Protein–RNA interactions for Protein: Q8TF72

SHROOM3, Protein Shroom3, humanhuman

Predictions only

Length 1,996 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM3Q8TF72 AC093788.1-201ENST00000609356 927 ntBASIC1.45□□□□□ -2.18
SHROOM3Q8TF72 AC004852.3-201ENST00000614131 326 ntBASIC1.45□□□□□ -2.18
SHROOM3Q8TF72 U6.99-201ENST00000637524 83 ntBASIC1.45□□□□□ -2.18
SHROOM3Q8TF72 AC099654.12-201ENST00000639868 649 ntBASIC1.45□□□□□ -2.18
SHROOM3Q8TF72 IL33-202ENST00000417746 2327 ntTSL 2 BASIC1.44□□□□□ -2.18
SHROOM3Q8TF72 RNU6-960P-201ENST00000364056 120 ntBASIC1.44□□□□□ -2.18
SHROOM3Q8TF72 RNU6-270P-201ENST00000364131 105 ntBASIC1.44□□□□□ -2.18
SHROOM3Q8TF72 RNA5SP125-201ENST00000364843 120 ntBASIC1.44□□□□□ -2.18
SHROOM3Q8TF72 RNU6-1280P-201ENST00000365211 107 ntBASIC1.44□□□□□ -2.18
SHROOM3Q8TF72 RNU6-1083P-201ENST00000384022 107 ntBASIC1.44□□□□□ -2.18
SHROOM3Q8TF72 MTATP6P18-201ENST00000417994 673 ntBASIC1.44□□□□□ -2.18
SHROOM3Q8TF72 AC083900.1-201ENST00000421964 469 ntTSL 2 BASIC1.44□□□□□ -2.18
SHROOM3Q8TF72 AL589986.2-201ENST00000429352 397 ntTSL 2 BASIC1.44□□□□□ -2.18
SHROOM3Q8TF72 MICF-203ENST00000432679 129 ntBASIC1.44□□□□□ -2.18
SHROOM3Q8TF72 AL031667.1-201ENST00000440222 725 ntBASIC1.44□□□□□ -2.18
SHROOM3Q8TF72 IPO7P1-201ENST00000442031 636 ntBASIC1.44□□□□□ -2.18
SHROOM3Q8TF72 AL360271.2-201ENST00000447710 161 ntBASIC1.44□□□□□ -2.18
SHROOM3Q8TF72 RNU7-23P-201ENST00000459465 62 ntBASIC1.44□□□□□ -2.18
SHROOM3Q8TF72 MTCO3P9-201ENST00000506989 781 ntBASIC1.44□□□□□ -2.18
SHROOM3Q8TF72 LINC02220-201ENST00000510065 270 ntTSL 5 BASIC1.44□□□□□ -2.18
SHROOM3Q8TF72 MTND3P5-201ENST00000512798 333 ntBASIC1.44□□□□□ -2.18
SHROOM3Q8TF72 RNU6-430P-201ENST00000517078 107 ntBASIC1.44□□□□□ -2.18
SHROOM3Q8TF72 RNU6-685P-201ENST00000517088 95 ntBASIC1.44□□□□□ -2.18
SHROOM3Q8TF72 SKP1-203ENST00000517625 876 ntAPPRIS P4 TSL 3 BASIC1.44□□□□□ -2.18
SHROOM3Q8TF72 BTF3P12-201ENST00000519620 469 ntBASIC1.44□□□□□ -2.18
SHROOM3Q8TF72 AP001893.2-201ENST00000526949 202 ntBASIC1.44□□□□□ -2.18
SHROOM3Q8TF72 LINC02546-202ENST00000528119 801 ntTSL 5 BASIC1.44□□□□□ -2.18
SHROOM3Q8TF72 AC087362.2-201ENST00000529325 256 ntTSL 3 BASIC1.44□□□□□ -2.18
SHROOM3Q8TF72 MTND1P15-201ENST00000579262 949 ntBASIC1.44□□□□□ -2.18
SHROOM3Q8TF72 AC008521.1-201ENST00000587471 187 ntBASIC1.44□□□□□ -2.18
SHROOM3Q8TF72 AL391646.1-201ENST00000603860 190 ntBASIC1.44□□□□□ -2.18
SHROOM3Q8TF72 AC068506.1-202ENST00000613388 545 ntTSL 3 BASIC1.44□□□□□ -2.18
SHROOM3Q8TF72 SCARNA4-202ENST00000625402 129 ntBASIC1.44□□□□□ -2.18
SHROOM3Q8TF72 SMARCAD1-206ENST00000509418 2348 ntTSL 2 BASIC1.44□□□□□ -2.18
SHROOM3Q8TF72 Y_RNA.324-201ENST00000365165 102 ntBASIC1.43□□□□□ -2.18
SHROOM3Q8TF72 S100A12-201ENST00000368737 518 ntAPPRIS P1 TSL 1 (best) BASIC1.43□□□□□ -2.18
SHROOM3Q8TF72 Y_RNA.402-201ENST00000383972 102 ntBASIC1.43□□□□□ -2.18
SHROOM3Q8TF72 Y_RNA.559-201ENST00000384686 107 ntBASIC1.43□□□□□ -2.18
SHROOM3Q8TF72 RNU6-606P-201ENST00000384721 111 ntBASIC1.43□□□□□ -2.18
SHROOM3Q8TF72 AL136369.2-201ENST00000420825 537 ntTSL 3 BASIC1.43□□□□□ -2.18
SHROOM3Q8TF72 AF124730.1-201ENST00000430001 327 ntTSL 2 BASIC1.43□□□□□ -2.18
SHROOM3Q8TF72 PCDH9-AS1-201ENST00000430861 532 ntTSL 2 BASIC1.43□□□□□ -2.18
SHROOM3Q8TF72 AL451060.1-203ENST00000431307 362 ntTSL 3 BASIC1.43□□□□□ -2.18
SHROOM3Q8TF72 AL596276.1-201ENST00000434465 418 ntBASIC1.43□□□□□ -2.18
SHROOM3Q8TF72 AL714022.1-201ENST00000439897 151 ntBASIC1.43□□□□□ -2.18
SHROOM3Q8TF72 AC069542.1-201ENST00000445235 557 ntTSL 3 BASIC1.43□□□□□ -2.18
SHROOM3Q8TF72 LINC01201-202ENST00000451431 401 ntTSL 3 BASIC1.43□□□□□ -2.18
SHROOM3Q8TF72 CECR9-201ENST00000453421 199 ntBASIC1.43□□□□□ -2.18
SHROOM3Q8TF72 AC116562.3-201ENST00000506136 177 ntBASIC1.43□□□□□ -2.18
SHROOM3Q8TF72 LINC02174-201ENST00000508977 553 ntTSL 3 BASIC1.43□□□□□ -2.18
SHROOM3Q8TF72 SNORA25.11-201ENST00000515935 105 ntBASIC1.43□□□□□ -2.18
SHROOM3Q8TF72 SNORA31.23-201ENST00000517219 133 ntBASIC1.43□□□□□ -2.18
SHROOM3Q8TF72 AP004607.1-201ENST00000524456 203 ntBASIC1.43□□□□□ -2.18
SHROOM3Q8TF72 AL358937.1-201ENST00000524512 336 ntTSL 2 BASIC1.43□□□□□ -2.18
SHROOM3Q8TF72 AC068587.5-201ENST00000528506 175 ntBASIC1.43□□□□□ -2.18
SHROOM3Q8TF72 AC104383.1-201ENST00000530297 370 ntBASIC1.43□□□□□ -2.18
SHROOM3Q8TF72 AC021739.1-201ENST00000559631 174 ntBASIC1.43□□□□□ -2.18
SHROOM3Q8TF72 AP005530.1-201ENST00000572608 567 ntTSL 3 BASIC1.43□□□□□ -2.18
SHROOM3Q8TF72 MIR3122-201ENST00000577243 73 ntBASIC1.43□□□□□ -2.18
SHROOM3Q8TF72 AC007631.1-201ENST00000578545 189 ntTSL 3 BASIC1.43□□□□□ -2.18
SHROOM3Q8TF72 MIR5692A1-201ENST00000580523 69 ntBASIC1.43□□□□□ -2.18
SHROOM3Q8TF72 FAM106DP-201ENST00000586416 501 ntBASIC1.43□□□□□ -2.18
SHROOM3Q8TF72 AC005357.2-201ENST00000586473 583 ntTSL 2 BASIC1.43□□□□□ -2.18
SHROOM3Q8TF72 AC078795.2-201ENST00000602835 1252 ntBASIC1.43□□□□□ -2.18
SHROOM3Q8TF72 AC008121.1-201ENST00000603244 268 ntBASIC1.43□□□□□ -2.18
SHROOM3Q8TF72 AL589743.7-201ENST00000612637 233 ntBASIC1.43□□□□□ -2.18
SHROOM3Q8TF72 uc_338.14-201ENST00000613162 166 ntBASIC1.43□□□□□ -2.18
SHROOM3Q8TF72 TEX15-203ENST00000638951 11341 ntAPPRIS P1 TSL 5 BASIC1.43□□□□□ -2.18
SHROOM3Q8TF72 ANKRD36BP1-202ENST00000604892 1417 ntBASIC1.43□□□□□ -2.18
SHROOM3Q8TF72 SNORD14B-201ENST00000364533 90 ntBASIC1.43□□□□□ -2.18
SHROOM3Q8TF72 RNU1-93P-201ENST00000364704 169 ntBASIC1.43□□□□□ -2.18
SHROOM3Q8TF72 RNU6-1215P-201ENST00000384441 102 ntBASIC1.43□□□□□ -2.18
SHROOM3Q8TF72 RNU4-55P-201ENST00000410731 137 ntBASIC1.43□□□□□ -2.18
SHROOM3Q8TF72 RNU6-1245P-201ENST00000411130 106 ntBASIC1.43□□□□□ -2.18
SHROOM3Q8TF72 AC016831.2-201ENST00000417179 352 ntBASIC1.43□□□□□ -2.18
SHROOM3Q8TF72 AC138623.1-201ENST00000418060 216 ntBASIC1.43□□□□□ -2.18
SHROOM3Q8TF72 U51244.1-201ENST00000423120 374 ntTSL 3 BASIC1.43□□□□□ -2.18
SHROOM3Q8TF72 AL513185.2-201ENST00000425543 193 ntBASIC1.43□□□□□ -2.18
SHROOM3Q8TF72 SKA2P1-201ENST00000425592 390 ntBASIC1.43□□□□□ -2.18
SHROOM3Q8TF72 PRPS1P1-201ENST00000445305 876 ntBASIC1.43□□□□□ -2.18
SHROOM3Q8TF72 HMGN2P18-201ENST00000450680 270 ntBASIC1.43□□□□□ -2.18
SHROOM3Q8TF72 RNU7-26P-201ENST00000458980 63 ntBASIC1.43□□□□□ -2.18
SHROOM3Q8TF72 RNU7-182P-201ENST00000459009 62 ntBASIC1.43□□□□□ -2.18
SHROOM3Q8TF72 RNU7-63P-201ENST00000459054 62 ntBASIC1.43□□□□□ -2.18
SHROOM3Q8TF72 FAM92A-209ENST00000519679 538 ntTSL 4 BASIC1.43□□□□□ -2.18
SHROOM3Q8TF72 AP005435.4-201ENST00000529514 284 ntBASIC1.43□□□□□ -2.18
SHROOM3Q8TF72 NACAP3-201ENST00000552100 481 ntBASIC1.43□□□□□ -2.18
SHROOM3Q8TF72 HIF1AP1-201ENST00000553642 175 ntBASIC1.43□□□□□ -2.18
SHROOM3Q8TF72 AC105245.1-201ENST00000581934 244 ntBASIC1.43□□□□□ -2.18
SHROOM3Q8TF72 AC090227.2-201ENST00000591105 340 ntTSL 5 BASIC1.43□□□□□ -2.18
SHROOM3Q8TF72 AL162413.1-201ENST00000603198 110 ntBASIC1.43□□□□□ -2.18
SHROOM3Q8TF72 AC064807.4-201ENST00000607201 407 ntBASIC1.43□□□□□ -2.18
SHROOM3Q8TF72 AC091304.9-201ENST00000612091 226 ntBASIC1.43□□□□□ -2.18
SHROOM3Q8TF72 HULC.1-201ENST00000612720 240 ntBASIC1.43□□□□□ -2.18
SHROOM3Q8TF72 AP001486.3-201ENST00000615334 372 ntBASIC1.43□□□□□ -2.18
SHROOM3Q8TF72 U6.42-201ENST00000618440 107 ntBASIC1.43□□□□□ -2.18
SHROOM3Q8TF72 AL031601.2-202ENST00000622650 282 ntBASIC1.43□□□□□ -2.18
SHROOM3Q8TF72 MIR7157-201ENST00000635801 60 ntBASIC1.43□□□□□ -2.18
SHROOM3Q8TF72 MGAT4C-209ENST00000611864 25116 ntAPPRIS P1 TSL 5 BASIC1.42□□□□□ -2.18
SHROOM3Q8TF72 MTND5P10-201ENST00000603719 1809 ntBASIC1.42□□□□□ -2.18
Retrieved 100 of 98,524 protein–RNA pairs in 157.4 ms