Protein–RNA interactions for Protein: Q96RY7

IFT140, Intraflagellar transport protein 140 homolog, humanhuman

Predictions only

Length 1,462 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFT140Q96RY7 AC003991.1-202ENST00000447058 777 ntTSL 3 BASIC0.25□□□□□ -2.37
IFT140Q96RY7 LINC01201-202ENST00000451431 401 ntTSL 3 BASIC0.25□□□□□ -2.37
IFT140Q96RY7 AL008723.1-201ENST00000452181 590 ntTSL 5 BASIC0.25□□□□□ -2.37
IFT140Q96RY7 RNU1-131P-201ENST00000458943 161 ntBASIC0.25□□□□□ -2.37
IFT140Q96RY7 RNU6-333P-201ENST00000459117 107 ntBASIC0.25□□□□□ -2.37
IFT140Q96RY7 RNU7-140P-201ENST00000459546 60 ntBASIC0.25□□□□□ -2.37
IFT140Q96RY7 LRRC70-203ENST00000491184 703 ntTSL 3 BASIC0.25□□□□□ -2.37
IFT140Q96RY7 AC091976.1-202ENST00000509211 630 ntTSL 3 BASIC0.25□□□□□ -2.37
IFT140Q96RY7 RNA5SP134-201ENST00000516492 96 ntBASIC0.25□□□□□ -2.37
IFT140Q96RY7 RN7SKP258-201ENST00000517151 304 ntBASIC0.25□□□□□ -2.37
IFT140Q96RY7 AL121579.1-201ENST00000555129 305 ntBASIC0.25□□□□□ -2.37
IFT140Q96RY7 AC026470.3-201ENST00000563994 438 ntTSL 3 BASIC0.25□□□□□ -2.37
IFT140Q96RY7 AC063943.3-201ENST00000615562 356 ntBASIC0.25□□□□□ -2.37
IFT140Q96RY7 MIR6516-201ENST00000630554 81 ntBASIC0.25□□□□□ -2.37
IFT140Q96RY7 AC106858.1-201ENST00000637497 429 ntBASIC0.25□□□□□ -2.37
IFT140Q96RY7 MT-ATP6-201ENST00000361899 681 ntAPPRIS P1 BASIC0.24□□□□□ -2.37
IFT140Q96RY7 SNORD18A-201ENST00000363753 72 ntBASIC0.24□□□□□ -2.37
IFT140Q96RY7 MIR942-201ENST00000401111 86 ntBASIC0.24□□□□□ -2.37
IFT140Q96RY7 ZNF736P10Y-201ENST00000403990 1110 ntBASIC0.24□□□□□ -2.37
IFT140Q96RY7 UBE2V1P10-201ENST00000414685 269 ntBASIC0.24□□□□□ -2.37
IFT140Q96RY7 AL583803.1-201ENST00000454262 334 ntTSL 3 BASIC0.24□□□□□ -2.37
IFT140Q96RY7 MED28P2-201ENST00000475771 317 ntBASIC0.24□□□□□ -2.37
IFT140Q96RY7 AP003181.1-201ENST00000528811 445 ntTSL 3 BASIC0.24□□□□□ -2.37
IFT140Q96RY7 AC113192.4-201ENST00000534666 547 ntTSL 4 BASIC0.24□□□□□ -2.37
IFT140Q96RY7 AC090680.2-201ENST00000550279 742 ntTSL 3 BASIC0.24□□□□□ -2.37
IFT140Q96RY7 AC018659.1-201ENST00000551083 169 ntBASIC0.24□□□□□ -2.37
IFT140Q96RY7 AC005774.1-201ENST00000565247 567 ntTSL 4 BASIC0.24□□□□□ -2.37
IFT140Q96RY7 AC091489.2-201ENST00000566263 604 ntBASIC0.24□□□□□ -2.37
IFT140Q96RY7 RNU6ATAC35P-201ENST00000609276 444 ntBASIC0.24□□□□□ -2.37
IFT140Q96RY7 uc_338.22-201ENST00000622722 187 ntBASIC0.24□□□□□ -2.37
IFT140Q96RY7 AL391994.1-201ENST00000254724 282 ntBASIC0.23□□□□□ -2.37
IFT140Q96RY7 snoU2_19.1-201ENST00000362361 80 ntBASIC0.23□□□□□ -2.37
IFT140Q96RY7 Y_RNA.25-201ENST00000362528 102 ntBASIC0.23□□□□□ -2.37
IFT140Q96RY7 Y_RNA.170-201ENST00000363746 110 ntBASIC0.23□□□□□ -2.37
IFT140Q96RY7 Y_RNA.303-201ENST00000364998 94 ntBASIC0.23□□□□□ -2.37
IFT140Q96RY7 SNORA4.3-201ENST00000365564 137 ntBASIC0.23□□□□□ -2.37
IFT140Q96RY7 RNU6-1207P-201ENST00000384343 107 ntBASIC0.23□□□□□ -2.37
IFT140Q96RY7 AF130351.1-202ENST00000400562 808 ntAPPRIS P5 TSL 3 BASIC0.23□□□□□ -2.37
IFT140Q96RY7 AL353752.1-201ENST00000454946 260 ntBASIC0.23□□□□□ -2.37
IFT140Q96RY7 LINC01473-203ENST00000456653 1079 ntTSL 3 BASIC0.23□□□□□ -2.37
IFT140Q96RY7 RPS26P45-201ENST00000471748 340 ntBASIC0.23□□□□□ -2.37
IFT140Q96RY7 AC104417.1-201ENST00000523974 751 ntBASIC0.23□□□□□ -2.37
IFT140Q96RY7 AP001893.2-201ENST00000526949 202 ntBASIC0.23□□□□□ -2.37
IFT140Q96RY7 MIR5093-201ENST00000583199 100 ntBASIC0.23□□□□□ -2.37
IFT140Q96RY7 RNU6-87P-201ENST00000607561 108 ntBASIC0.23□□□□□ -2.37
IFT140Q96RY7 AL158163.2-201ENST00000619110 700 ntBASIC0.23□□□□□ -2.37
IFT140Q96RY7 AC099654.9-201ENST00000637055 678 ntBASIC0.23□□□□□ -2.37
IFT140Q96RY7 MIR3529-201ENST00000637713 78 ntBASIC0.23□□□□□ -2.37
IFT140Q96RY7 RNA5SP259-201ENST00000365541 109 ntBASIC0.22□□□□□ -2.37
IFT140Q96RY7 RNU6-348P-201ENST00000384386 107 ntBASIC0.22□□□□□ -2.37
IFT140Q96RY7 RNU6-700P-201ENST00000391043 107 ntBASIC0.22□□□□□ -2.37
IFT140Q96RY7 AL357139.1-201ENST00000407792 426 ntBASIC0.22□□□□□ -2.37
IFT140Q96RY7 NLGN1-AS1-201ENST00000423873 815 ntTSL 3 BASIC0.22□□□□□ -2.37
IFT140Q96RY7 AC093019.2-201ENST00000432294 384 ntTSL 3 BASIC0.22□□□□□ -2.37
IFT140Q96RY7 MTCYBP15-201ENST00000433123 1127 ntBASIC0.22□□□□□ -2.37
IFT140Q96RY7 AL359771.1-201ENST00000441809 379 ntTSL 5 BASIC0.22□□□□□ -2.37
IFT140Q96RY7 AC002350.1-201ENST00000490759 375 ntBASIC0.22□□□□□ -2.37
IFT140Q96RY7 AC093297.2-205ENST00000508123 572 ntTSL 3 BASIC0.22□□□□□ -2.37
IFT140Q96RY7 LINC02201-201ENST00000508992 468 ntTSL 2 BASIC0.22□□□□□ -2.37
IFT140Q96RY7 AC079140.3-201ENST00000511111 550 ntBASIC0.22□□□□□ -2.37
IFT140Q96RY7 SNORA31.4-201ENST00000516049 129 ntBASIC0.22□□□□□ -2.37
IFT140Q96RY7 RNU6-165P-201ENST00000517170 99 ntBASIC0.22□□□□□ -2.37
IFT140Q96RY7 RNU6-1261P-201ENST00000517194 104 ntBASIC0.22□□□□□ -2.37
IFT140Q96RY7 AC008662.2-201ENST00000522426 389 ntTSL 5 BASIC0.22□□□□□ -2.37
IFT140Q96RY7 AC136618.2-201ENST00000575091 400 ntBASIC0.22□□□□□ -2.37
IFT140Q96RY7 BNIP3P30-201ENST00000601184 574 ntBASIC0.22□□□□□ -2.37
IFT140Q96RY7 AC078795.2-201ENST00000602835 1252 ntBASIC0.22□□□□□ -2.37
IFT140Q96RY7 AC068506.1-202ENST00000613388 545 ntTSL 3 BASIC0.22□□□□□ -2.37
IFT140Q96RY7 ANKRD36BP1-202ENST00000604892 1417 ntBASIC0.22□□□□□ -2.37
IFT140Q96RY7 RNU4-79P-201ENST00000362764 141 ntBASIC0.22□□□□□ -2.37
IFT140Q96RY7 RNU6-843P-201ENST00000384454 104 ntBASIC0.22□□□□□ -2.37
IFT140Q96RY7 RAC1P6-201ENST00000423911 575 ntBASIC0.22□□□□□ -2.37
IFT140Q96RY7 PLCE1-AS2-203ENST00000433038 396 ntTSL 2 BASIC0.22□□□□□ -2.37
IFT140Q96RY7 snoU13.30-201ENST00000458951 104 ntBASIC0.22□□□□□ -2.37
IFT140Q96RY7 AC074124.1-201ENST00000502368 375 ntTSL 3 BASIC0.22□□□□□ -2.37
IFT140Q96RY7 AC011377.1-201ENST00000517708 275 ntTSL 3 BASIC0.22□□□□□ -2.37
IFT140Q96RY7 SUMO2P18-201ENST00000518873 252 ntBASIC0.22□□□□□ -2.37
IFT140Q96RY7 IL7-206ENST00000520269 456 ntTSL 3 BASIC0.22□□□□□ -2.37
IFT140Q96RY7 AP000756.1-201ENST00000532606 679 ntTSL 2 BASIC0.22□□□□□ -2.37
IFT140Q96RY7 MIR4768-201ENST00000585270 74 ntBASIC0.22□□□□□ -2.37
IFT140Q96RY7 Z83818.1-201ENST00000603584 150 ntBASIC0.22□□□□□ -2.37
IFT140Q96RY7 C1orf141-205ENST00000475209 2079 ntAPPRIS ALT2 TSL 5 BASIC0.21□□□□□ -2.38
IFT140Q96RY7 RNU6-353P-201ENST00000364266 108 ntBASIC0.21□□□□□ -2.38
IFT140Q96RY7 SNORD12-201ENST00000391002 90 ntBASIC0.21□□□□□ -2.38
IFT140Q96RY7 RSL24D1P8-201ENST00000434442 492 ntBASIC0.21□□□□□ -2.38
IFT140Q96RY7 AC015983.2-201ENST00000446053 472 ntTSL 3 BASIC0.21□□□□□ -2.38
IFT140Q96RY7 AC114981.1-201ENST00000503897 678 ntBASIC0.21□□□□□ -2.38
IFT140Q96RY7 SNORA31.2-201ENST00000516019 134 ntBASIC0.21□□□□□ -2.38
IFT140Q96RY7 RNU6-143P-201ENST00000516942 93 ntBASIC0.21□□□□□ -2.38
IFT140Q96RY7 AC025871.1-201ENST00000523935 443 ntTSL 2 BASIC0.21□□□□□ -2.38
IFT140Q96RY7 AP001189.2-201ENST00000527320 189 ntBASIC0.21□□□□□ -2.38
IFT140Q96RY7 MIR4305-201ENST00000583252 102 ntBASIC0.21□□□□□ -2.38
IFT140Q96RY7 AC022022.2-201ENST00000602989 360 ntBASIC0.21□□□□□ -2.38
IFT140Q96RY7 AC069114.2-201ENST00000604699 304 ntBASIC0.21□□□□□ -2.38
IFT140Q96RY7 AL353765.1-201ENST00000605514 183 ntBASIC0.21□□□□□ -2.38
IFT140Q96RY7 AL451064.1-201ENST00000607718 471 ntBASIC0.21□□□□□ -2.38
IFT140Q96RY7 RNU6-945P-201ENST00000383947 107 ntBASIC0.2□□□□□ -2.38
IFT140Q96RY7 AL590399.1-203ENST00000412631 256 ntTSL 5 BASIC0.2□□□□□ -2.38
IFT140Q96RY7 AL512658.1-201ENST00000449072 533 ntTSL 3 BASIC0.2□□□□□ -2.38
IFT140Q96RY7 AL590422.1-201ENST00000451829 364 ntTSL 3 BASIC0.2□□□□□ -2.38
Retrieved 100 of 98,524 protein–RNA pairs in 175.3 ms