Protein–RNA interactions for Protein: Q99958

FOXC2, Forkhead box protein C2, humanhuman

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXC2Q99958 NBR2-204ENST00000587322 63 ntBASIC1.61□□□□□ -2.15
FOXC2Q99958 AC068790.2-201ENST00000602601 557 ntBASIC1.61□□□□□ -2.15
FOXC2Q99958 AL391646.1-201ENST00000603860 190 ntBASIC1.61□□□□□ -2.15
FOXC2Q99958 AC025449.1-201ENST00000603896 529 ntBASIC1.61□□□□□ -2.15
FOXC2Q99958 APOOP1-201ENST00000604695 592 ntBASIC1.61□□□□□ -2.15
FOXC2Q99958 TMEM154-204ENST00000613578 486 ntAPPRIS ALT2 TSL 5 BASIC1.61□□□□□ -2.15
FOXC2Q99958 AC005296.1-201ENST00000616145 209 ntBASIC1.61□□□□□ -2.15
FOXC2Q99958 RMST_4.1-201ENST00000616886 107 ntBASIC1.61□□□□□ -2.15
FOXC2Q99958 SCARNA4-202ENST00000625402 129 ntBASIC1.61□□□□□ -2.15
FOXC2Q99958 ZNF644-212ENST00000621077 2056 ntTSL 5 BASIC1.61□□□□□ -2.15
FOXC2Q99958 MIPOL1-203ENST00000537471 5954 ntAPPRIS P1 TSL 5 BASIC1.61□□□□□ -2.15
FOXC2Q99958 MIR29C-201ENST00000385231 88 ntBASIC1.6□□□□□ -2.15
FOXC2Q99958 TRDJ2-201ENST00000390475 54 ntAPPRIS P1 BASIC1.6□□□□□ -2.15
FOXC2Q99958 Y_RNA.582-201ENST00000391023 95 ntBASIC1.6□□□□□ -2.15
FOXC2Q99958 RNU6-550P-201ENST00000391057 101 ntBASIC1.6□□□□□ -2.15
FOXC2Q99958 CBX3P9-201ENST00000402326 552 ntBASIC1.6□□□□□ -2.15
FOXC2Q99958 RNU2-3P-201ENST00000410144 191 ntBASIC1.6□□□□□ -2.15
FOXC2Q99958 RNA5SP338-201ENST00000410495 85 ntBASIC1.6□□□□□ -2.15
FOXC2Q99958 RNU2-23P-201ENST00000410545 195 ntBASIC1.6□□□□□ -2.15
FOXC2Q99958 CYCSP33-201ENST00000414485 327 ntBASIC1.6□□□□□ -2.15
FOXC2Q99958 AC104462.1-201ENST00000414565 447 ntTSL 2 BASIC1.6□□□□□ -2.15
FOXC2Q99958 AC074117.2-201ENST00000417130 397 ntBASIC1.6□□□□□ -2.15
FOXC2Q99958 FO680682.1-201ENST00000421261 345 ntTSL 3 BASIC1.6□□□□□ -2.15
FOXC2Q99958 AC083900.1-201ENST00000421964 469 ntTSL 2 BASIC1.6□□□□□ -2.15
FOXC2Q99958 MTCO2P19-201ENST00000427513 598 ntBASIC1.6□□□□□ -2.15
FOXC2Q99958 AL669831.1-202ENST00000428504 417 ntBASIC1.6□□□□□ -2.15
FOXC2Q99958 LINC00844-201ENST00000432535 477 ntTSL 2 BASIC1.6□□□□□ -2.15
FOXC2Q99958 AC092573.2-202ENST00000437243 336 ntTSL 3 BASIC1.6□□□□□ -2.15
FOXC2Q99958 GTF2IP13-201ENST00000438487 386 ntBASIC1.6□□□□□ -2.15
FOXC2Q99958 RPL23AP7-203ENST00000449021 469 ntBASIC1.6□□□□□ -2.15
FOXC2Q99958 AC004936.1-201ENST00000451755 361 ntTSL 3 BASIC1.6□□□□□ -2.15
FOXC2Q99958 AL021397.1-201ENST00000451806 248 ntBASIC1.6□□□□□ -2.15
FOXC2Q99958 AL356010.1-201ENST00000456364 102 ntBASIC1.6□□□□□ -2.15
FOXC2Q99958 AC006026.2-201ENST00000457376 180 ntBASIC1.6□□□□□ -2.15
FOXC2Q99958 snoU13.14-201ENST00000459372 104 ntBASIC1.6□□□□□ -2.15
FOXC2Q99958 AL121594.1-201ENST00000475906 575 ntBASIC1.6□□□□□ -2.15
FOXC2Q99958 SUB1-206ENST00000506237 908 ntAPPRIS P1 TSL 2 BASIC1.6□□□□□ -2.15
FOXC2Q99958 AC108078.1-201ENST00000508073 725 ntBASIC1.6□□□□□ -2.15
FOXC2Q99958 AC104806.1-201ENST00000508720 308 ntBASIC1.6□□□□□ -2.15
FOXC2Q99958 AC008700.1-202ENST00000513657 468 ntTSL 5 BASIC1.6□□□□□ -2.15
FOXC2Q99958 RNU1-86P-201ENST00000516108 154 ntBASIC1.6□□□□□ -2.15
FOXC2Q99958 RNU1-107P-201ENST00000516617 154 ntBASIC1.6□□□□□ -2.15
FOXC2Q99958 RNU6-250P-201ENST00000516958 103 ntBASIC1.6□□□□□ -2.15
FOXC2Q99958 AC114550.2-201ENST00000524008 397 ntTSL 3 BASIC1.6□□□□□ -2.15
FOXC2Q99958 OR5AL2P-201ENST00000532185 920 ntBASIC1.6□□□□□ -2.15
FOXC2Q99958 AC027018.1-202ENST00000534723 383 ntTSL 3 BASIC1.6□□□□□ -2.15
FOXC2Q99958 AP000763.2-201ENST00000540641 163 ntBASIC1.6□□□□□ -2.15
FOXC2Q99958 MIR4255-201ENST00000579351 72 ntBASIC1.6□□□□□ -2.15
FOXC2Q99958 AC090897.2-201ENST00000581715 130 ntBASIC1.6□□□□□ -2.15
FOXC2Q99958 AC073539.2-201ENST00000597113 165 ntBASIC1.6□□□□□ -2.15
FOXC2Q99958 DEFB131E-202ENST00000602581 683 ntBASIC1.6□□□□□ -2.15
FOXC2Q99958 AL512598.1-201ENST00000610158 273 ntBASIC1.6□□□□□ -2.15
FOXC2Q99958 AL132822.1-201ENST00000617063 513 ntBASIC1.6□□□□□ -2.15
FOXC2Q99958 AC048344.4-201ENST00000619744 527 ntBASIC1.6□□□□□ -2.15
FOXC2Q99958 AC098657.3-201ENST00000620434 263 ntBASIC1.6□□□□□ -2.15
FOXC2Q99958 AC005609.4-201ENST00000625071 447 ntBASIC1.6□□□□□ -2.15
FOXC2Q99958 CFHR4-204ENST00000608469 1601 ntTSL 1 (best) BASIC1.59□□□□□ -2.15
FOXC2Q99958 CEP162-201ENST00000257766 5063 ntTSL 1 (best) BASIC1.59□□□□□ -2.15
FOXC2Q99958 OR4G2P-201ENST00000328113 903 ntBASIC1.59□□□□□ -2.15
FOXC2Q99958 MT-CYB-201ENST00000361789 1141 ntAPPRIS P1 BASIC1.59□□□□□ -2.15
FOXC2Q99958 RNU6-1120P-201ENST00000362988 108 ntBASIC1.59□□□□□ -2.15
FOXC2Q99958 RNU6-546P-201ENST00000383991 107 ntBASIC1.59□□□□□ -2.15
FOXC2Q99958 SNORD116-20-201ENST00000384529 92 ntBASIC1.59□□□□□ -2.15
FOXC2Q99958 SNORA8-201ENST00000384574 139 ntBASIC1.59□□□□□ -2.15
FOXC2Q99958 RNU6-1179P-201ENST00000384667 107 ntBASIC1.59□□□□□ -2.15
FOXC2Q99958 RNA5SP212-201ENST00000391223 107 ntBASIC1.59□□□□□ -2.15
FOXC2Q99958 AL356432.1-201ENST00000405809 419 ntBASIC1.59□□□□□ -2.15
FOXC2Q99958 RNU2-32P-201ENST00000411193 191 ntBASIC1.59□□□□□ -2.15
FOXC2Q99958 RNU6-607P-201ENST00000411283 108 ntBASIC1.59□□□□□ -2.15
FOXC2Q99958 AL513008.1-201ENST00000412701 161 ntTSL 5 BASIC1.59□□□□□ -2.15
FOXC2Q99958 MTATP6P18-201ENST00000417994 673 ntBASIC1.59□□□□□ -2.15
FOXC2Q99958 AC244636.1-201ENST00000421152 228 ntBASIC1.59□□□□□ -2.15
FOXC2Q99958 USP9YP14-201ENST00000430663 563 ntBASIC1.59□□□□□ -2.15
FOXC2Q99958 AL365400.1-201ENST00000431854 640 ntBASIC1.59□□□□□ -2.15
FOXC2Q99958 AL596276.1-201ENST00000434465 418 ntBASIC1.59□□□□□ -2.15
FOXC2Q99958 MTND2P29-201ENST00000438595 412 ntBASIC1.59□□□□□ -2.15
FOXC2Q99958 AL359636.3-201ENST00000439471 301 ntTSL 2 BASIC1.59□□□□□ -2.15
FOXC2Q99958 AL162395.1-201ENST00000457882 422 ntBASIC1.59□□□□□ -2.15
FOXC2Q99958 AC022364.2-201ENST00000457963 554 ntBASIC1.59□□□□□ -2.15
FOXC2Q99958 RNU7-182P-201ENST00000459009 62 ntBASIC1.59□□□□□ -2.15
FOXC2Q99958 AC025033.1-201ENST00000463883 194 ntBASIC1.59□□□□□ -2.15
FOXC2Q99958 GMFBP1-201ENST00000467831 427 ntBASIC1.59□□□□□ -2.15
FOXC2Q99958 AC117394.2-201ENST00000487827 323 ntTSL 3 BASIC1.59□□□□□ -2.15
FOXC2Q99958 HMGB1P29-201ENST00000505659 499 ntBASIC1.59□□□□□ -2.15
FOXC2Q99958 MTND2P33-201ENST00000506452 1031 ntBASIC1.59□□□□□ -2.15
FOXC2Q99958 AP003392.2-201ENST00000527269 208 ntBASIC1.59□□□□□ -2.15
FOXC2Q99958 MTCO3P23-201ENST00000561363 289 ntBASIC1.59□□□□□ -2.15
FOXC2Q99958 AP005057.1-201ENST00000583827 574 ntTSL 4 BASIC1.59□□□□□ -2.15
FOXC2Q99958 AC002984.1-201ENST00000591692 448 ntBASIC1.59□□□□□ -2.15
FOXC2Q99958 BX248123.2-201ENST00000606318 124 ntBASIC1.59□□□□□ -2.15
FOXC2Q99958 Z99129.1-201ENST00000612510 255 ntBASIC1.59□□□□□ -2.15
FOXC2Q99958 uc_338.11-201ENST00000619132 160 ntBASIC1.59□□□□□ -2.15
FOXC2Q99958 Metazoa_SRP.32-201ENST00000622685 286 ntBASIC1.59□□□□□ -2.15
FOXC2Q99958 SEPT14P19-203ENST00000633205 211 ntBASIC1.59□□□□□ -2.15
FOXC2Q99958 UHRF1BP1L-203ENST00000545232 4088 ntTSL 1 (best) BASIC1.59□□□□□ -2.15
FOXC2Q99958 LRIF1-203ENST00000494675 1912 ntAPPRIS ALT2 TSL 2 BASIC1.58□□□□□ -2.16
FOXC2Q99958 ZNF680P1-201ENST00000436625 1469 ntBASIC1.58□□□□□ -2.16
FOXC2Q99958 RNU6-1210P-201ENST00000363775 107 ntBASIC1.58□□□□□ -2.16
FOXC2Q99958 SNORA62.1-201ENST00000364287 154 ntBASIC1.58□□□□□ -2.16
FOXC2Q99958 RNU6-1029P-201ENST00000384109 107 ntBASIC1.58□□□□□ -2.16
Retrieved 100 of 98,524 protein–RNA pairs in 103.4 ms