Protein–RNA interactions for Protein: Q9BTN0

LRFN3, Leucine-rich repeat and fibronectin type-III domain-containing protein 3, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN3Q9BTN0 MYCBP2-211ENST00000544440 14664 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
LRFN3Q9BTN0 ATF2-204ENST00000409437 3697 ntTSL 5 BASIC3.4□□□□□ -1.86
LRFN3Q9BTN0 RNU6-858P-201ENST00000362436 107 ntBASIC3.4□□□□□ -1.87
LRFN3Q9BTN0 RNU6-942P-201ENST00000363002 107 ntBASIC3.4□□□□□ -1.87
LRFN3Q9BTN0 RNU4-42P-201ENST00000364738 142 ntBASIC3.4□□□□□ -1.87
LRFN3Q9BTN0 RNU6-596P-201ENST00000365395 98 ntBASIC3.4□□□□□ -1.87
LRFN3Q9BTN0 Y_RNA.350-201ENST00000365409 98 ntBASIC3.4□□□□□ -1.87
LRFN3Q9BTN0 RNU6-19P-201ENST00000384718 107 ntBASIC3.4□□□□□ -1.87
LRFN3Q9BTN0 Y_RNA.577-201ENST00000384794 101 ntBASIC3.4□□□□□ -1.87
LRFN3Q9BTN0 NPS-201ENST00000398023 270 ntAPPRIS P1 TSL 5 BASIC3.4□□□□□ -1.87
LRFN3Q9BTN0 RNU6-174P-201ENST00000410406 106 ntBASIC3.4□□□□□ -1.87
LRFN3Q9BTN0 AC023141.4-201ENST00000412031 328 ntBASIC3.4□□□□□ -1.87
LRFN3Q9BTN0 PTGES3P4-201ENST00000426243 356 ntBASIC3.4□□□□□ -1.87
LRFN3Q9BTN0 AL133396.1-201ENST00000432048 687 ntBASIC3.4□□□□□ -1.87
LRFN3Q9BTN0 AL353997.1-201ENST00000432936 108 ntBASIC3.4□□□□□ -1.87
LRFN3Q9BTN0 CXorf51B-201ENST00000438525 436 ntAPPRIS P1 TSL 2 BASIC3.4□□□□□ -1.87
LRFN3Q9BTN0 AC020743.3-201ENST00000440351 360 ntTSL 3 BASIC3.4□□□□□ -1.87
LRFN3Q9BTN0 ZNF680-202ENST00000447137 2159 ntTSL 2 BASIC3.4□□□□□ -1.87
LRFN3Q9BTN0 PCMTD1P1-201ENST00000455560 355 ntBASIC3.4□□□□□ -1.87
LRFN3Q9BTN0 snoU13.23-201ENST00000458863 104 ntBASIC3.4□□□□□ -1.87
LRFN3Q9BTN0 snoU13.15-201ENST00000459407 104 ntBASIC3.4□□□□□ -1.87
LRFN3Q9BTN0 AC107626.1-201ENST00000471084 183 ntBASIC3.4□□□□□ -1.87
LRFN3Q9BTN0 MRPL42P6-201ENST00000486397 371 ntBASIC3.4□□□□□ -1.87
LRFN3Q9BTN0 AC018437.1-201ENST00000492214 406 ntBASIC3.4□□□□□ -1.87
LRFN3Q9BTN0 AC022447.4-201ENST00000504053 364 ntBASIC3.4□□□□□ -1.87
LRFN3Q9BTN0 AC024022.1-202ENST00000508911 394 ntTSL 2 BASIC3.4□□□□□ -1.87
LRFN3Q9BTN0 RNU5F-8P-201ENST00000515941 111 ntBASIC3.4□□□□□ -1.87
LRFN3Q9BTN0 RNU6-581P-201ENST00000516214 105 ntBASIC3.4□□□□□ -1.87
LRFN3Q9BTN0 SNORA40.14-201ENST00000516543 86 ntBASIC3.4□□□□□ -1.87
LRFN3Q9BTN0 RNA5SP367-201ENST00000516557 118 ntBASIC3.4□□□□□ -1.87
LRFN3Q9BTN0 RNU4ATAC6P-201ENST00000516592 126 ntBASIC3.4□□□□□ -1.87
LRFN3Q9BTN0 IGHV3-76-201ENST00000522465 295 ntBASIC3.4□□□□□ -1.87
LRFN3Q9BTN0 AP005436.2-201ENST00000528458 252 ntTSL 5 BASIC3.4□□□□□ -1.87
LRFN3Q9BTN0 AC090877.1-201ENST00000561418 344 ntBASIC3.4□□□□□ -1.87
LRFN3Q9BTN0 AC016597.1-201ENST00000564893 528 ntTSL 4 BASIC3.4□□□□□ -1.87
LRFN3Q9BTN0 AL122017.1-202ENST00000570612 319 ntTSL 5 BASIC3.4□□□□□ -1.87
LRFN3Q9BTN0 AC009163.5-201ENST00000575421 637 ntBASIC3.4□□□□□ -1.87
LRFN3Q9BTN0 AC118755.2-201ENST00000584676 212 ntTSL 3 BASIC3.4□□□□□ -1.87
LRFN3Q9BTN0 AL512605.2-201ENST00000592972 256 ntBASIC3.4□□□□□ -1.87
LRFN3Q9BTN0 BX546450.2-201ENST00000602419 435 ntTSL 5 BASIC3.4□□□□□ -1.87
LRFN3Q9BTN0 MIR663AHG-231ENST00000609044 590 ntTSL 5 BASIC3.4□□□□□ -1.87
LRFN3Q9BTN0 TNPO1P3-201ENST00000436471 2662 ntBASIC3.4□□□□□ -1.87
LRFN3Q9BTN0 HTR2B-201ENST00000258400 2246 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
LRFN3Q9BTN0 OR2L2-203ENST00000642011 4225 ntAPPRIS P1 BASIC3.4□□□□□ -1.87
LRFN3Q9BTN0 AC010615.1-201ENST00000594254 1764 ntBASIC3.4□□□□□ -1.87
LRFN3Q9BTN0 FKTN-209ENST00000602661 2576 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
LRFN3Q9BTN0 ROCK1P1-203ENST00000608049 2457 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
LRFN3Q9BTN0 RBBP8-202ENST00000360790 2962 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
LRFN3Q9BTN0 C6orf10-202ENST00000375015 2173 ntAPPRIS ALT2 TSL 5 BASIC3.39□□□□□ -1.87
LRFN3Q9BTN0 AC091564.4-201ENST00000533934 2194 ntBASIC3.39□□□□□ -1.87
LRFN3Q9BTN0 MUC19-205ENST00000454784 24775 ntTSL 5 BASIC3.39□□□□□ -1.87
LRFN3Q9BTN0 AC062016.1-201ENST00000355719 319 ntBASIC3.39□□□□□ -1.87
LRFN3Q9BTN0 Y_RNA.48-201ENST00000362710 103 ntBASIC3.39□□□□□ -1.87
LRFN3Q9BTN0 RNA5SP322-201ENST00000363617 119 ntBASIC3.39□□□□□ -1.87
LRFN3Q9BTN0 Y_RNA.214-201ENST00000364201 112 ntBASIC3.39□□□□□ -1.87
LRFN3Q9BTN0 RNU6-1027P-201ENST00000383998 107 ntBASIC3.39□□□□□ -1.87
LRFN3Q9BTN0 Y_RNA.483-201ENST00000384380 101 ntBASIC3.39□□□□□ -1.87
LRFN3Q9BTN0 RNU6-748P-201ENST00000384648 107 ntBASIC3.39□□□□□ -1.87
LRFN3Q9BTN0 MIR1302-6-201ENST00000408466 90 ntBASIC3.39□□□□□ -1.87
LRFN3Q9BTN0 RNU6-1156P-201ENST00000410365 100 ntBASIC3.39□□□□□ -1.87
LRFN3Q9BTN0 AL030996.1-201ENST00000411430 235 ntBASIC3.39□□□□□ -1.87
LRFN3Q9BTN0 EEF1A1P41-201ENST00000414667 207 ntBASIC3.39□□□□□ -1.87
LRFN3Q9BTN0 LINC00428-201ENST00000415620 227 ntTSL 5 BASIC3.39□□□□□ -1.87
LRFN3Q9BTN0 DAP3P1-201ENST00000441522 278 ntBASIC3.39□□□□□ -1.87
LRFN3Q9BTN0 AL109933.2-201ENST00000452651 260 ntBASIC3.39□□□□□ -1.87
LRFN3Q9BTN0 AC133134.1-201ENST00000466800 359 ntBASIC3.39□□□□□ -1.87
LRFN3Q9BTN0 AC095059.1-201ENST00000502570 349 ntTSL 5 BASIC3.39□□□□□ -1.87
LRFN3Q9BTN0 RN7SKP132-201ENST00000516001 208 ntBASIC3.39□□□□□ -1.87
LRFN3Q9BTN0 RNU6-991P-201ENST00000516168 107 ntBASIC3.39□□□□□ -1.87
LRFN3Q9BTN0 ACA59.2-201ENST00000517061 156 ntBASIC3.39□□□□□ -1.87
LRFN3Q9BTN0 AC087664.2-201ENST00000522898 551 ntTSL 4 BASIC3.39□□□□□ -1.87
LRFN3Q9BTN0 AC005476.1-201ENST00000554427 397 ntBASIC3.39□□□□□ -1.87
LRFN3Q9BTN0 MSMB-202ENST00000582163 488 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
LRFN3Q9BTN0 AC020895.1-201ENST00000595362 272 ntBASIC3.39□□□□□ -1.87
LRFN3Q9BTN0 AL121917.1-203ENST00000605534 577 ntBASIC3.39□□□□□ -1.87
LRFN3Q9BTN0 AL138825.1-201ENST00000618587 192 ntBASIC3.39□□□□□ -1.87
LRFN3Q9BTN0 AC141273.2-201ENST00000618989 130 ntBASIC3.39□□□□□ -1.87
LRFN3Q9BTN0 AC010889.1-201ENST00000566193 2666 ntBASIC3.39□□□□□ -1.87
LRFN3Q9BTN0 ZMYM1-210ENST00000611874 4466 ntAPPRIS P1 TSL 2 BASIC3.39□□□□□ -1.87
LRFN3Q9BTN0 AC110774.1-201ENST00000623567 2018 ntBASIC3.39□□□□□ -1.87
LRFN3Q9BTN0 GABRG2-229ENST00000641017 3628 ntBASIC3.39□□□□□ -1.87
LRFN3Q9BTN0 DMD-201ENST00000288447 3856 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
LRFN3Q9BTN0 MAPK10-373ENST00000641983 6772 ntBASIC3.38□□□□□ -1.87
LRFN3Q9BTN0 PRKG2-206ENST00000545647 3852 ntTSL 5 BASIC3.38□□□□□ -1.87
LRFN3Q9BTN0 TFEC-201ENST00000265440 6628 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
LRFN3Q9BTN0 POSTN-202ENST00000379743 3196 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
LRFN3Q9BTN0 RPL9P7-201ENST00000330965 580 ntBASIC3.38□□□□□ -1.87
LRFN3Q9BTN0 RNY3P11-201ENST00000364153 102 ntBASIC3.38□□□□□ -1.87
LRFN3Q9BTN0 Y_RNA.276-201ENST00000364732 109 ntBASIC3.38□□□□□ -1.87
LRFN3Q9BTN0 RNU1-89P-201ENST00000384592 164 ntBASIC3.38□□□□□ -1.87
LRFN3Q9BTN0 RPS29P13-201ENST00000402041 169 ntBASIC3.38□□□□□ -1.87
LRFN3Q9BTN0 FTH1P15-201ENST00000406984 280 ntBASIC3.38□□□□□ -1.87
LRFN3Q9BTN0 RNU6ATAC15P-201ENST00000408279 121 ntBASIC3.38□□□□□ -1.87
LRFN3Q9BTN0 AL513008.1-201ENST00000412701 161 ntTSL 5 BASIC3.38□□□□□ -1.87
LRFN3Q9BTN0 AC017079.2-201ENST00000416102 485 ntBASIC3.38□□□□□ -1.87
LRFN3Q9BTN0 ELOCP20-201ENST00000422460 345 ntBASIC3.38□□□□□ -1.87
LRFN3Q9BTN0 AL513043.1-201ENST00000439124 535 ntBASIC3.38□□□□□ -1.87
LRFN3Q9BTN0 ITCH-AS1-201ENST00000454205 299 ntTSL 5 BASIC3.38□□□□□ -1.87
LRFN3Q9BTN0 RPL9P9-202ENST00000466501 579 ntBASIC3.38□□□□□ -1.87
LRFN3Q9BTN0 MED28P2-201ENST00000475771 317 ntBASIC3.38□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 165.5 ms