Protein–RNA interactions for Protein: Q8NCU1

CCDC197, Putative uncharacterized protein CCDC197, humanhuman

Predictions only

Length 140 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC197Q8NCU1 LINC01198-202ENST00000458282 558 ntTSL 5 BASIC2.04□□□□□ -2.08
CCDC197Q8NCU1 HMGN2P26-201ENST00000463169 339 ntBASIC2.04□□□□□ -2.08
CCDC197Q8NCU1 FTH1P2-201ENST00000466086 412 ntBASIC2.04□□□□□ -2.08
CCDC197Q8NCU1 AC010255.2-201ENST00000505209 428 ntTSL 3 BASIC2.04□□□□□ -2.08
CCDC197Q8NCU1 LINC02064-201ENST00000506492 470 ntTSL 5 BASIC2.04□□□□□ -2.08
CCDC197Q8NCU1 AC124290.1-202ENST00000523342 387 ntTSL 3 BASIC2.04□□□□□ -2.08
CCDC197Q8NCU1 AC025423.5-201ENST00000550230 219 ntBASIC2.04□□□□□ -2.08
CCDC197Q8NCU1 AC087463.2-201ENST00000565943 472 ntTSL 3 BASIC2.04□□□□□ -2.08
CCDC197Q8NCU1 MIR4325-201ENST00000583049 90 ntBASIC2.04□□□□□ -2.08
CCDC197Q8NCU1 ELOCP29-201ENST00000588193 334 ntBASIC2.04□□□□□ -2.08
CCDC197Q8NCU1 AC018889.1-201ENST00000605372 397 ntBASIC2.04□□□□□ -2.08
CCDC197Q8NCU1 AC004492.1-201ENST00000607036 742 ntBASIC2.04□□□□□ -2.08
CCDC197Q8NCU1 AL357078.3-201ENST00000607528 618 ntBASIC2.04□□□□□ -2.08
CCDC197Q8NCU1 AC064836.2-201ENST00000609491 462 ntBASIC2.04□□□□□ -2.08
CCDC197Q8NCU1 MIR6798-201ENST00000612887 67 ntBASIC2.04□□□□□ -2.08
CCDC197Q8NCU1 RMDN2-203ENST00000402091 1973 ntTSL 2 BASIC2.03□□□□□ -2.08
CCDC197Q8NCU1 AP000560.1-201ENST00000624150 1937 ntBASIC2.03□□□□□ -2.08
CCDC197Q8NCU1 RNY4P14-201ENST00000363656 96 ntBASIC2.03□□□□□ -2.08
CCDC197Q8NCU1 5S_rRNA.1-201ENST00000364415 116 ntBASIC2.03□□□□□ -2.08
CCDC197Q8NCU1 TRAJ21-201ENST00000390516 55 ntAPPRIS P1 BASIC2.03□□□□□ -2.08
CCDC197Q8NCU1 SNORA48.7-201ENST00000391302 135 ntBASIC2.03□□□□□ -2.08
CCDC197Q8NCU1 RN7SKP61-201ENST00000410642 295 ntBASIC2.03□□□□□ -2.08
CCDC197Q8NCU1 RNU2-48P-201ENST00000410694 191 ntBASIC2.03□□□□□ -2.08
CCDC197Q8NCU1 MTCO1P21-201ENST00000416634 589 ntBASIC2.03□□□□□ -2.08
CCDC197Q8NCU1 LINC02541-201ENST00000427157 327 ntTSL 3 BASIC2.03□□□□□ -2.08
CCDC197Q8NCU1 RPS3P1-201ENST00000456781 192 ntBASIC2.03□□□□□ -2.08
CCDC197Q8NCU1 MAGI1-AS1-201ENST00000472514 591 ntTSL 3 BASIC2.03□□□□□ -2.08
CCDC197Q8NCU1 LINC00971-201ENST00000482721 535 ntTSL 2 BASIC2.03□□□□□ -2.08
CCDC197Q8NCU1 HMGB1P35-201ENST00000503360 598 ntBASIC2.03□□□□□ -2.08
CCDC197Q8NCU1 BMPR1B-AS1-201ENST00000510795 511 ntTSL 3 BASIC2.03□□□□□ -2.08
CCDC197Q8NCU1 AC034114.1-201ENST00000520293 285 ntBASIC2.03□□□□□ -2.08
CCDC197Q8NCU1 AC018630.3-201ENST00000542637 96 ntBASIC2.03□□□□□ -2.08
CCDC197Q8NCU1 AP001363.1-201ENST00000544108 264 ntTSL 3 BASIC2.03□□□□□ -2.08
CCDC197Q8NCU1 AC012594.1-269ENST00000600489 628 ntTSL 5 BASIC2.03□□□□□ -2.08
CCDC197Q8NCU1 AC012493.3-201ENST00000604494 112 ntBASIC2.03□□□□□ -2.08
CCDC197Q8NCU1 AP001836.1-201ENST00000604675 523 ntBASIC2.03□□□□□ -2.08
CCDC197Q8NCU1 AL356157.2-201ENST00000605122 111 ntBASIC2.03□□□□□ -2.08
CCDC197Q8NCU1 AC104458.1-201ENST00000608243 463 ntBASIC2.03□□□□□ -2.08
CCDC197Q8NCU1 RMST_3.1-201ENST00000611651 109 ntBASIC2.03□□□□□ -2.08
CCDC197Q8NCU1 FAM157A-202ENST00000615155 405 ntBASIC2.03□□□□□ -2.08
CCDC197Q8NCU1 DLD-214ENST00000639772 421 ntTSL 5 BASIC2.03□□□□□ -2.08
CCDC197Q8NCU1 SYT14-201ENST00000367015 5094 ntAPPRIS ALT2 TSL 1 (best) BASIC2.03□□□□□ -2.08
CCDC197Q8NCU1 ATP13A3-201ENST00000256031 7322 ntAPPRIS P1 TSL 5 BASIC2.03□□□□□ -2.09
CCDC197Q8NCU1 Y_RNA.450-201ENST00000384198 113 ntBASIC2.02□□□□□ -2.09
CCDC197Q8NCU1 AP000275.1-201ENST00000411943 390 ntBASIC2.02□□□□□ -2.09
CCDC197Q8NCU1 AC004014.1-201ENST00000413406 538 ntTSL 4 BASIC2.02□□□□□ -2.09
CCDC197Q8NCU1 AL500522.1-201ENST00000423667 318 ntTSL 3 BASIC2.02□□□□□ -2.09
CCDC197Q8NCU1 MTND1P34-201ENST00000438556 671 ntBASIC2.02□□□□□ -2.09
CCDC197Q8NCU1 AL359672.1-201ENST00000442302 409 ntBASIC2.02□□□□□ -2.09
CCDC197Q8NCU1 GPM6BP3-201ENST00000442797 145 ntBASIC2.02□□□□□ -2.09
CCDC197Q8NCU1 AC083904.1-201ENST00000487828 231 ntBASIC2.02□□□□□ -2.09
CCDC197Q8NCU1 AC022447.4-201ENST00000504053 364 ntBASIC2.02□□□□□ -2.09
CCDC197Q8NCU1 RPL39P5-202ENST00000512505 151 ntBASIC2.02□□□□□ -2.09
CCDC197Q8NCU1 SCARNA16.3-201ENST00000516595 184 ntBASIC2.02□□□□□ -2.09
CCDC197Q8NCU1 MTND1P5-201ENST00000517906 940 ntBASIC2.02□□□□□ -2.09
CCDC197Q8NCU1 AC009558.1-201ENST00000561174 581 ntTSL 4 BASIC2.02□□□□□ -2.09
CCDC197Q8NCU1 AC005909.1-201ENST00000577835 755 ntTSL 3 BASIC2.02□□□□□ -2.09
CCDC197Q8NCU1 AL034555.1-201ENST00000604816 211 ntBASIC2.02□□□□□ -2.09
CCDC197Q8NCU1 ELOCP5-201ENST00000604924 333 ntBASIC2.02□□□□□ -2.09
CCDC197Q8NCU1 DCAF17-212ENST00000611110 975 ntTSL 1 (best) BASIC2.02□□□□□ -2.09
CCDC197Q8NCU1 AL162373.1-201ENST00000620433 407 ntBASIC2.02□□□□□ -2.09
CCDC197Q8NCU1 SNORD98-201ENST00000636377 67 ntBASIC2.02□□□□□ -2.09
CCDC197Q8NCU1 ARHGAP15-202ENST00000409869 2968 ntTSL 5 BASIC2.01□□□□□ -2.09
CCDC197Q8NCU1 SENP7-205ENST00000394091 4434 ntAPPRIS ALT2 TSL 1 (best) BASIC2.01□□□□□ -2.09
CCDC197Q8NCU1 RNU6-1329P-201ENST00000365664 107 ntBASIC2.01□□□□□ -2.09
CCDC197Q8NCU1 MIR23B-201ENST00000384832 97 ntBASIC2.01□□□□□ -2.09
CCDC197Q8NCU1 SNORA26.3-201ENST00000391119 136 ntBASIC2.01□□□□□ -2.09
CCDC197Q8NCU1 AL445529.1-201ENST00000398713 389 ntBASIC2.01□□□□□ -2.09
CCDC197Q8NCU1 AL157709.1-201ENST00000412695 424 ntTSL 3 BASIC2.01□□□□□ -2.09
CCDC197Q8NCU1 EDDM3CP-201ENST00000415977 425 ntBASIC2.01□□□□□ -2.09
CCDC197Q8NCU1 AL137856.1-202ENST00000418238 422 ntTSL 3 BASIC2.01□□□□□ -2.09
CCDC197Q8NCU1 AC093911.1-201ENST00000419129 552 ntTSL 4 BASIC2.01□□□□□ -2.09
CCDC197Q8NCU1 SNRPEP10-201ENST00000420249 274 ntBASIC2.01□□□□□ -2.09
CCDC197Q8NCU1 HMGN2P19-201ENST00000425149 265 ntBASIC2.01□□□□□ -2.09
CCDC197Q8NCU1 AC078809.1-201ENST00000427601 140 ntBASIC2.01□□□□□ -2.09
CCDC197Q8NCU1 AL133396.1-201ENST00000432048 687 ntBASIC2.01□□□□□ -2.09
CCDC197Q8NCU1 AC244670.1-201ENST00000436879 112 ntBASIC2.01□□□□□ -2.09
CCDC197Q8NCU1 LINC01691-201ENST00000450546 426 ntTSL 5 BASIC2.01□□□□□ -2.09
CCDC197Q8NCU1 SNRPGP7-201ENST00000469016 106 ntBASIC2.01□□□□□ -2.09
CCDC197Q8NCU1 AC117394.2-201ENST00000487827 323 ntTSL 3 BASIC2.01□□□□□ -2.09
CCDC197Q8NCU1 RN7SL636P-201ENST00000497504 294 ntBASIC2.01□□□□□ -2.09
CCDC197Q8NCU1 AC105389.2-201ENST00000506475 435 ntTSL 3 BASIC2.01□□□□□ -2.09
CCDC197Q8NCU1 AC091874.1-201ENST00000511402 339 ntBASIC2.01□□□□□ -2.09
CCDC197Q8NCU1 AC091887.1-201ENST00000514002 439 ntTSL 5 BASIC2.01□□□□□ -2.09
CCDC197Q8NCU1 SNORA4.4-201ENST00000515921 135 ntBASIC2.01□□□□□ -2.09
CCDC197Q8NCU1 SNORA31.16-201ENST00000516773 139 ntBASIC2.01□□□□□ -2.09
CCDC197Q8NCU1 MIR514B-201ENST00000516774 80 ntBASIC2.01□□□□□ -2.09
CCDC197Q8NCU1 AC104576.1-201ENST00000524225 88 ntBASIC2.01□□□□□ -2.09
CCDC197Q8NCU1 MTND1P35-201ENST00000526739 508 ntBASIC2.01□□□□□ -2.09
CCDC197Q8NCU1 AC118273.2-201ENST00000532092 465 ntBASIC2.01□□□□□ -2.09
CCDC197Q8NCU1 AP000763.2-201ENST00000540641 163 ntBASIC2.01□□□□□ -2.09
CCDC197Q8NCU1 NDUFA5P6-201ENST00000542110 379 ntBASIC2.01□□□□□ -2.09
CCDC197Q8NCU1 AC233702.2-202ENST00000562547 291 ntBASIC2.01□□□□□ -2.09
CCDC197Q8NCU1 MIR4429-201ENST00000580105 73 ntBASIC2.01□□□□□ -2.09
CCDC197Q8NCU1 AC090371.2-202ENST00000582239 644 ntTSL 5 BASIC2.01□□□□□ -2.09
CCDC197Q8NCU1 MIR3136-201ENST00000583498 78 ntBASIC2.01□□□□□ -2.09
CCDC197Q8NCU1 AL512625.3-207ENST00000609749 477 ntTSL 3 BASIC2.01□□□□□ -2.09
CCDC197Q8NCU1 AC068944.2-201ENST00000610373 403 ntBASIC2.01□□□□□ -2.09
CCDC197Q8NCU1 AC008162.2-201ENST00000613352 291 ntAPPRIS P1 TSL 3 BASIC2.01□□□□□ -2.09
CCDC197Q8NCU1 AL161423.1-201ENST00000613700 262 ntBASIC2.01□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 102.4 ms