Protein–RNA interactions for Protein: Q99536

VAT1, Synaptic vesicle membrane protein VAT-1 homolog, humanhuman

Predictions only

Length 393 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAT1Q99536 OR5AK2-201ENST00000326855 996 ntAPPRIS P1 BASIC1.16□□□□□ -2.22
VAT1Q99536 MIR340-201ENST00000362125 95 ntBASIC1.16□□□□□ -2.22
VAT1Q99536 MIR26B-201ENST00000362251 77 ntBASIC1.16□□□□□ -2.22
VAT1Q99536 RNU6-26P-201ENST00000383985 107 ntBASIC1.16□□□□□ -2.22
VAT1Q99536 AC123900.1-201ENST00000420390 96 ntBASIC1.16□□□□□ -2.22
VAT1Q99536 AC245517.4-201ENST00000448601 281 ntBASIC1.16□□□□□ -2.22
VAT1Q99536 ODF2L-216ENST00000486215 311 ntTSL 2 BASIC1.16□□□□□ -2.22
VAT1Q99536 AC022447.4-201ENST00000504053 364 ntBASIC1.16□□□□□ -2.22
VAT1Q99536 AC097473.1-201ENST00000508142 408 ntBASIC1.16□□□□□ -2.22
VAT1Q99536 AC096711.1-201ENST00000510967 347 ntTSL 5 BASIC1.16□□□□□ -2.22
VAT1Q99536 RNU6-902P-201ENST00000517212 91 ntBASIC1.16□□□□□ -2.22
VAT1Q99536 AC120042.2-201ENST00000521556 667 ntTSL 2 BASIC1.16□□□□□ -2.22
VAT1Q99536 AC087883.1-201ENST00000551882 391 ntBASIC1.16□□□□□ -2.22
VAT1Q99536 HMGN1P30-201ENST00000589286 268 ntBASIC1.16□□□□□ -2.22
VAT1Q99536 DCAF17-212ENST00000611110 975 ntTSL 1 (best) BASIC1.16□□□□□ -2.22
VAT1Q99536 AC138749.5-201ENST00000611461 208 ntBASIC1.16□□□□□ -2.22
VAT1Q99536 AC116165.2-201ENST00000616705 206 ntBASIC1.16□□□□□ -2.22
VAT1Q99536 AC009878.1-201ENST00000621819 340 ntBASIC1.16□□□□□ -2.22
VAT1Q99536 Z69720.2-201ENST00000624755 279 ntBASIC1.16□□□□□ -2.22
VAT1Q99536 RNU6-414P-201ENST00000363705 104 ntBASIC1.15□□□□□ -2.23
VAT1Q99536 RNU6-105P-201ENST00000363909 104 ntBASIC1.15□□□□□ -2.23
VAT1Q99536 MIR1267-201ENST00000408723 78 ntBASIC1.15□□□□□ -2.23
VAT1Q99536 AC004965.1-201ENST00000413033 213 ntBASIC1.15□□□□□ -2.23
VAT1Q99536 RPL21P111-201ENST00000418453 477 ntBASIC1.15□□□□□ -2.23
VAT1Q99536 AC106883.1-201ENST00000418805 562 ntBASIC1.15□□□□□ -2.23
VAT1Q99536 AL023581.1-201ENST00000423500 455 ntTSL 2 BASIC1.15□□□□□ -2.23
VAT1Q99536 MS4A4E-203ENST00000425663 350 ntTSL 1 (best) BASIC1.15□□□□□ -2.23
VAT1Q99536 LINC01611-201ENST00000428896 477 ntTSL 5 BASIC1.15□□□□□ -2.23
VAT1Q99536 MTATP6P16-201ENST00000434543 526 ntBASIC1.15□□□□□ -2.23
VAT1Q99536 UBE2V1P8-201ENST00000437166 265 ntBASIC1.15□□□□□ -2.23
VAT1Q99536 AL512286.1-201ENST00000439244 400 ntBASIC1.15□□□□□ -2.23
VAT1Q99536 AC243964.1-201ENST00000441814 261 ntBASIC1.15□□□□□ -2.23
VAT1Q99536 RPS29P28-201ENST00000446439 141 ntBASIC1.15□□□□□ -2.23
VAT1Q99536 RPS26P55-201ENST00000471178 356 ntBASIC1.15□□□□□ -2.23
VAT1Q99536 AC005741.1-201ENST00000511094 432 ntBASIC1.15□□□□□ -2.23
VAT1Q99536 RNA5SP445-201ENST00000515889 115 ntBASIC1.15□□□□□ -2.23
VAT1Q99536 RNU6-1220P-201ENST00000517126 108 ntBASIC1.15□□□□□ -2.23
VAT1Q99536 AC022616.3-201ENST00000523940 148 ntBASIC1.15□□□□□ -2.23
VAT1Q99536 AC022596.1-201ENST00000582895 302 ntTSL 5 BASIC1.15□□□□□ -2.23
VAT1Q99536 AL121992.2-201ENST00000606262 256 ntBASIC1.15□□□□□ -2.23
VAT1Q99536 HTN1-205ENST00000610341 536 ntAPPRIS P1 TSL 1 (best) BASIC1.15□□□□□ -2.23
VAT1Q99536 AC027807.2-201ENST00000616099 408 ntBASIC1.15□□□□□ -2.23
VAT1Q99536 AC006927.3-201ENST00000638789 384 ntBASIC1.15□□□□□ -2.23
VAT1Q99536 AC245060.5-201ENST00000610778 3293 ntBASIC1.14□□□□□ -2.23
VAT1Q99536 AC007370.2-201ENST00000506899 2694 ntTSL 5 BASIC1.14□□□□□ -2.23
VAT1Q99536 KIAA1551-201ENST00000312561 6230 ntAPPRIS P1 TSL 1 (best) BASIC1.14□□□□□ -2.23
VAT1Q99536 MIR302D-201ENST00000362275 68 ntBASIC1.14□□□□□ -2.23
VAT1Q99536 RNU6-179P-201ENST00000363350 107 ntBASIC1.14□□□□□ -2.23
VAT1Q99536 SNORD1A-201ENST00000364968 72 ntBASIC1.14□□□□□ -2.23
VAT1Q99536 Y_RNA.576-201ENST00000384781 102 ntBASIC1.14□□□□□ -2.23
VAT1Q99536 RNU6-387P-201ENST00000411331 105 ntBASIC1.14□□□□□ -2.23
VAT1Q99536 MTCYBP39-201ENST00000437562 491 ntBASIC1.14□□□□□ -2.23
VAT1Q99536 MTND1P30-201ENST00000441241 901 ntBASIC1.14□□□□□ -2.23
VAT1Q99536 AL136987.2-201ENST00000457321 684 ntTSL 3 BASIC1.14□□□□□ -2.23
VAT1Q99536 RPL26P26-201ENST00000480251 434 ntBASIC1.14□□□□□ -2.23
VAT1Q99536 HMGN1P13-201ENST00000505795 138 ntBASIC1.14□□□□□ -2.23
VAT1Q99536 AC034244.1-201ENST00000507687 207 ntBASIC1.14□□□□□ -2.23
VAT1Q99536 AC097467.3-213ENST00000508191 726 ntTSL 3 BASIC1.14□□□□□ -2.23
VAT1Q99536 AC026765.1-201ENST00000547876 435 ntTSL 3 BASIC1.14□□□□□ -2.23
VAT1Q99536 MTND1P8-201ENST00000571424 950 ntBASIC1.14□□□□□ -2.23
VAT1Q99536 AC008752.3-201ENST00000588113 712 ntBASIC1.14□□□□□ -2.23
VAT1Q99536 AL451064.1-201ENST00000607718 471 ntBASIC1.14□□□□□ -2.23
VAT1Q99536 AL391834.2-201ENST00000609982 546 ntBASIC1.14□□□□□ -2.23
VAT1Q99536 MIR6078-201ENST00000611069 100 ntBASIC1.14□□□□□ -2.23
VAT1Q99536 PLD1-217ENST00000627725 174 ntTSL 5 BASIC1.14□□□□□ -2.23
VAT1Q99536 SNORD98-201ENST00000636377 67 ntBASIC1.14□□□□□ -2.23
VAT1Q99536 CDK1-209ENST00000614696 1884 ntTSL 5 BASIC1.14□□□□□ -2.23
VAT1Q99536 AL391987.6-201ENST00000305671 199 ntBASIC1.13□□□□□ -2.23
VAT1Q99536 ZBTB8OS-201ENST00000341885 312 ntTSL 1 (best) BASIC1.13□□□□□ -2.23
VAT1Q99536 Y_RNA.140-201ENST00000363474 103 ntBASIC1.13□□□□□ -2.23
VAT1Q99536 RNU6-142P-201ENST00000384019 107 ntBASIC1.13□□□□□ -2.23
VAT1Q99536 MIR1285-1-201ENST00000408593 84 ntBASIC1.13□□□□□ -2.23
VAT1Q99536 SNRPG-202ENST00000413456 398 ntTSL 3 BASIC1.13□□□□□ -2.23
VAT1Q99536 AC009158.1-206ENST00000417476 454 ntTSL 3 BASIC1.13□□□□□ -2.23
VAT1Q99536 AL137856.1-202ENST00000418238 422 ntTSL 3 BASIC1.13□□□□□ -2.23
VAT1Q99536 C8orf59P1-201ENST00000429930 303 ntBASIC1.13□□□□□ -2.23
VAT1Q99536 JTBP1-201ENST00000441314 247 ntBASIC1.13□□□□□ -2.23
VAT1Q99536 SNRPEP8-201ENST00000442866 260 ntBASIC1.13□□□□□ -2.23
VAT1Q99536 AC092802.2-202ENST00000444665 371 ntTSL 5 BASIC1.13□□□□□ -2.23
VAT1Q99536 RPS27AP8-201ENST00000452665 445 ntBASIC1.13□□□□□ -2.23
VAT1Q99536 NMTRQ-TTG12-1-201ENST00000467595 72 ntBASIC1.13□□□□□ -2.23
VAT1Q99536 AC074344.1-201ENST00000512823 224 ntBASIC1.13□□□□□ -2.23
VAT1Q99536 AC124854.1-202ENST00000513779 339 ntTSL 3 BASIC1.13□□□□□ -2.23
VAT1Q99536 AC010420.1-201ENST00000515077 509 ntTSL 3 BASIC1.13□□□□□ -2.23
VAT1Q99536 AC005668.1-201ENST00000571142 476 ntBASIC1.13□□□□□ -2.23
VAT1Q99536 AC110760.3-201ENST00000598794 467 ntBASIC1.13□□□□□ -2.23
VAT1Q99536 AC007671.2-201ENST00000637344 619 ntBASIC1.13□□□□□ -2.23
VAT1Q99536 AC106754.1-201ENST00000562632 1513 ntBASIC1.12□□□□□ -2.23
VAT1Q99536 SNORD115-7-201ENST00000365306 82 ntBASIC1.12□□□□□ -2.23
VAT1Q99536 C6orf62-201ENST00000378102 741 ntTSL 5 BASIC1.12□□□□□ -2.23
VAT1Q99536 RNU6-45P-201ENST00000384471 107 ntBASIC1.12□□□□□ -2.23
VAT1Q99536 RNU6-939P-201ENST00000384634 107 ntBASIC1.12□□□□□ -2.23
VAT1Q99536 RPL23AP32-201ENST00000395315 459 ntBASIC1.12□□□□□ -2.23
VAT1Q99536 RNU6-1245P-201ENST00000411130 106 ntBASIC1.12□□□□□ -2.23
VAT1Q99536 MTCO3P41-201ENST00000414801 328 ntBASIC1.12□□□□□ -2.23
VAT1Q99536 AC098592.1-201ENST00000419352 333 ntBASIC1.12□□□□□ -2.23
VAT1Q99536 AL354692.1-201ENST00000423044 315 ntBASIC1.12□□□□□ -2.23
VAT1Q99536 AC139712.2-201ENST00000424302 339 ntBASIC1.12□□□□□ -2.23
VAT1Q99536 MYCBP2-AS2-201ENST00000428716 428 ntTSL 5 BASIC1.12□□□□□ -2.23
VAT1Q99536 PCDH9-AS3-201ENST00000434073 479 ntTSL 2 BASIC1.12□□□□□ -2.23
Retrieved 100 of 98,524 protein–RNA pairs in 100.1 ms