BTX1 CATSPERB-201ENST00000256343 3623 ntAPPRIS P2 TSL 1 (best) BASIC3.28□□□□□ -1.88
NDC1Q9BTX1 OR51L1-203ENST00000641819 7300 ntAPPRIS P1 BASIC3.28□□□□□ -1.88
NDC1Q9BTX1 NBPF20-201ENST00000369373 18760 ntAPPRIS ALT2 TSL 5 BASIC3.28□□□□□ -1.88
NDC1Q9BTX1 RTKN2-201ENST00000315289 2383 ntTSL 2 BASIC3.27□□□□□ -1.89
NDC1Q9BTX1 LUZP2-208ENST00000620308 4981 ntTSL 5 BASIC3.27□□□□□ -1.89
NDC1Q9BTX1 SLC9C1-205ENST00000487372 3979 ntAPPRIS ALT2 TSL 1 (best) BASIC3.27□□□□□ -1.89
NDC1Q9BTX1 RNU6-212P-201ENST00000362642 104 ntBASIC3.27□□□□□ -1.89
NDC1Q9BTX1 Y_RNA.84-201ENST00000363011 104 ntBASIC3.27□□□□□ -1.89
NDC1Q9BTX1 RNU6-968P-201ENST00000384076 107 ntBASIC3.27□□□□□ -1.89
NDC1Q9BTX1 RNY3P4-201ENST00000384428 101 ntBASIC3.27□□□□□ -1.89
NDC1Q9BTX1 MIR215-201ENST00000384858 110 ntBASIC3.27□□□□□ -1.89
NDC1Q9BTX1 U3.19-201ENST00000390893 196 ntBASIC3.27□□□□□ -1.89
NDC1Q9BTX1 RNU6-1203P-201ENST00000410703 110 ntBASIC3.27□□□□□ -1.89
NDC1Q9BTX1 RNU2-25P-201ENST00000411041 191 ntBASIC3.27□□□□□ -1.89
NDC1Q9BTX1 Z92545.1-201ENST00000411782 234 ntBASIC3.27□□□□□ -1.89
NDC1Q9BTX1 AC239803.1-203ENST00000411978 452 ntTSL 2 BASIC3.27□□□□□ -1.89
NDC1Q9BTX1 AL513008.1-201ENST00000412701 161 ntTSL 5 BASIC3.27□□□□□ -1.89
NDC1Q9BTX1 AC069257.1-202ENST00000425275 422 ntTSL 3 BASIC3.27□□□□□ -1.89
NDC1Q9BTX1 SDAD1P3-201ENST00000427380 333 ntBASIC3.27□□□□□ -1.89
NDC1Q9BTX1 AC009296.1-201ENST00000443146 155 ntBASIC3.27□□□□□ -1.89
NDC1Q9BTX1 LINC01810-201ENST00000450397 411 ntTSL 3 BASIC3.27□□□□□ -1.89
NDC1Q9BTX1 AC006539.3-201ENST00000454258 129 ntBASIC3.27□□□□□ -1.89
NDC1Q9BTX1 MED28P2-201ENST00000475771 317 ntBASIC3.27□□□□□ -1.89
NDC1Q9BTX1 RPL30P1-201ENST00000488676 339 ntBASIC3.27□□□□□ -1.89
NDC1Q9BTX1 AC097462.2-201ENST00000504623 481 ntBASIC3.27□□□□□ -1.89
NDC1Q9BTX1 MIR2355-201ENST00000517199 87 ntBASIC3.27□□□□□ -1.89
NDC1Q9BTX1 AC007375.1-201ENST00000554513 578 ntBASIC3.27□□□□□ -1.89
NDC1Q9BTX1 AL133383.1-201ENST00000569292 901 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
NDC1Q9BTX1 AC090617.3-201ENST00000573670 475 ntBASIC3.27□□□□□ -1.89
NDC1Q9BTX1 AL109918.3-201ENST00000603072 338 ntBASIC3.27□□□□□ -1.89
NDC1Q9BTX1 AC006111.3-201ENST00000622137 383 ntBASIC3.27□□□□□ -1.89
NDC1Q9BTX1 MYOT-201ENST00000239926 2337 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
NDC1Q9BTX1 VPS13C-203ENST00000395896 14579 ntAPPRIS ALT2 TSL 1 (best) BASIC3.26□□□□□ -1.89
NDC1Q9BTX1 ZNF83-201ENST00000301096 2599 ntAPPRIS P1 TSL 3 BASIC3.26□□□□□ -1.89
NDC1Q9BTX1 MGAT4C-211ENST00000621808 2582 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
NDC1Q9BTX1 LRFN5-204ENST00000554171 4253 ntAPPRIS ALT2 TSL 1 (best) BASIC3.26□□□□□ -1.89
NDC1Q9BTX1 AC068647.1-201ENST00000489539 2265 ntBASIC3.26□□□□□ -1.89
NDC1Q9BTX1 NEB-218ENST00000603639 25578 ntAPPRIS ALT2 TSL 5 BASIC3.26□□□□□ -1.89
NDC1Q9BTX1 NEB-219ENST00000604864 25578 ntAPPRIS ALT2 TSL 5 BASIC3.26□□□□□ -1.89
NDC1Q9BTX1 RNU6-198P-201ENST00000384258 104 ntBASIC3.26□□□□□ -1.89
NDC1Q9BTX1 RNA5SP38-201ENST00000410750 119 ntBASIC3.26□□□□□ -1.89
NDC1Q9BTX1 EIF1AXP1-201ENST00000419267 435 ntBASIC3.26□□□□□ -1.89
NDC1Q9BTX1 AC069079.1-201ENST00000419889 400 ntTSL 3 BASIC3.26□□□□□ -1.89
NDC1Q9BTX1 AC139712.2-201ENST00000424302 339 ntBASIC3.26□□□□□ -1.89
NDC1Q9BTX1 AL714022.1-201ENST00000439897 151 ntBASIC3.26□□□□□ -1.89
NDC1Q9BTX1 AL353705.4-201ENST00000449661 238 ntBASIC3.26□□□□□ -1.89
NDC1Q9BTX1 HMGN2P7-201ENST00000456186 273 ntBASIC3.26□□□□□ -1.89
NDC1Q9BTX1 RPL23AP67-201ENST00000465341 474 ntBASIC3.26□□□□□ -1.89
NDC1Q9BTX1 AP002884.2-201ENST00000471647 395 ntBASIC3.26□□□□□ -1.89
NDC1Q9BTX1 HMGB1P35-201ENST00000503360 598 ntBASIC3.26□□□□□ -1.89
NDC1Q9BTX1 AC091874.1-201ENST00000511402 339 ntBASIC3.26□□□□□ -1.89
NDC1Q9BTX1 IGKV2-26-201ENST00000518305 343 ntBASIC3.26□□□□□ -1.89
NDC1Q9BTX1 AP000873.2-206ENST00000529811 429 ntTSL 2 BASIC3.26□□□□□ -1.89
NDC1Q9BTX1 AC113146.1-202ENST00000560259 433 ntTSL 5 BASIC3.26□□□□□ -1.89
NDC1Q9BTX1 AL356157.2-201ENST00000605122 111 ntBASIC3.26□□□□□ -1.89
NDC1Q9BTX1 RPL23AP88-201ENST00000605759 454 ntBASIC3.26□□□□□ -1.89
NDC1Q9BTX1 AP001282.2-201ENST00000616149 309 ntBASIC3.26□□□□□ -1.89
NDC1Q9BTX1 HOTTIP_4.1-201ENST00000618195 165 ntBASIC3.26□□□□□ -1.89
NDC1Q9BTX1 SCARNA4-201ENST00000629045 128 ntBASIC3.26□□□□□ -1.89
NDC1Q9BTX1 MIR3651-201ENST00000630427 90 ntBASIC3.26□□□□□ -1.89
NDC1Q9BTX1 MIR3529-201ENST00000637713 78 ntBASIC3.26□□□□□ -1.89
NDC1Q9BTX1 MIR7153-201ENST00000637758 57 ntBASIC3.26□□□□□ -1.89
NDC1Q9BTX1 TLR10-206ENST00000508334 2616 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
NDC1Q9BTX1 FAM214A-216ENST00000619572 3548 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
NDC1Q9BTX1 TECRL-202ENST00000507440 2876 ntTSL 5 BASIC3.26□□□□□ -1.89
NDC1Q9BTX1 MBNL1-218ENST00000485910 4257 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
NDC1Q9BTX1 LMBRD1-201ENST00000370570 2099 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
NDC1Q9BTX1 EVI2A-201ENST00000247270 1860 ntAPPRIS P3 TSL 2 BASIC3.25□□□□□ -1.89
NDC1Q9BTX1 RNU6-222P-201ENST00000362438 107 ntBASIC3.25□□□□□ -1.89
NDC1Q9BTX1 RNA5SP295-201ENST00000362655 121 ntBASIC3.25□□□□□ -1.89
NDC1Q9BTX1 snoU2_19.2-201ENST00000363024 80 ntBASIC3.25□□□□□ -1.89
NDC1Q9BTX1 RNU6-1286P-201ENST00000383871 107 ntBASIC3.25□□□□□ -1.89
NDC1Q9BTX1 Y_RNA.439-201ENST00000384119 94 ntBASIC3.25□□□□□ -1.89
NDC1Q9BTX1 TRAV34-201ENST00000390461 349 ntAPPRIS P1 BASIC3.25□□□□□ -1.89
NDC1Q9BTX1 ATP6V0E1P4-201ENST00000427294 242 ntBASIC3.25□□□□□ -1.89
NDC1Q9BTX1 AL357552.1-201ENST00000445254 415 ntBASIC3.25□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 137.9 ms