Protein–RNA interactions for Protein: Q96FI4

NEIL1, Endonuclease 8-like 1, humanhuman

Predicted RBP Predictions only

Length 390 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEIL1Q96FI4 Y_RNA.275-201ENST00000364726 110 ntBASIC3.31□□□□□ -1.88
NEIL1Q96FI4 SNORA36A-201ENST00000384221 132 ntBASIC3.31□□□□□ -1.88
NEIL1Q96FI4 Y_RNA.506-201ENST00000384494 102 ntBASIC3.31□□□□□ -1.88
NEIL1Q96FI4 Y_RNA.570-201ENST00000384750 101 ntBASIC3.31□□□□□ -1.88
NEIL1Q96FI4 HLFP1-201ENST00000402375 499 ntBASIC3.31□□□□□ -1.88
NEIL1Q96FI4 LINC01402-201ENST00000422226 279 ntTSL 3 BASIC3.31□□□□□ -1.88
NEIL1Q96FI4 ARF4P2-201ENST00000430209 526 ntBASIC3.31□□□□□ -1.88
NEIL1Q96FI4 AC117440.1-201ENST00000474107 571 ntBASIC3.31□□□□□ -1.88
NEIL1Q96FI4 RPS4XP22-201ENST00000480755 780 ntBASIC3.31□□□□□ -1.88
NEIL1Q96FI4 MRPL42P6-201ENST00000486397 371 ntBASIC3.31□□□□□ -1.88
NEIL1Q96FI4 RNA5SP179-201ENST00000517284 121 ntBASIC3.31□□□□□ -1.88
NEIL1Q96FI4 AC022559.1-201ENST00000520905 205 ntBASIC3.31□□□□□ -1.88
NEIL1Q96FI4 HSPE1P4-201ENST00000550617 308 ntBASIC3.31□□□□□ -1.88
NEIL1Q96FI4 GNRHR2P1-201ENST00000555315 631 ntBASIC3.31□□□□□ -1.88
NEIL1Q96FI4 AL451007.1-201ENST00000595491 289 ntBASIC3.31□□□□□ -1.88
NEIL1Q96FI4 AC091167.4-201ENST00000605079 184 ntBASIC3.31□□□□□ -1.88
NEIL1Q96FI4 AC011921.3-201ENST00000605540 361 ntBASIC3.31□□□□□ -1.88
NEIL1Q96FI4 AL591424.2-201ENST00000617023 128 ntBASIC3.31□□□□□ -1.88
NEIL1Q96FI4 TET2-204ENST00000413648 4973 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
NEIL1Q96FI4 ROCK1P1-203ENST00000608049 2457 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
NEIL1Q96FI4 LMBRD1-201ENST00000370570 2099 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
NEIL1Q96FI4 AC135776.4-201ENST00000624300 1904 ntBASIC3.31□□□□□ -1.88
NEIL1Q96FI4 SCOC-201ENST00000338517 1864 ntTSL 4 BASIC3.3□□□□□ -1.88
NEIL1Q96FI4 LIG4-201ENST00000356922 4096 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
NEIL1Q96FI4 TPTE2-204ENST00000400103 1652 ntTSL 5 BASIC3.3□□□□□ -1.88
NEIL1Q96FI4 MBNL1-220ENST00000493459 4205 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
NEIL1Q96FI4 C18orf54-202ENST00000382911 4056 ntTSL 5 BASIC3.3□□□□□ -1.88
NEIL1Q96FI4 DLEU2_6.3-201ENST00000340052 136 ntBASIC3.3□□□□□ -1.88
NEIL1Q96FI4 MIR423-201ENST00000362201 94 ntBASIC3.3□□□□□ -1.88
NEIL1Q96FI4 SNORA25.1-201ENST00000362326 128 ntBASIC3.3□□□□□ -1.88
NEIL1Q96FI4 RNU6-858P-201ENST00000362436 107 ntBASIC3.3□□□□□ -1.88
NEIL1Q96FI4 RNU1-105P-201ENST00000363470 161 ntBASIC3.3□□□□□ -1.88
NEIL1Q96FI4 RNU6-799P-201ENST00000363567 107 ntBASIC3.3□□□□□ -1.88
NEIL1Q96FI4 RNU6-137P-201ENST00000363680 108 ntBASIC3.3□□□□□ -1.88
NEIL1Q96FI4 RNU6-1027P-201ENST00000383998 107 ntBASIC3.3□□□□□ -1.88
NEIL1Q96FI4 RNU6-20P-201ENST00000384106 107 ntBASIC3.3□□□□□ -1.88
NEIL1Q96FI4 Y_RNA.446-201ENST00000384178 104 ntBASIC3.3□□□□□ -1.88
NEIL1Q96FI4 RNU6-1145P-201ENST00000384246 107 ntBASIC3.3□□□□□ -1.88
NEIL1Q96FI4 RNU6-1140P-201ENST00000410517 106 ntBASIC3.3□□□□□ -1.88
NEIL1Q96FI4 AL513008.1-201ENST00000412701 161 ntTSL 5 BASIC3.3□□□□□ -1.88
NEIL1Q96FI4 AL714022.1-201ENST00000439897 151 ntBASIC3.3□□□□□ -1.88
NEIL1Q96FI4 GPM6BP3-201ENST00000442797 145 ntBASIC3.3□□□□□ -1.88
NEIL1Q96FI4 AL139260.1-202ENST00000456813 441 ntTSL 3 BASIC3.3□□□□□ -1.88
NEIL1Q96FI4 MIR1302-2HG-201ENST00000469289 535 ntTSL 5 BASIC3.3□□□□□ -1.88
NEIL1Q96FI4 RPS27AP10-201ENST00000496103 208 ntBASIC3.3□□□□□ -1.88
NEIL1Q96FI4 RPL31P61-201ENST00000496160 376 ntBASIC3.3□□□□□ -1.88
NEIL1Q96FI4 PPP2R2B-IT1-201ENST00000505921 447 ntTSL 3 BASIC3.3□□□□□ -1.88
NEIL1Q96FI4 SNORA31.23-201ENST00000517219 133 ntBASIC3.3□□□□□ -1.88
NEIL1Q96FI4 AC106785.1-201ENST00000565935 262 ntBASIC3.3□□□□□ -1.88
NEIL1Q96FI4 MIR4282-201ENST00000583613 67 ntBASIC3.3□□□□□ -1.88
NEIL1Q96FI4 AC245748.3-201ENST00000588710 241 ntTSL 3 BASIC3.3□□□□□ -1.88
NEIL1Q96FI4 RPS4XP16-203ENST00000596904 698 ntTSL 5 BASIC3.3□□□□□ -1.88
NEIL1Q96FI4 DLEU2_6.2-201ENST00000620994 136 ntBASIC3.3□□□□□ -1.88
NEIL1Q96FI4 NRDE2-210ENST00000628832 132 ntTSL 5 BASIC3.3□□□□□ -1.88
NEIL1Q96FI4 AL773545.4-201ENST00000637262 310 ntBASIC3.3□□□□□ -1.88
NEIL1Q96FI4 AL513478.4-201ENST00000641636 310 ntBASIC3.3□□□□□ -1.88
NEIL1Q96FI4 SLITRK5-201ENST00000325089 21103 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
NEIL1Q96FI4 OFD1P6Y-202ENST00000451061 2724 ntBASIC3.3□□□□□ -1.88
NEIL1Q96FI4 CDH10-201ENST00000264463 3438 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
NEIL1Q96FI4 ADAM28-201ENST00000265769 7052 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
NEIL1Q96FI4 IPO8P1-201ENST00000455509 3109 ntBASIC3.29□□□□□ -1.88
NEIL1Q96FI4 MTX3-203ENST00000512560 4799 ntTSL 2 BASIC3.29□□□□□ -1.88
NEIL1Q96FI4 ZNF99-202ENST00000596209 7817 ntTSL 5 BASIC3.29□□□□□ -1.88
NEIL1Q96FI4 CKAP5-201ENST00000312055 6532 ntTSL 5 BASIC3.29□□□□□ -1.88
NEIL1Q96FI4 RNU6-1020P-201ENST00000363684 107 ntBASIC3.29□□□□□ -1.88
NEIL1Q96FI4 SNORD115-8-201ENST00000363856 82 ntBASIC3.29□□□□□ -1.88
NEIL1Q96FI4 RNA5SP399-201ENST00000364003 117 ntBASIC3.29□□□□□ -1.88
NEIL1Q96FI4 RNU6-1141P-201ENST00000364520 107 ntBASIC3.29□□□□□ -1.88
NEIL1Q96FI4 SNORD115-38-201ENST00000365037 82 ntBASIC3.29□□□□□ -1.88
NEIL1Q96FI4 Y_RNA.418-201ENST00000384029 102 ntBASIC3.29□□□□□ -1.88
NEIL1Q96FI4 U3.19-201ENST00000390893 196 ntBASIC3.29□□□□□ -1.88
NEIL1Q96FI4 Y_RNA.590-201ENST00000410140 107 ntBASIC3.29□□□□□ -1.88
NEIL1Q96FI4 RNU2-61P-201ENST00000411069 191 ntBASIC3.29□□□□□ -1.88
NEIL1Q96FI4 LINC01349-201ENST00000416343 497 ntTSL 3 BASIC3.29□□□□□ -1.88
NEIL1Q96FI4 LINC01701-201ENST00000419614 451 ntTSL 2 BASIC3.29□□□□□ -1.88
NEIL1Q96FI4 LINC02238-202ENST00000436262 320 ntTSL 3 BASIC3.29□□□□□ -1.88
NEIL1Q96FI4 TBCAP1-201ENST00000436520 327 ntBASIC3.29□□□□□ -1.88
NEIL1Q96FI4 RPS29P7-201ENST00000439662 171 ntBASIC3.29□□□□□ -1.88
NEIL1Q96FI4 AL392046.1-203ENST00000450106 651 ntTSL 2 BASIC3.29□□□□□ -1.88
NEIL1Q96FI4 snoU13.6-201ENST00000458785 104 ntBASIC3.29□□□□□ -1.88
NEIL1Q96FI4 RPS29P20-201ENST00000489592 171 ntBASIC3.29□□□□□ -1.88
NEIL1Q96FI4 AC091959.1-201ENST00000495857 238 ntBASIC3.29□□□□□ -1.88
NEIL1Q96FI4 AC016632.1-201ENST00000503994 196 ntBASIC3.29□□□□□ -1.88
NEIL1Q96FI4 Y_RNA.679-201ENST00000516416 91 ntBASIC3.29□□□□□ -1.88
NEIL1Q96FI4 AC009120.5-201ENST00000561669 475 ntTSL 5 BASIC3.29□□□□□ -1.88
NEIL1Q96FI4 HMGN2P15-201ENST00000585707 270 ntBASIC3.29□□□□□ -1.88
NEIL1Q96FI4 KLKP1-201ENST00000595979 403 ntBASIC3.29□□□□□ -1.88
NEIL1Q96FI4 AC008749.1-201ENST00000597650 306 ntBASIC3.29□□□□□ -1.88
NEIL1Q96FI4 KCNQ1OT1_5.1-201ENST00000621902 226 ntBASIC3.29□□□□□ -1.88
NEIL1Q96FI4 IGHVIII-44-202ENST00000636235 289 ntBASIC3.29□□□□□ -1.88
NEIL1Q96FI4 AC103988.1-201ENST00000566382 2177 ntBASIC3.29□□□□□ -1.88
NEIL1Q96FI4 TLR8-202ENST00000311912 3367 ntAPPRIS P4 TSL 1 (best) BASIC3.29□□□□□ -1.88
NEIL1Q96FI4 KNTC1-204ENST00000436959 2412 ntTSL 2 BASIC3.29□□□□□ -1.88
NEIL1Q96FI4 ZBBX-202ENST00000392764 2849 ntAPPRIS ALT2 TSL 1 (best) BASIC3.29□□□□□ -1.88
NEIL1Q96FI4 WDR72-201ENST00000360509 5887 ntAPPRIS P2 TSL 1 (best) BASIC3.28□□□□□ -1.88
NEIL1Q96FI4 LINC00670-201ENST00000313495 2953 ntTSL 2 BASIC3.28□□□□□ -1.88
NEIL1Q96FI4 PCDH15-208ENST00000395432 6901 ntTSL 5 BASIC3.28□□□□□ -1.88
NEIL1Q96FI4 ATM-203ENST00000452508 12954 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
NEIL1Q96FI4 DAZ4-206ENST00000449750 3271 ntTSL 5 BASIC3.28□□□□□ -1.88
NEIL1Q96FI4 AL021368.2-201ENST00000606125 5352 ntBASIC3.28□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 93.7 ms