Protein–RNA interactions for Protein: Q8WXE1

ATRIP, ATR-interacting protein, humanhuman

Predictions only

Length 791 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATRIPQ8WXE1 LINC02425-201ENST00000536217 376 ntTSL 3 BASIC3.3□□□□□ -1.88
ATRIPQ8WXE1 AC103996.1-201ENST00000555468 102 ntBASIC3.3□□□□□ -1.88
ATRIPQ8WXE1 MIR4680-201ENST00000580906 66 ntBASIC3.3□□□□□ -1.88
ATRIPQ8WXE1 AC008121.1-201ENST00000603244 268 ntBASIC3.3□□□□□ -1.88
ATRIPQ8WXE1 AC009314.1-201ENST00000603871 304 ntBASIC3.3□□□□□ -1.88
ATRIPQ8WXE1 MIR663AHG-231ENST00000609044 590 ntTSL 5 BASIC3.3□□□□□ -1.88
ATRIPQ8WXE1 AC091925.1-201ENST00000623204 462 ntBASIC3.3□□□□□ -1.88
ATRIPQ8WXE1 HSPA4L-202ENST00000505726 2639 ntTSL 2 BASIC3.29□□□□□ -1.88
ATRIPQ8WXE1 RNU6-428P-201ENST00000362942 107 ntBASIC3.29□□□□□ -1.88
ATRIPQ8WXE1 RNU6-1180P-201ENST00000364935 107 ntBASIC3.29□□□□□ -1.88
ATRIPQ8WXE1 Y_RNA.364-201ENST00000365532 101 ntBASIC3.29□□□□□ -1.88
ATRIPQ8WXE1 U8.9-201ENST00000365667 134 ntBASIC3.29□□□□□ -1.88
ATRIPQ8WXE1 RNU6-1032P-201ENST00000384100 107 ntBASIC3.29□□□□□ -1.88
ATRIPQ8WXE1 RNU6-658P-201ENST00000384606 106 ntBASIC3.29□□□□□ -1.88
ATRIPQ8WXE1 MIR518D-201ENST00000385014 87 ntBASIC3.29□□□□□ -1.88
ATRIPQ8WXE1 MIR888-201ENST00000401186 77 ntBASIC3.29□□□□□ -1.88
ATRIPQ8WXE1 AC099548.1-201ENST00000421443 426 ntBASIC3.29□□□□□ -1.88
ATRIPQ8WXE1 AL139281.1-201ENST00000422120 335 ntBASIC3.29□□□□□ -1.88
ATRIPQ8WXE1 AL669831.2-201ENST00000422528 456 ntTSL 5 BASIC3.29□□□□□ -1.88
ATRIPQ8WXE1 AC008267.5-201ENST00000424928 265 ntBASIC3.29□□□□□ -1.88
ATRIPQ8WXE1 AL731684.2-201ENST00000426839 333 ntTSL 5 BASIC3.29□□□□□ -1.88
ATRIPQ8WXE1 AL353997.1-201ENST00000432936 108 ntBASIC3.29□□□□□ -1.88
ATRIPQ8WXE1 MTND3P2-201ENST00000438452 342 ntBASIC3.29□□□□□ -1.88
ATRIPQ8WXE1 RPL37P4-201ENST00000448908 268 ntBASIC3.29□□□□□ -1.88
ATRIPQ8WXE1 ITCH-AS1-201ENST00000454205 299 ntTSL 5 BASIC3.29□□□□□ -1.88
ATRIPQ8WXE1 AC021146.2-201ENST00000504736 556 ntBASIC3.29□□□□□ -1.88
ATRIPQ8WXE1 SEM1P1-201ENST00000506694 209 ntBASIC3.29□□□□□ -1.88
ATRIPQ8WXE1 AC091976.1-202ENST00000509211 630 ntTSL 3 BASIC3.29□□□□□ -1.88
ATRIPQ8WXE1 Y_RNA.687-201ENST00000516558 91 ntBASIC3.29□□□□□ -1.88
ATRIPQ8WXE1 HTN3-202ENST00000526767 578 ntAPPRIS P2 TSL 1 (best) BASIC3.29□□□□□ -1.88
ATRIPQ8WXE1 MIR4782-201ENST00000577987 79 ntBASIC3.29□□□□□ -1.88
ATRIPQ8WXE1 MIR3162-201ENST00000581818 82 ntBASIC3.29□□□□□ -1.88
ATRIPQ8WXE1 MIR4435-1-201ENST00000582552 80 ntBASIC3.29□□□□□ -1.88
ATRIPQ8WXE1 KIAA0825-203ENST00000513200 4942 ntTSL 5 BASIC3.29□□□□□ -1.88
ATRIPQ8WXE1 NEBL-202ENST00000377122 9216 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
ATRIPQ8WXE1 SIRT1-202ENST00000403579 3333 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
ATRIPQ8WXE1 C6orf10-202ENST00000375015 2173 ntAPPRIS ALT2 TSL 5 BASIC3.28□□□□□ -1.88
ATRIPQ8WXE1 FPGT-TNNI3K-202ENST00000370895 7566 ntTSL 2 BASIC3.28□□□□□ -1.88
ATRIPQ8WXE1 MUM1L1-203ENST00000372552 3957 ntAPPRIS P1 TSL 5 BASIC3.28□□□□□ -1.88
ATRIPQ8WXE1 AC000403.1-201ENST00000613696 3585 ntBASIC3.28□□□□□ -1.88
ATRIPQ8WXE1 RNU6-490P-201ENST00000362985 107 ntBASIC3.28□□□□□ -1.88
ATRIPQ8WXE1 MIR627-201ENST00000384979 97 ntBASIC3.28□□□□□ -1.88
ATRIPQ8WXE1 RNU6-1106P-201ENST00000390845 107 ntBASIC3.28□□□□□ -1.88
ATRIPQ8WXE1 MIR887-201ENST00000401258 79 ntBASIC3.28□□□□□ -1.88
ATRIPQ8WXE1 MRPL42P3-201ENST00000401492 326 ntBASIC3.28□□□□□ -1.88
ATRIPQ8WXE1 AL513475.1-201ENST00000406602 315 ntBASIC3.28□□□□□ -1.88
ATRIPQ8WXE1 RPL26P27-201ENST00000414397 437 ntBASIC3.28□□□□□ -1.88
ATRIPQ8WXE1 AL117339.3-201ENST00000418733 162 ntBASIC3.28□□□□□ -1.88
ATRIPQ8WXE1 TOMM20P4-201ENST00000427861 435 ntBASIC3.28□□□□□ -1.88
ATRIPQ8WXE1 AC098831.1-201ENST00000440661 216 ntBASIC3.28□□□□□ -1.88
ATRIPQ8WXE1 DAP3P1-201ENST00000441522 278 ntBASIC3.28□□□□□ -1.88
ATRIPQ8WXE1 AC114501.3-201ENST00000453648 164 ntTSL 5 BASIC3.28□□□□□ -1.88
ATRIPQ8WXE1 RPS29P20-201ENST00000489592 171 ntBASIC3.28□□□□□ -1.88
ATRIPQ8WXE1 AC012055.2-201ENST00000504167 335 ntTSL 3 BASIC3.28□□□□□ -1.88
ATRIPQ8WXE1 AC113383.1-204ENST00000507060 552 ntTSL 3 BASIC3.28□□□□□ -1.88
ATRIPQ8WXE1 Y_RNA.720-201ENST00000517166 92 ntBASIC3.28□□□□□ -1.88
ATRIPQ8WXE1 CBX3P8-201ENST00000532412 525 ntBASIC3.28□□□□□ -1.88
ATRIPQ8WXE1 OR4C16-201ENST00000623907 933 ntAPPRIS P1 BASIC3.28□□□□□ -1.88
ATRIPQ8WXE1 AL591030.1-201ENST00000626131 627 ntTSL 3 BASIC3.28□□□□□ -1.88
ATRIPQ8WXE1 HS1BP3-208ENST00000631166 78 ntTSL 5 BASIC3.28□□□□□ -1.88
ATRIPQ8WXE1 LRIF1-203ENST00000494675 1912 ntAPPRIS ALT2 TSL 2 BASIC3.28□□□□□ -1.88
ATRIPQ8WXE1 E2F5-208ENST00000521429 1551 ntTSL 5 BASIC3.28□□□□□ -1.88
ATRIPQ8WXE1 CHD9-203ENST00000447540 11509 ntTSL 5 BASIC3.27□□□□□ -1.89
ATRIPQ8WXE1 CDC27P3-201ENST00000635418 1910 ntBASIC3.27□□□□□ -1.89
ATRIPQ8WXE1 ZBBX-201ENST00000307529 3071 ntAPPRIS ALT2 TSL 5 BASIC3.27□□□□□ -1.89
ATRIPQ8WXE1 ZBBX-204ENST00000392767 3071 ntAPPRIS ALT2 TSL 5 BASIC3.27□□□□□ -1.89
ATRIPQ8WXE1 RPL9P7-201ENST00000330965 580 ntBASIC3.27□□□□□ -1.89
ATRIPQ8WXE1 RNU6-72P-201ENST00000384285 79 ntBASIC3.27□□□□□ -1.89
ATRIPQ8WXE1 RNU6-933P-201ENST00000384424 107 ntBASIC3.27□□□□□ -1.89
ATRIPQ8WXE1 Y_RNA.527-201ENST00000384573 102 ntBASIC3.27□□□□□ -1.89
ATRIPQ8WXE1 MIR34A-201ENST00000385130 110 ntBASIC3.27□□□□□ -1.89
ATRIPQ8WXE1 MIR767-201ENST00000390228 109 ntBASIC3.27□□□□□ -1.89
ATRIPQ8WXE1 RNU6-174P-201ENST00000410406 106 ntBASIC3.27□□□□□ -1.89
ATRIPQ8WXE1 RNA5SP344-201ENST00000411081 104 ntBASIC3.27□□□□□ -1.89
ATRIPQ8WXE1 AC009414.1-201ENST00000427200 443 ntBASIC3.27□□□□□ -1.89
ATRIPQ8WXE1 AL513043.1-201ENST00000439124 535 ntBASIC3.27□□□□□ -1.89
ATRIPQ8WXE1 AC009296.1-201ENST00000443146 155 ntBASIC3.27□□□□□ -1.89
ATRIPQ8WXE1 RNU6-1037P-201ENST00000459571 107 ntBASIC3.27□□□□□ -1.89
ATRIPQ8WXE1 RPL9P9-202ENST00000466501 579 ntBASIC3.27□□□□□ -1.89
ATRIPQ8WXE1 RPS27AP10-201ENST00000496103 208 ntBASIC3.27□□□□□ -1.89
ATRIPQ8WXE1 SRP72-202ENST00000504757 745 ntTSL 2 BASIC3.27□□□□□ -1.89
ATRIPQ8WXE1 AC105758.1-201ENST00000506038 399 ntBASIC3.27□□□□□ -1.89
ATRIPQ8WXE1 RNA5SP356-201ENST00000515972 94 ntBASIC3.27□□□□□ -1.89
ATRIPQ8WXE1 AC009812.2-201ENST00000517657 457 ntBASIC3.27□□□□□ -1.89
ATRIPQ8WXE1 CPDP1-201ENST00000579660 283 ntBASIC3.27□□□□□ -1.89
ATRIPQ8WXE1 AL355598.1-201ENST00000604169 202 ntBASIC3.27□□□□□ -1.89
ATRIPQ8WXE1 AP000787.2-201ENST00000604432 568 ntBASIC3.27□□□□□ -1.89
ATRIPQ8WXE1 MTND4LP5-201ENST00000605152 292 ntBASIC3.27□□□□□ -1.89
ATRIPQ8WXE1 AC005014.2-201ENST00000607795 599 ntBASIC3.27□□□□□ -1.89
ATRIPQ8WXE1 AC008121.3-201ENST00000618726 433 ntBASIC3.27□□□□□ -1.89
ATRIPQ8WXE1 UCA1.1-201ENST00000620952 75 ntBASIC3.27□□□□□ -1.89
ATRIPQ8WXE1 OR51A4-202ENST00000641898 4393 ntAPPRIS P1 BASIC3.26□□□□□ -1.89
ATRIPQ8WXE1 RNU6-1309P-201ENST00000363305 108 ntBASIC3.26□□□□□ -1.89
ATRIPQ8WXE1 Y_RNA.158-201ENST00000363651 101 ntBASIC3.26□□□□□ -1.89
ATRIPQ8WXE1 SNORA41-201ENST00000384675 132 ntBASIC3.26□□□□□ -1.89
ATRIPQ8WXE1 RNU6-1105P-201ENST00000384774 107 ntBASIC3.26□□□□□ -1.89
ATRIPQ8WXE1 SNORA26.7-201ENST00000391288 122 ntBASIC3.26□□□□□ -1.89
ATRIPQ8WXE1 Y_RNA.605-201ENST00000410577 105 ntBASIC3.26□□□□□ -1.89
ATRIPQ8WXE1 RNU2-25P-201ENST00000411041 191 ntBASIC3.26□□□□□ -1.89
ATRIPQ8WXE1 AL592435.1-201ENST00000416401 469 ntTSL 3 BASIC3.26□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 156.9 ms