Protein–RNA interactions for Protein: Q96DX8

RTP4, Receptor-transporting protein 4, humanhuman

Predictions only

Length 246 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTP4Q96DX8 TMEM232-201ENST00000455884 2501 ntAPPRIS P2 TSL 2 BASIC2.73□□□□□ -1.97
RTP4Q96DX8 AC007336.1-201ENST00000576365 3828 ntBASIC2.73□□□□□ -1.97
RTP4Q96DX8 CADM2-AS1-201ENST00000476021 2656 ntTSL 1 (best) BASIC2.73□□□□□ -1.97
RTP4Q96DX8 MTND5P7-201ENST00000413558 1798 ntBASIC2.72□□□□□ -1.97
RTP4Q96DX8 LRIF1-203ENST00000494675 1912 ntAPPRIS ALT2 TSL 2 BASIC2.72□□□□□ -1.97
RTP4Q96DX8 RNU6-778P-201ENST00000363269 103 ntBASIC2.72□□□□□ -1.97
RTP4Q96DX8 Y_RNA.145-201ENST00000363527 102 ntBASIC2.72□□□□□ -1.97
RTP4Q96DX8 Y_RNA.252-201ENST00000364556 101 ntBASIC2.72□□□□□ -1.97
RTP4Q96DX8 RNU6-26P-201ENST00000383985 107 ntBASIC2.72□□□□□ -1.97
RTP4Q96DX8 RNU6-1032P-201ENST00000384100 107 ntBASIC2.72□□□□□ -1.97
RTP4Q96DX8 Y_RNA.459-201ENST00000384251 102 ntBASIC2.72□□□□□ -1.97
RTP4Q96DX8 MIR887-201ENST00000401258 79 ntBASIC2.72□□□□□ -1.97
RTP4Q96DX8 AL356057.3-201ENST00000402607 340 ntBASIC2.72□□□□□ -1.97
RTP4Q96DX8 AL162411.1-201ENST00000413145 526 ntTSL 2 BASIC2.72□□□□□ -1.97
RTP4Q96DX8 AL669831.2-201ENST00000422528 456 ntTSL 5 BASIC2.72□□□□□ -1.97
RTP4Q96DX8 AL353997.1-201ENST00000432936 108 ntBASIC2.72□□□□□ -1.97
RTP4Q96DX8 LINC01549-201ENST00000440664 714 ntTSL 3 BASIC2.72□□□□□ -1.97
RTP4Q96DX8 AC010099.1-201ENST00000455434 375 ntBASIC2.72□□□□□ -1.97
RTP4Q96DX8 AL136164.1-201ENST00000456795 352 ntTSL 3 BASIC2.72□□□□□ -1.97
RTP4Q96DX8 RPL9P9-202ENST00000466501 579 ntBASIC2.72□□□□□ -1.97
RTP4Q96DX8 NDUFA6-201ENST00000470753 475 ntTSL 2 BASIC2.72□□□□□ -1.97
RTP4Q96DX8 AC022447.4-201ENST00000504053 364 ntBASIC2.72□□□□□ -1.97
RTP4Q96DX8 RNU6-1183P-201ENST00000517054 60 ntBASIC2.72□□□□□ -1.97
RTP4Q96DX8 RNU6-711P-201ENST00000517255 106 ntBASIC2.72□□□□□ -1.97
RTP4Q96DX8 LINC02425-201ENST00000536217 376 ntTSL 3 BASIC2.72□□□□□ -1.97
RTP4Q96DX8 SLC27A2-203ENST00000544960 2025 ntTSL 2 BASIC2.72□□□□□ -1.97
RTP4Q96DX8 MIR4635-201ENST00000583759 79 ntBASIC2.72□□□□□ -1.97
RTP4Q96DX8 AL158827.2-201ENST00000602494 330 ntBASIC2.72□□□□□ -1.97
RTP4Q96DX8 AC005014.2-201ENST00000607795 599 ntBASIC2.72□□□□□ -1.97
RTP4Q96DX8 AC083806.3-201ENST00000614016 455 ntBASIC2.72□□□□□ -1.97
RTP4Q96DX8 AL691447.3-201ENST00000635020 330 ntBASIC2.72□□□□□ -1.97
RTP4Q96DX8 HERC4-201ENST00000277817 4371 ntTSL 1 (best) BASIC2.72□□□□□ -1.97
RTP4Q96DX8 AKAP9-202ENST00000358100 10309 ntTSL 1 (best) BASIC2.72□□□□□ -1.97
RTP4Q96DX8 CDC27P3-201ENST00000635418 1910 ntBASIC2.72□□□□□ -1.97
RTP4Q96DX8 E2F5-208ENST00000521429 1551 ntTSL 5 BASIC2.71□□□□□ -1.98
RTP4Q96DX8 MT-ND1-201ENST00000361390 956 ntAPPRIS P1 BASIC2.71□□□□□ -1.98
RTP4Q96DX8 RNU6-490P-201ENST00000362985 107 ntBASIC2.71□□□□□ -1.98
RTP4Q96DX8 U8.8-201ENST00000365399 135 ntBASIC2.71□□□□□ -1.98
RTP4Q96DX8 RNU6-898P-201ENST00000365627 104 ntBASIC2.71□□□□□ -1.98
RTP4Q96DX8 RNU6-72P-201ENST00000384285 79 ntBASIC2.71□□□□□ -1.98
RTP4Q96DX8 RNU6-658P-201ENST00000384606 106 ntBASIC2.71□□□□□ -1.98
RTP4Q96DX8 RNA5SP252-201ENST00000391131 119 ntBASIC2.71□□□□□ -1.98
RTP4Q96DX8 MRPL42P3-201ENST00000401492 326 ntBASIC2.71□□□□□ -1.98
RTP4Q96DX8 AL513475.1-201ENST00000406602 315 ntBASIC2.71□□□□□ -1.98
RTP4Q96DX8 Y_RNA.605-201ENST00000410577 105 ntBASIC2.71□□□□□ -1.98
RTP4Q96DX8 AC099548.1-201ENST00000421443 426 ntBASIC2.71□□□□□ -1.98
RTP4Q96DX8 TTTY8-202ENST00000426035 518 ntTSL 1 (best) BASIC2.71□□□□□ -1.98
RTP4Q96DX8 RPL23AP50-201ENST00000434149 455 ntBASIC2.71□□□□□ -1.98
RTP4Q96DX8 CHEK2P4-201ENST00000450340 246 ntBASIC2.71□□□□□ -1.98
RTP4Q96DX8 TTTY8B-202ENST00000455570 518 ntTSL 1 (best) BASIC2.71□□□□□ -1.98
RTP4Q96DX8 snoU13.28-201ENST00000459235 104 ntBASIC2.71□□□□□ -1.98
RTP4Q96DX8 RPS27AP9-201ENST00000477681 438 ntBASIC2.71□□□□□ -1.98
RTP4Q96DX8 SRP72-202ENST00000504757 745 ntTSL 2 BASIC2.71□□□□□ -1.98
RTP4Q96DX8 AC105758.1-201ENST00000506038 399 ntBASIC2.71□□□□□ -1.98
RTP4Q96DX8 AC091887.1-201ENST00000514002 439 ntTSL 5 BASIC2.71□□□□□ -1.98
RTP4Q96DX8 AC068880.3-201ENST00000519185 179 ntTSL 5 BASIC2.71□□□□□ -1.98
RTP4Q96DX8 AP002884.4-201ENST00000527589 594 ntTSL 3 BASIC2.71□□□□□ -1.98
RTP4Q96DX8 AP000867.2-201ENST00000532468 320 ntBASIC2.71□□□□□ -1.98
RTP4Q96DX8 AC135178.3-204ENST00000585181 451 ntTSL 2 BASIC2.71□□□□□ -1.98
RTP4Q96DX8 AC018692.1-202ENST00000623559 676 ntTSL 5 BASIC2.71□□□□□ -1.98
RTP4Q96DX8 OR4C16-201ENST00000623907 933 ntAPPRIS P1 BASIC2.71□□□□□ -1.98
RTP4Q96DX8 TSGA10-205ENST00000410001 3036 ntAPPRIS P2 TSL 1 (best) BASIC2.71□□□□□ -1.98
RTP4Q96DX8 FAM214A-201ENST00000261844 4217 ntAPPRIS P1 TSL 1 (best) BASIC2.7□□□□□ -1.98
RTP4Q96DX8 NEBL-202ENST00000377122 9216 ntTSL 1 (best) BASIC2.7□□□□□ -1.98
RTP4Q96DX8 ARHGAP28-204ENST00000419673 5492 ntAPPRIS P2 TSL 1 (best) BASIC2.7□□□□□ -1.98
RTP4Q96DX8 LIPI-203ENST00000536861 1529 ntAPPRIS ALT2 TSL 1 (best) BASIC2.7□□□□□ -1.98
RTP4Q96DX8 Y_RNA.133-201ENST00000363428 110 ntBASIC2.7□□□□□ -1.98
RTP4Q96DX8 RNU6-884P-201ENST00000363889 107 ntBASIC2.7□□□□□ -1.98
RTP4Q96DX8 Y_RNA.364-201ENST00000365532 101 ntBASIC2.7□□□□□ -1.98
RTP4Q96DX8 RNU6-574P-201ENST00000384265 107 ntBASIC2.7□□□□□ -1.98
RTP4Q96DX8 Y_RNA.527-201ENST00000384573 102 ntBASIC2.7□□□□□ -1.98
RTP4Q96DX8 Y_RNA.533-201ENST00000384596 114 ntBASIC2.7□□□□□ -1.98
RTP4Q96DX8 SNORA41-201ENST00000384675 132 ntBASIC2.7□□□□□ -1.98
RTP4Q96DX8 MIR518D-201ENST00000385014 87 ntBASIC2.7□□□□□ -1.98
RTP4Q96DX8 TRAJ59-201ENST00000390480 54 ntAPPRIS P1 BASIC2.7□□□□□ -1.98
RTP4Q96DX8 Y_RNA.645-201ENST00000391229 102 ntBASIC2.7□□□□□ -1.98
RTP4Q96DX8 AL592435.1-201ENST00000416401 469 ntTSL 3 BASIC2.7□□□□□ -1.98
RTP4Q96DX8 MTND3P2-201ENST00000438452 342 ntBASIC2.7□□□□□ -1.98
RTP4Q96DX8 AC098831.1-201ENST00000440661 216 ntBASIC2.7□□□□□ -1.98
RTP4Q96DX8 AC011816.1-201ENST00000441346 546 ntBASIC2.7□□□□□ -1.98
RTP4Q96DX8 AC013470.1-201ENST00000453438 462 ntBASIC2.7□□□□□ -1.98
RTP4Q96DX8 AL031183.1-201ENST00000457667 207 ntBASIC2.7□□□□□ -1.98
RTP4Q96DX8 SNORD109B-201ENST00000458961 67 ntBASIC2.7□□□□□ -1.98
RTP4Q96DX8 SNORD109A-201ENST00000459128 67 ntBASIC2.7□□□□□ -1.98
RTP4Q96DX8 RNU6-1037P-201ENST00000459571 107 ntBASIC2.7□□□□□ -1.98
RTP4Q96DX8 MTATP8P1-201ENST00000467115 207 ntBASIC2.7□□□□□ -1.98
RTP4Q96DX8 ODF2L-216ENST00000486215 311 ntTSL 2 BASIC2.7□□□□□ -1.98
RTP4Q96DX8 AC068781.1-201ENST00000488231 618 ntBASIC2.7□□□□□ -1.98
RTP4Q96DX8 RNA5SP282-201ENST00000516355 108 ntBASIC2.7□□□□□ -1.98
RTP4Q96DX8 AC010653.1-201ENST00000571108 881 ntBASIC2.7□□□□□ -1.98
RTP4Q96DX8 MTND4LP5-201ENST00000605152 292 ntBASIC2.7□□□□□ -1.98
RTP4Q96DX8 OR5K1-202ENST00000642057 3466 ntAPPRIS P1 BASIC2.7□□□□□ -1.98
RTP4Q96DX8 TOPORSLP1-203ENST00000493279 2871 ntTSL 4 BASIC2.7□□□□□ -1.98
RTP4Q96DX8 PRKG1-205ENST00000401604 5922 ntTSL 5 BASIC2.7□□□□□ -1.98
RTP4Q96DX8 ANP32E-209ENST00000616917 2989 ntTSL 2 BASIC2.7□□□□□ -1.98
RTP4Q96DX8 RGPD6-201ENST00000329516 7165 ntAPPRIS P1 TSL 1 (best) BASIC2.69□□□□□ -1.98
RTP4Q96DX8 OR4M1-202ENST00000641200 3493 ntAPPRIS P1 BASIC2.69□□□□□ -1.98
RTP4Q96DX8 AC022336.2-201ENST00000568966 2538 ntBASIC2.69□□□□□ -1.98
RTP4Q96DX8 RNY3P11-201ENST00000364153 102 ntBASIC2.69□□□□□ -1.98
RTP4Q96DX8 RNU6-99P-201ENST00000364721 107 ntBASIC2.69□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 106.1 ms