Protein–RNA interactions for Protein: Q96JH7

VCPIP1, Deubiquitinating protein VCIP135, humanhuman

Predictions only

Length 1,222 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCPIP1Q96JH7 AC011816.1-201ENST00000441346 546 ntBASIC3.05□□□□□ -1.92
VCPIP1Q96JH7 ITCH-AS1-201ENST00000454205 299 ntTSL 5 BASIC3.05□□□□□ -1.92
VCPIP1Q96JH7 AC010099.1-201ENST00000455434 375 ntBASIC3.05□□□□□ -1.92
VCPIP1Q96JH7 AC105758.1-201ENST00000506038 399 ntBASIC3.05□□□□□ -1.92
VCPIP1Q96JH7 AC009812.2-201ENST00000517657 457 ntBASIC3.05□□□□□ -1.92
VCPIP1Q96JH7 AC090138.1-201ENST00000524493 578 ntTSL 4 BASIC3.05□□□□□ -1.92
VCPIP1Q96JH7 AC022690.2-201ENST00000525673 589 ntTSL 3 BASIC3.05□□□□□ -1.92
VCPIP1Q96JH7 AP000867.2-201ENST00000532468 320 ntBASIC3.05□□□□□ -1.92
VCPIP1Q96JH7 MYL12BP1-201ENST00000569826 507 ntBASIC3.05□□□□□ -1.92
VCPIP1Q96JH7 LRRC37A5P-203ENST00000580181 585 ntBASIC3.05□□□□□ -1.92
VCPIP1Q96JH7 SNORD58B-201ENST00000607313 66 ntBASIC3.05□□□□□ -1.92
VCPIP1Q96JH7 NPPA-AS1_3.1-201ENST00000617059 108 ntBASIC3.05□□□□□ -1.92
VCPIP1Q96JH7 LINC01002-215ENST00000632203 314 ntTSL 5 BASIC3.05□□□□□ -1.92
VCPIP1Q96JH7 AL606534.2-204ENST00000635008 178 ntBASIC3.05□□□□□ -1.92
VCPIP1Q96JH7 LEKR1-212ENST00000640869 237 ntTSL 5 BASIC3.05□□□□□ -1.92
VCPIP1Q96JH7 OR4M1-202ENST00000641200 3493 ntAPPRIS P1 BASIC3.05□□□□□ -1.92
VCPIP1Q96JH7 FOXP2-211ENST00000408937 6443 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
VCPIP1Q96JH7 TFEC-202ENST00000320239 6605 ntAPPRIS P1 TSL 1 (best) BASIC3.05□□□□□ -1.92
VCPIP1Q96JH7 CHD9-203ENST00000447540 11509 ntTSL 5 BASIC3.05□□□□□ -1.92
VCPIP1Q96JH7 GCNT4-201ENST00000322348 5554 ntAPPRIS P1 BASIC3.04□□□□□ -1.92
VCPIP1Q96JH7 ATF2-204ENST00000409437 3697 ntTSL 5 BASIC3.04□□□□□ -1.92
VCPIP1Q96JH7 ZNF72P-201ENST00000425869 1908 ntBASIC3.04□□□□□ -1.92
VCPIP1Q96JH7 SNORA63.7-201ENST00000365579 123 ntBASIC3.04□□□□□ -1.92
VCPIP1Q96JH7 OR51A4-201ENST00000380373 1002 ntAPPRIS P1 BASIC3.04□□□□□ -1.92
VCPIP1Q96JH7 Y_RNA.512-201ENST00000384518 102 ntBASIC3.04□□□□□ -1.92
VCPIP1Q96JH7 MT-TR-201ENST00000387439 65 ntBASIC3.04□□□□□ -1.92
VCPIP1Q96JH7 RNU2-3P-201ENST00000410144 191 ntBASIC3.04□□□□□ -1.92
VCPIP1Q96JH7 RNU6-1025P-201ENST00000410629 104 ntBASIC3.04□□□□□ -1.92
VCPIP1Q96JH7 LINC01402-201ENST00000422226 279 ntTSL 3 BASIC3.04□□□□□ -1.92
VCPIP1Q96JH7 MYL8P-204ENST00000431574 518 ntBASIC3.04□□□□□ -1.92
VCPIP1Q96JH7 AL133396.1-201ENST00000432048 687 ntBASIC3.04□□□□□ -1.92
VCPIP1Q96JH7 AL353997.1-201ENST00000432936 108 ntBASIC3.04□□□□□ -1.92
VCPIP1Q96JH7 AL031274.1-201ENST00000450334 232 ntBASIC3.04□□□□□ -1.92
VCPIP1Q96JH7 AL441989.1-201ENST00000454204 382 ntTSL 3 BASIC3.04□□□□□ -1.92
VCPIP1Q96JH7 snoU13.28-201ENST00000459235 104 ntBASIC3.04□□□□□ -1.92
VCPIP1Q96JH7 RPS26P21-201ENST00000475397 348 ntBASIC3.04□□□□□ -1.92
VCPIP1Q96JH7 RPS29P20-201ENST00000489592 171 ntBASIC3.04□□□□□ -1.92
VCPIP1Q96JH7 AC008716.1-201ENST00000511084 513 ntBASIC3.04□□□□□ -1.92
VCPIP1Q96JH7 RNA5SP385-201ENST00000515947 110 ntBASIC3.04□□□□□ -1.92
VCPIP1Q96JH7 AC012413.1-201ENST00000521294 519 ntTSL 2 BASIC3.04□□□□□ -1.92
VCPIP1Q96JH7 AC025755.1-201ENST00000521306 278 ntBASIC3.04□□□□□ -1.92
VCPIP1Q96JH7 AL133279.1-202ENST00000556789 456 ntTSL 5 BASIC3.04□□□□□ -1.92
VCPIP1Q96JH7 SUB1P3-201ENST00000564581 315 ntBASIC3.04□□□□□ -1.92
VCPIP1Q96JH7 MIR1273C-201ENST00000578669 77 ntBASIC3.04□□□□□ -1.92
VCPIP1Q96JH7 AC007948.1-201ENST00000581632 242 ntTSL 5 BASIC3.04□□□□□ -1.92
VCPIP1Q96JH7 MIR4273-201ENST00000582824 84 ntBASIC3.04□□□□□ -1.92
VCPIP1Q96JH7 RPL23AP78-201ENST00000599928 470 ntBASIC3.04□□□□□ -1.92
VCPIP1Q96JH7 AL359962.2-201ENST00000610044 303 ntTSL 5 BASIC3.04□□□□□ -1.92
VCPIP1Q96JH7 AC244517.5-202ENST00000623741 500 ntTSL 3 BASIC3.04□□□□□ -1.92
VCPIP1Q96JH7 AC068544.1-201ENST00000635064 248 ntTSL 5 BASIC3.04□□□□□ -1.92
VCPIP1Q96JH7 ROCK2-203ENST00000401753 4017 ntTSL 1 (best) BASIC3.04□□□□□ -1.92
VCPIP1Q96JH7 C6orf10-202ENST00000375015 2173 ntAPPRIS ALT2 TSL 5 BASIC3.04□□□□□ -1.92
VCPIP1Q96JH7 PRKACB-217ENST00000610457 4206 ntTSL 2 BASIC3.04□□□□□ -1.92
VCPIP1Q96JH7 PRKACB-218ENST00000610703 4240 ntTSL 2 BASIC3.04□□□□□ -1.92
VCPIP1Q96JH7 HSPA4L-202ENST00000505726 2639 ntTSL 2 BASIC3.04□□□□□ -1.92
VCPIP1Q96JH7 AL359693.1-201ENST00000614959 2407 ntBASIC3.03□□□□□ -1.92
VCPIP1Q96JH7 Y_RNA.33-201ENST00000362591 102 ntBASIC3.03□□□□□ -1.92
VCPIP1Q96JH7 RNU6-884P-201ENST00000363889 107 ntBASIC3.03□□□□□ -1.92
VCPIP1Q96JH7 MIR301A-201ENST00000385261 86 ntBASIC3.03□□□□□ -1.92
VCPIP1Q96JH7 RNU6-1109P-201ENST00000391187 107 ntBASIC3.03□□□□□ -1.92
VCPIP1Q96JH7 AL353621.1-201ENST00000418219 243 ntBASIC3.03□□□□□ -1.92
VCPIP1Q96JH7 AL356010.2-201ENST00000422844 197 ntTSL 3 BASIC3.03□□□□□ -1.92
VCPIP1Q96JH7 AC010655.3-201ENST00000478818 450 ntBASIC3.03□□□□□ -1.92
VCPIP1Q96JH7 AC011005.2-201ENST00000487324 359 ntBASIC3.03□□□□□ -1.92
VCPIP1Q96JH7 AC114801.2-201ENST00000503825 781 ntBASIC3.03□□□□□ -1.92
VCPIP1Q96JH7 RNU1-86P-201ENST00000516108 154 ntBASIC3.03□□□□□ -1.92
VCPIP1Q96JH7 RNU1-107P-201ENST00000516617 154 ntBASIC3.03□□□□□ -1.92
VCPIP1Q96JH7 AC090568.2-205ENST00000518631 576 ntTSL 4 BASIC3.03□□□□□ -1.92
VCPIP1Q96JH7 AC092070.3-201ENST00000596041 337 ntTSL 3 BASIC3.03□□□□□ -1.92
VCPIP1Q96JH7 MTND4LP5-201ENST00000605152 292 ntBASIC3.03□□□□□ -1.92
VCPIP1Q96JH7 AC123912.5-201ENST00000605470 343 ntBASIC3.03□□□□□ -1.92
VCPIP1Q96JH7 AC100812.1-201ENST00000607622 580 ntBASIC3.03□□□□□ -1.92
VCPIP1Q96JH7 U2.21-201ENST00000637295 81 ntBASIC3.03□□□□□ -1.92
VCPIP1Q96JH7 GYPB-216ENST00000638448 363 ntAPPRIS P1 TSL 1 (best) BASIC3.03□□□□□ -1.92
VCPIP1Q96JH7 PIK3C2G-206ENST00000538779 4963 ntTSL 5 BASIC3.03□□□□□ -1.92
VCPIP1Q96JH7 ADGRG7-202ENST00000475887 2035 ntTSL 2 BASIC3.03□□□□□ -1.92
VCPIP1Q96JH7 STAU2-201ENST00000355780 4061 ntTSL 1 (best) BASIC3.03□□□□□ -1.93
VCPIP1Q96JH7 DDX6-206ENST00000534980 4538 ntAPPRIS P1 TSL 1 (best) BASIC3.02□□□□□ -1.93
VCPIP1Q96JH7 ZMYM1-210ENST00000611874 4466 ntAPPRIS P1 TSL 2 BASIC3.02□□□□□ -1.93
VCPIP1Q96JH7 FAM35BP-202ENST00000497389 3337 ntBASIC3.02□□□□□ -1.93
VCPIP1Q96JH7 AC108206.1-201ENST00000570186 4159 ntBASIC3.02□□□□□ -1.93
VCPIP1Q96JH7 RPL9P7-201ENST00000330965 580 ntBASIC3.02□□□□□ -1.93
VCPIP1Q96JH7 TRAJ59-201ENST00000390480 54 ntAPPRIS P1 BASIC3.02□□□□□ -1.93
VCPIP1Q96JH7 SNORD88.1-201ENST00000408684 91 ntBASIC3.02□□□□□ -1.93
VCPIP1Q96JH7 RN7SKP123-201ENST00000410732 291 ntBASIC3.02□□□□□ -1.93
VCPIP1Q96JH7 RNU6-325P-201ENST00000411132 105 ntBASIC3.02□□□□□ -1.93
VCPIP1Q96JH7 AL356277.2-201ENST00000421318 441 ntTSL 2 BASIC3.02□□□□□ -1.93
VCPIP1Q96JH7 AC073325.1-201ENST00000443714 542 ntTSL 4 BASIC3.02□□□□□ -1.93
VCPIP1Q96JH7 SPAG11B-206ENST00000458665 444 ntTSL 5 BASIC3.02□□□□□ -1.93
VCPIP1Q96JH7 RPL17P19-201ENST00000489069 552 ntBASIC3.02□□□□□ -1.93
VCPIP1Q96JH7 AC022447.4-201ENST00000504053 364 ntBASIC3.02□□□□□ -1.93
VCPIP1Q96JH7 RNU6-475P-201ENST00000516073 104 ntBASIC3.02□□□□□ -1.93
VCPIP1Q96JH7 AC068880.3-201ENST00000519185 179 ntTSL 5 BASIC3.02□□□□□ -1.93
VCPIP1Q96JH7 AP001189.6-201ENST00000528781 831 ntTSL 1 (best) BASIC3.02□□□□□ -1.93
VCPIP1Q96JH7 HMGB1P14-201ENST00000557424 591 ntBASIC3.02□□□□□ -1.93
VCPIP1Q96JH7 LINC01570-201ENST00000561572 434 ntTSL 3 BASIC3.02□□□□□ -1.93
VCPIP1Q96JH7 AC135178.3-204ENST00000585181 451 ntTSL 2 BASIC3.02□□□□□ -1.93
VCPIP1Q96JH7 MIR3976-201ENST00000606807 139 ntBASIC3.02□□□□□ -1.93
VCPIP1Q96JH7 AL442067.1-201ENST00000613261 223 ntBASIC3.02□□□□□ -1.93
VCPIP1Q96JH7 U2.1-201ENST00000618978 145 ntBASIC3.02□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 215 ms