Protein–RNA interactions for Protein: Q96GC9

VMP1, Vacuole membrane protein 1, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1Q96GC9 HSPE1P4-201ENST00000550617 308 ntBASIC2.08□□□□□ -2.08
VMP1Q96GC9 AGGF1P4-201ENST00000568249 801 ntBASIC2.08□□□□□ -2.08
VMP1Q96GC9 AC008162.2-201ENST00000613352 291 ntAPPRIS P1 TSL 3 BASIC2.08□□□□□ -2.08
VMP1Q96GC9 GS1-279B7.1-204ENST00000641809 378 ntBASIC2.08□□□□□ -2.08
VMP1Q96GC9 ATP11C-202ENST00000361648 6010 ntAPPRIS ALT2 TSL 1 (best) BASIC2.07□□□□□ -2.08
VMP1Q96GC9 U8.2-201ENST00000363156 134 ntBASIC2.07□□□□□ -2.08
VMP1Q96GC9 RNU6-23P-201ENST00000363283 107 ntBASIC2.07□□□□□ -2.08
VMP1Q96GC9 RNA5SP138-201ENST00000365098 114 ntBASIC2.07□□□□□ -2.08
VMP1Q96GC9 RNU6-827P-201ENST00000365553 106 ntBASIC2.07□□□□□ -2.08
VMP1Q96GC9 RNU6-517P-201ENST00000384362 110 ntBASIC2.07□□□□□ -2.08
VMP1Q96GC9 RNU6-903P-201ENST00000391270 109 ntBASIC2.07□□□□□ -2.08
VMP1Q96GC9 RN7SKP223-201ENST00000410582 62 ntBASIC2.07□□□□□ -2.08
VMP1Q96GC9 AC002456.1-203ENST00000412669 449 ntTSL 3 BASIC2.07□□□□□ -2.08
VMP1Q96GC9 DPH3P2-201ENST00000422618 250 ntBASIC2.07□□□□□ -2.08
VMP1Q96GC9 AL139415.2-201ENST00000431968 163 ntBASIC2.07□□□□□ -2.08
VMP1Q96GC9 AC023590.1-204ENST00000434023 431 ntTSL 5 BASIC2.07□□□□□ -2.08
VMP1Q96GC9 GHRL-208ENST00000439975 326 ntTSL 1 (best) BASIC2.07□□□□□ -2.08
VMP1Q96GC9 AL442638.1-201ENST00000443359 237 ntTSL 5 BASIC2.07□□□□□ -2.08
VMP1Q96GC9 HMGN2P18-201ENST00000450680 270 ntBASIC2.07□□□□□ -2.08
VMP1Q96GC9 AC098862.1-201ENST00000504991 413 ntBASIC2.07□□□□□ -2.08
VMP1Q96GC9 TMEM132D-AS1-202ENST00000510001 293 ntTSL 1 (best) BASIC2.07□□□□□ -2.08
VMP1Q96GC9 AC096711.1-201ENST00000510967 347 ntTSL 5 BASIC2.07□□□□□ -2.08
VMP1Q96GC9 Y_RNA.695-201ENST00000516715 107 ntBASIC2.07□□□□□ -2.08
VMP1Q96GC9 RNA5SP490-201ENST00000517141 136 ntBASIC2.07□□□□□ -2.08
VMP1Q96GC9 AC011611.2-201ENST00000549888 358 ntTSL 3 BASIC2.07□□□□□ -2.08
VMP1Q96GC9 AC103996.1-201ENST00000555468 102 ntBASIC2.07□□□□□ -2.08
VMP1Q96GC9 AC027807.1-201ENST00000559921 996 ntBASIC2.07□□□□□ -2.08
VMP1Q96GC9 MIR4528-201ENST00000577763 90 ntBASIC2.07□□□□□ -2.08
VMP1Q96GC9 AL160394.1-201ENST00000624765 724 ntBASIC2.07□□□□□ -2.08
VMP1Q96GC9 MTND5P6-201ENST00000422338 1798 ntBASIC2.07□□□□□ -2.08
VMP1Q96GC9 OR5H15-201ENST00000383696 930 ntBASIC2.06□□□□□ -2.08
VMP1Q96GC9 RN7SKP61-201ENST00000410642 295 ntBASIC2.06□□□□□ -2.08
VMP1Q96GC9 AL358234.1-201ENST00000421132 273 ntTSL 5 BASIC2.06□□□□□ -2.08
VMP1Q96GC9 MTCO2P34-201ENST00000421994 607 ntBASIC2.06□□□□□ -2.08
VMP1Q96GC9 USP9YP29-201ENST00000445112 563 ntBASIC2.06□□□□□ -2.08
VMP1Q96GC9 AL035666.1-201ENST00000446195 348 ntBASIC2.06□□□□□ -2.08
VMP1Q96GC9 RNU7-167P-201ENST00000459160 62 ntBASIC2.06□□□□□ -2.08
VMP1Q96GC9 AC087884.1-201ENST00000469738 328 ntBASIC2.06□□□□□ -2.08
VMP1Q96GC9 RNA5SP200-201ENST00000516360 103 ntBASIC2.06□□□□□ -2.08
VMP1Q96GC9 RNA5SP364-201ENST00000516938 78 ntBASIC2.06□□□□□ -2.08
VMP1Q96GC9 AP003465.1-201ENST00000520575 382 ntTSL 2 BASIC2.06□□□□□ -2.08
VMP1Q96GC9 GNAI2P1-201ENST00000541815 315 ntBASIC2.06□□□□□ -2.08
VMP1Q96GC9 ANP32BP3-201ENST00000559213 706 ntBASIC2.06□□□□□ -2.08
VMP1Q96GC9 AC022254.1-201ENST00000567857 235 ntBASIC2.06□□□□□ -2.08
VMP1Q96GC9 MIR3923-201ENST00000579521 83 ntBASIC2.06□□□□□ -2.08
VMP1Q96GC9 AC008088.1-201ENST00000580993 280 ntBASIC2.06□□□□□ -2.08
VMP1Q96GC9 AC005304.3-201ENST00000581533 511 ntTSL 3 BASIC2.06□□□□□ -2.08
VMP1Q96GC9 MIR3945-201ENST00000581853 98 ntBASIC2.06□□□□□ -2.08
VMP1Q96GC9 LINC01900-203ENST00000585185 393 ntTSL 3 BASIC2.06□□□□□ -2.08
VMP1Q96GC9 AC110760.3-201ENST00000598794 467 ntBASIC2.06□□□□□ -2.08
VMP1Q96GC9 AC012493.3-201ENST00000604494 112 ntBASIC2.06□□□□□ -2.08
VMP1Q96GC9 U2.17-201ENST00000611454 95 ntBASIC2.06□□□□□ -2.08
VMP1Q96GC9 AC136475.10-201ENST00000620253 385 ntBASIC2.06□□□□□ -2.08
VMP1Q96GC9 AC009831.4-201ENST00000620744 325 ntBASIC2.06□□□□□ -2.08
VMP1Q96GC9 AC005609.4-201ENST00000625071 447 ntBASIC2.06□□□□□ -2.08
VMP1Q96GC9 TBL1XR1-208ENST00000430069 7948 ntAPPRIS P1 TSL 1 (best) BASIC2.05□□□□□ -2.08
VMP1Q96GC9 RNU6-552P-201ENST00000362869 119 ntBASIC2.05□□□□□ -2.08
VMP1Q96GC9 RNA5SP493-201ENST00000364115 91 ntBASIC2.05□□□□□ -2.08
VMP1Q96GC9 SNORD32A-201ENST00000364805 84 ntBASIC2.05□□□□□ -2.08
VMP1Q96GC9 RNU6-234P-201ENST00000365229 104 ntBASIC2.05□□□□□ -2.08
VMP1Q96GC9 RNU6-348P-201ENST00000384386 107 ntBASIC2.05□□□□□ -2.08
VMP1Q96GC9 MTCYBP2-201ENST00000407745 171 ntBASIC2.05□□□□□ -2.08
VMP1Q96GC9 PLCE1-AS2-203ENST00000433038 396 ntTSL 2 BASIC2.05□□□□□ -2.08
VMP1Q96GC9 SNAP23P1-201ENST00000433229 246 ntBASIC2.05□□□□□ -2.08
VMP1Q96GC9 FAR2P3-204ENST00000434661 444 ntTSL 2 BASIC2.05□□□□□ -2.08
VMP1Q96GC9 AC096638.1-201ENST00000444678 216 ntBASIC2.05□□□□□ -2.08
VMP1Q96GC9 SNORA31.16-201ENST00000516773 139 ntBASIC2.05□□□□□ -2.08
VMP1Q96GC9 LINC02461-201ENST00000553211 836 ntTSL 3 BASIC2.05□□□□□ -2.08
VMP1Q96GC9 HSBP1P1-201ENST00000555205 166 ntBASIC2.05□□□□□ -2.08
VMP1Q96GC9 AC109446.1-201ENST00000566172 220 ntBASIC2.05□□□□□ -2.08
VMP1Q96GC9 PWRN1-209ENST00000568019 359 ntTSL 3 BASIC2.05□□□□□ -2.08
VMP1Q96GC9 MTATP6P3-201ENST00000581686 676 ntBASIC2.05□□□□□ -2.08
VMP1Q96GC9 AC091965.1-202ENST00000607662 397 ntTSL 3 BASIC2.05□□□□□ -2.08
VMP1Q96GC9 AP001596.2-201ENST00000608410 312 ntBASIC2.05□□□□□ -2.08
VMP1Q96GC9 AC078883.4-201ENST00000623218 367 ntBASIC2.05□□□□□ -2.08
VMP1Q96GC9 ZBBX-205ENST00000455345 3185 ntAPPRIS ALT2 TSL 1 (best) BASIC2.04□□□□□ -2.08
VMP1Q96GC9 CBX3P1-201ENST00000325243 554 ntBASIC2.04□□□□□ -2.08
VMP1Q96GC9 AC092268.1-201ENST00000342691 405 ntBASIC2.04□□□□□ -2.08
VMP1Q96GC9 Y_RNA.159-201ENST00000363674 87 ntBASIC2.04□□□□□ -2.08
VMP1Q96GC9 SNORA48.3-201ENST00000391081 134 ntBASIC2.04□□□□□ -2.08
VMP1Q96GC9 SNORA11.4-201ENST00000408823 129 ntBASIC2.04□□□□□ -2.08
VMP1Q96GC9 AC009310.1-201ENST00000414414 451 ntBASIC2.04□□□□□ -2.08
VMP1Q96GC9 AC083900.1-201ENST00000421964 469 ntTSL 2 BASIC2.04□□□□□ -2.08
VMP1Q96GC9 LANCL1-AS1-203ENST00000433296 864 ntTSL 2 BASIC2.04□□□□□ -2.08
VMP1Q96GC9 RNU7-63P-201ENST00000459054 62 ntBASIC2.04□□□□□ -2.08
VMP1Q96GC9 AC025033.1-201ENST00000463883 194 ntBASIC2.04□□□□□ -2.08
VMP1Q96GC9 APOA2-205ENST00000468465 421 ntTSL 2 BASIC2.04□□□□□ -2.08
VMP1Q96GC9 AC004917.1-201ENST00000490856 575 ntTSL 4 BASIC2.04□□□□□ -2.08
VMP1Q96GC9 AC005741.1-201ENST00000511094 432 ntBASIC2.04□□□□□ -2.08
VMP1Q96GC9 ASPH-224ENST00000522603 842 ntTSL 1 (best) BASIC2.04□□□□□ -2.08
VMP1Q96GC9 MGST1-207ENST00000535309 1331 ntTSL 1 (best) BASIC2.04□□□□□ -2.08
VMP1Q96GC9 AC007834.2-201ENST00000536310 343 ntBASIC2.04□□□□□ -2.08
VMP1Q96GC9 AP001363.1-201ENST00000544108 264 ntTSL 3 BASIC2.04□□□□□ -2.08
VMP1Q96GC9 AL133279.1-202ENST00000556789 456 ntTSL 5 BASIC2.04□□□□□ -2.08
VMP1Q96GC9 DLGAP1-AS4-201ENST00000582054 757 ntTSL 5 BASIC2.04□□□□□ -2.08
VMP1Q96GC9 MIR5002-201ENST00000584713 97 ntBASIC2.04□□□□□ -2.08
VMP1Q96GC9 RMST_6.1-201ENST00000611980 203 ntBASIC2.04□□□□□ -2.08
VMP1Q96GC9 AL158063.1-201ENST00000615349 536 ntBASIC2.04□□□□□ -2.08
VMP1Q96GC9 AC008147.4-201ENST00000617570 1204 ntBASIC2.04□□□□□ -2.08
VMP1Q96GC9 RNU5A-6P-201ENST00000384136 116 ntBASIC2.03□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 178.4 ms