Protein–RNA interactions for Protein: Q96CF2

CHMP4C, Charged multivesicular body protein 4c, humanhuman

Predictions only

Length 233 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4CQ96CF2 AC073410.2-201ENST00000603240 332 ntBASIC3.39□□□□□ -1.87
CHMP4CQ96CF2 C8orf59P2-201ENST00000603441 271 ntBASIC3.39□□□□□ -1.87
CHMP4CQ96CF2 AC138058.1-201ENST00000620572 449 ntTSL 3 BASIC3.39□□□□□ -1.87
CHMP4CQ96CF2 ARHGAP5-202ENST00000345122 9604 ntAPPRIS P3 TSL 5 BASIC3.39□□□□□ -1.87
CHMP4CQ96CF2 FAM214A-201ENST00000261844 4217 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
CHMP4CQ96CF2 ZNF680-202ENST00000447137 2159 ntTSL 2 BASIC3.38□□□□□ -1.87
CHMP4CQ96CF2 GSTA3-201ENST00000211122 902 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
CHMP4CQ96CF2 MT-ND1-201ENST00000361390 956 ntAPPRIS P1 BASIC3.38□□□□□ -1.87
CHMP4CQ96CF2 RNU6-486P-201ENST00000363116 107 ntBASIC3.38□□□□□ -1.87
CHMP4CQ96CF2 SNORA68.1-201ENST00000364537 132 ntBASIC3.38□□□□□ -1.87
CHMP4CQ96CF2 Y_RNA.259-201ENST00000364619 101 ntBASIC3.38□□□□□ -1.87
CHMP4CQ96CF2 RNU6-43P-201ENST00000384302 107 ntBASIC3.38□□□□□ -1.87
CHMP4CQ96CF2 Y_RNA.594-201ENST00000410373 140 ntBASIC3.38□□□□□ -1.87
CHMP4CQ96CF2 NUP35P1-201ENST00000422734 947 ntBASIC3.38□□□□□ -1.87
CHMP4CQ96CF2 AC026355.1-201ENST00000423466 587 ntTSL 5 BASIC3.38□□□□□ -1.87
CHMP4CQ96CF2 AC236972.2-201ENST00000434979 310 ntBASIC3.38□□□□□ -1.87
CHMP4CQ96CF2 AC107083.1-201ENST00000439643 279 ntBASIC3.38□□□□□ -1.87
CHMP4CQ96CF2 U91324.1-201ENST00000442864 447 ntTSL 5 BASIC3.38□□□□□ -1.87
CHMP4CQ96CF2 RPL39P40-201ENST00000445481 146 ntBASIC3.38□□□□□ -1.87
CHMP4CQ96CF2 AL357873.1-201ENST00000449215 282 ntTSL 3 BASIC3.38□□□□□ -1.87
CHMP4CQ96CF2 AL136987.2-201ENST00000457321 684 ntTSL 3 BASIC3.38□□□□□ -1.87
CHMP4CQ96CF2 SNORD5.1-201ENST00000458800 75 ntBASIC3.38□□□□□ -1.87
CHMP4CQ96CF2 RPS29P27-201ENST00000463711 170 ntBASIC3.38□□□□□ -1.87
CHMP4CQ96CF2 LINC02046-202ENST00000481334 390 ntTSL 3 BASIC3.38□□□□□ -1.87
CHMP4CQ96CF2 AC026782.1-201ENST00000512952 449 ntBASIC3.38□□□□□ -1.87
CHMP4CQ96CF2 AC109329.1-201ENST00000518744 317 ntBASIC3.38□□□□□ -1.87
CHMP4CQ96CF2 AC022039.1-201ENST00000527110 488 ntTSL 2 BASIC3.38□□□□□ -1.87
CHMP4CQ96CF2 MIR4273-201ENST00000582824 84 ntBASIC3.38□□□□□ -1.87
CHMP4CQ96CF2 MIR5690-201ENST00000583739 73 ntBASIC3.38□□□□□ -1.87
CHMP4CQ96CF2 RPL23AP88-201ENST00000605759 454 ntBASIC3.38□□□□□ -1.87
CHMP4CQ96CF2 WDR3-201ENST00000349139 9974 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
CHMP4CQ96CF2 ZNF736P3Y-201ENST00000428264 1465 ntBASIC3.37□□□□□ -1.87
CHMP4CQ96CF2 TCF12-203ENST00000343827 3956 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
CHMP4CQ96CF2 AC010329.5-201ENST00000623497 2174 ntBASIC3.37□□□□□ -1.87
CHMP4CQ96CF2 KIAA0825-203ENST00000513200 4942 ntTSL 5 BASIC3.37□□□□□ -1.87
CHMP4CQ96CF2 OR56A5-201ENST00000340110 738 ntBASIC3.37□□□□□ -1.87
CHMP4CQ96CF2 Y_RNA.61-201ENST00000362835 102 ntBASIC3.37□□□□□ -1.87
CHMP4CQ96CF2 Y_RNA.123-201ENST00000363338 102 ntBASIC3.37□□□□□ -1.87
CHMP4CQ96CF2 RNU6-1141P-201ENST00000364520 107 ntBASIC3.37□□□□□ -1.87
CHMP4CQ96CF2 U3.13-201ENST00000364804 214 ntBASIC3.37□□□□□ -1.87
CHMP4CQ96CF2 HMGN2P35-201ENST00000412164 270 ntBASIC3.37□□□□□ -1.87
CHMP4CQ96CF2 MTCO2P27-201ENST00000420740 428 ntBASIC3.37□□□□□ -1.87
CHMP4CQ96CF2 AL445259.1-203ENST00000427828 251 ntTSL 3 BASIC3.37□□□□□ -1.87
CHMP4CQ96CF2 AC236972.1-201ENST00000433225 199 ntBASIC3.37□□□□□ -1.87
CHMP4CQ96CF2 RAB6C-AS1-202ENST00000433431 123 ntBASIC3.37□□□□□ -1.87
CHMP4CQ96CF2 KCNJ6-AS1-201ENST00000435001 357 ntTSL 5 BASIC3.37□□□□□ -1.87
CHMP4CQ96CF2 AL442638.1-201ENST00000443359 237 ntTSL 5 BASIC3.37□□□□□ -1.87
CHMP4CQ96CF2 AL031659.1-201ENST00000447075 539 ntBASIC3.37□□□□□ -1.87
CHMP4CQ96CF2 FTH1P25-201ENST00000447665 469 ntBASIC3.37□□□□□ -1.87
CHMP4CQ96CF2 AC109927.1-202ENST00000511951 282 ntTSL 3 BASIC3.37□□□□□ -1.87
CHMP4CQ96CF2 AC103957.1-201ENST00000517681 503 ntTSL 3 BASIC3.37□□□□□ -1.87
CHMP4CQ96CF2 AC115990.1-201ENST00000526957 301 ntBASIC3.37□□□□□ -1.87
CHMP4CQ96CF2 AC008115.2-201ENST00000539988 241 ntTSL 3 BASIC3.37□□□□□ -1.87
CHMP4CQ96CF2 LINC02095-202ENST00000543512 323 ntTSL 3 BASIC3.37□□□□□ -1.87
CHMP4CQ96CF2 AP003174.2-201ENST00000544663 294 ntTSL 3 BASIC3.37□□□□□ -1.87
CHMP4CQ96CF2 HSPE1P4-201ENST00000550617 308 ntBASIC3.37□□□□□ -1.87
CHMP4CQ96CF2 AC007375.1-201ENST00000554513 578 ntBASIC3.37□□□□□ -1.87
CHMP4CQ96CF2 AC103810.1-201ENST00000579873 453 ntBASIC3.37□□□□□ -1.87
CHMP4CQ96CF2 AC022035.1-201ENST00000579923 302 ntTSL 2 BASIC3.37□□□□□ -1.87
CHMP4CQ96CF2 ZNF616-202ENST00000596290 568 ntTSL 4 BASIC3.37□□□□□ -1.87
CHMP4CQ96CF2 AC009229.3-201ENST00000608056 282 ntBASIC3.37□□□□□ -1.87
CHMP4CQ96CF2 AC069234.5-201ENST00000611056 416 ntBASIC3.37□□□□□ -1.87
CHMP4CQ96CF2 AL161782.1-201ENST00000622930 586 ntTSL 3 BASIC3.37□□□□□ -1.87
CHMP4CQ96CF2 KPNA2P1-201ENST00000458289 1591 ntBASIC3.37□□□□□ -1.87
CHMP4CQ96CF2 DENND4A-202ENST00000443035 8665 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
CHMP4CQ96CF2 RNU6-1059P-201ENST00000363752 98 ntBASIC3.36□□□□□ -1.87
CHMP4CQ96CF2 RNU1-57P-201ENST00000384491 166 ntBASIC3.36□□□□□ -1.87
CHMP4CQ96CF2 TRAJ6-201ENST00000390531 62 ntAPPRIS P1 BASIC3.36□□□□□ -1.87
CHMP4CQ96CF2 AL513477.1-202ENST00000417061 214 ntBASIC3.36□□□□□ -1.87
CHMP4CQ96CF2 AC108938.1-201ENST00000451204 136 ntBASIC3.36□□□□□ -1.87
CHMP4CQ96CF2 TSPY5P-202ENST00000456541 142 ntTSL 3 BASIC3.36□□□□□ -1.87
CHMP4CQ96CF2 Y_RNA.632-201ENST00000459189 102 ntBASIC3.36□□□□□ -1.87
CHMP4CQ96CF2 UBE2DNL-203ENST00000474922 222 ntBASIC3.36□□□□□ -1.87
CHMP4CQ96CF2 RNA5SP367-201ENST00000516557 118 ntBASIC3.36□□□□□ -1.87
CHMP4CQ96CF2 COX6CP5-201ENST00000527162 228 ntBASIC3.36□□□□□ -1.87
CHMP4CQ96CF2 AC008083.3-202ENST00000552063 277 ntTSL 3 BASIC3.36□□□□□ -1.87
CHMP4CQ96CF2 AL139193.1-201ENST00000554967 539 ntTSL 4 BASIC3.36□□□□□ -1.87
CHMP4CQ96CF2 AC007347.1-201ENST00000563879 281 ntTSL 3 BASIC3.36□□□□□ -1.87
CHMP4CQ96CF2 RNU6ATAC35P-201ENST00000609276 444 ntBASIC3.36□□□□□ -1.87
CHMP4CQ96CF2 DLEU2_5.1-201ENST00000615567 84 ntBASIC3.36□□□□□ -1.87
CHMP4CQ96CF2 MIR7157-201ENST00000635801 60 ntBASIC3.36□□□□□ -1.87
CHMP4CQ96CF2 ANKAR-201ENST00000313581 4391 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
CHMP4CQ96CF2 OLFM3-206ENST00000536598 2801 ntTSL 5 BASIC3.35□□□□□ -1.87
CHMP4CQ96CF2 ANKRD18EP-201ENST00000405487 2632 ntBASIC3.35□□□□□ -1.87
CHMP4CQ96CF2 Y_RNA.2-201ENST00000362330 96 ntBASIC3.35□□□□□ -1.87
CHMP4CQ96CF2 Y_RNA.58-201ENST00000362807 102 ntBASIC3.35□□□□□ -1.87
CHMP4CQ96CF2 Y_RNA.154-201ENST00000363624 102 ntBASIC3.35□□□□□ -1.87
CHMP4CQ96CF2 SNORD32A-201ENST00000364805 84 ntBASIC3.35□□□□□ -1.87
CHMP4CQ96CF2 RNY3P1-201ENST00000365085 102 ntBASIC3.35□□□□□ -1.87
CHMP4CQ96CF2 RNY3-201ENST00000365484 102 ntBASIC3.35□□□□□ -1.87
CHMP4CQ96CF2 Y_RNA.473-201ENST00000384333 102 ntBASIC3.35□□□□□ -1.87
CHMP4CQ96CF2 Y_RNA.490-201ENST00000384413 102 ntBASIC3.35□□□□□ -1.87
CHMP4CQ96CF2 MIR181B1-201ENST00000385240 110 ntBASIC3.35□□□□□ -1.87
CHMP4CQ96CF2 SNORA75.4-201ENST00000391278 119 ntBASIC3.35□□□□□ -1.87
CHMP4CQ96CF2 MIR887-201ENST00000401258 79 ntBASIC3.35□□□□□ -1.87
CHMP4CQ96CF2 RNU2-52P-201ENST00000410680 190 ntBASIC3.35□□□□□ -1.87
CHMP4CQ96CF2 EIF1AXP1-201ENST00000419267 435 ntBASIC3.35□□□□□ -1.87
CHMP4CQ96CF2 RPS29P6-201ENST00000438196 145 ntBASIC3.35□□□□□ -1.87
CHMP4CQ96CF2 AL627309.4-201ENST00000496488 457 ntTSL 5 BASIC3.35□□□□□ -1.87
CHMP4CQ96CF2 AC016632.1-201ENST00000503994 196 ntBASIC3.35□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 110 ms