Protein–RNA interactions for Protein: Q8N3C7

CLIP4, CAP-Gly domain-containing linker protein 4, humanhuman

Predictions only

Length 705 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP4Q8N3C7 RNU1-101P-201ENST00000391171 127 ntBASIC2.67□□□□□ -1.98
CLIP4Q8N3C7 RNU6-985P-201ENST00000410182 104 ntBASIC2.67□□□□□ -1.98
CLIP4Q8N3C7 RNU6-1156P-201ENST00000410365 100 ntBASIC2.67□□□□□ -1.98
CLIP4Q8N3C7 CEP57L1P1-201ENST00000430943 1201 ntBASIC2.67□□□□□ -1.98
CLIP4Q8N3C7 LINC01162-201ENST00000447262 447 ntTSL 5 BASIC2.67□□□□□ -1.98
CLIP4Q8N3C7 MTND5P22-201ENST00000458380 195 ntBASIC2.67□□□□□ -1.98
CLIP4Q8N3C7 RNU7-23P-201ENST00000459465 62 ntBASIC2.67□□□□□ -1.98
CLIP4Q8N3C7 RPS29P27-201ENST00000463711 170 ntBASIC2.67□□□□□ -1.98
CLIP4Q8N3C7 LINC02110-201ENST00000503870 546 ntTSL 3 BASIC2.67□□□□□ -1.98
CLIP4Q8N3C7 AC105758.1-201ENST00000506038 399 ntBASIC2.67□□□□□ -1.98
CLIP4Q8N3C7 SNORA31.18-201ENST00000517043 134 ntBASIC2.67□□□□□ -1.98
CLIP4Q8N3C7 SNORA31.21-201ENST00000517180 77 ntBASIC2.67□□□□□ -1.98
CLIP4Q8N3C7 AC103726.1-201ENST00000520785 474 ntTSL 2 BASIC2.67□□□□□ -1.98
CLIP4Q8N3C7 AC002558.3-201ENST00000574021 401 ntTSL 3 BASIC2.67□□□□□ -1.98
CLIP4Q8N3C7 RPL23AP88-201ENST00000605759 454 ntBASIC2.67□□□□□ -1.98
CLIP4Q8N3C7 AC018692.1-202ENST00000623559 676 ntTSL 5 BASIC2.67□□□□□ -1.98
CLIP4Q8N3C7 AC097372.5-201ENST00000623665 376 ntBASIC2.67□□□□□ -1.98
CLIP4Q8N3C7 GCNT4-201ENST00000322348 5554 ntAPPRIS P1 BASIC2.67□□□□□ -1.98
CLIP4Q8N3C7 MTND5P16-201ENST00000460269 1703 ntBASIC2.67□□□□□ -1.98
CLIP4Q8N3C7 ROCK2-203ENST00000401753 4017 ntTSL 1 (best) BASIC2.67□□□□□ -1.98
CLIP4Q8N3C7 KIAA0825-203ENST00000513200 4942 ntTSL 5 BASIC2.67□□□□□ -1.98
CLIP4Q8N3C7 MTND5P9-201ENST00000503854 1755 ntBASIC2.66□□□□□ -1.98
CLIP4Q8N3C7 KIAA1841-211ENST00000612149 4202 ntTSL 5 BASIC2.66□□□□□ -1.98
CLIP4Q8N3C7 CDC27P3-201ENST00000635418 1910 ntBASIC2.66□□□□□ -1.98
CLIP4Q8N3C7 NOX4-202ENST00000343727 3347 ntTSL 2 BASIC2.66□□□□□ -1.98
CLIP4Q8N3C7 Y_RNA.80-201ENST00000362996 102 ntBASIC2.66□□□□□ -1.98
CLIP4Q8N3C7 RNU6-1280P-201ENST00000365211 107 ntBASIC2.66□□□□□ -1.98
CLIP4Q8N3C7 RNU1-100P-201ENST00000365255 165 ntBASIC2.66□□□□□ -1.98
CLIP4Q8N3C7 Y_RNA.485-201ENST00000384395 102 ntBASIC2.66□□□□□ -1.98
CLIP4Q8N3C7 Y_RNA.527-201ENST00000384573 102 ntBASIC2.66□□□□□ -1.98
CLIP4Q8N3C7 Y_RNA.577-201ENST00000384794 101 ntBASIC2.66□□□□□ -1.98
CLIP4Q8N3C7 DEFB130A-201ENST00000400079 240 ntAPPRIS P1 TSL 1 (best) BASIC2.66□□□□□ -1.98
CLIP4Q8N3C7 AL356057.3-201ENST00000402607 340 ntBASIC2.66□□□□□ -1.98
CLIP4Q8N3C7 AL139095.1-201ENST00000404326 391 ntBASIC2.66□□□□□ -1.98
CLIP4Q8N3C7 SNORA11.1-201ENST00000408133 129 ntBASIC2.66□□□□□ -1.98
CLIP4Q8N3C7 RNU2-23P-201ENST00000410545 195 ntBASIC2.66□□□□□ -1.98
CLIP4Q8N3C7 AL162411.1-201ENST00000413145 526 ntTSL 2 BASIC2.66□□□□□ -1.98
CLIP4Q8N3C7 BPY2DP-201ENST00000422208 265 ntBASIC2.66□□□□□ -1.98
CLIP4Q8N3C7 EIF4EP2-201ENST00000422816 654 ntBASIC2.66□□□□□ -1.98
CLIP4Q8N3C7 AL591043.1-201ENST00000432461 424 ntBASIC2.66□□□□□ -1.98
CLIP4Q8N3C7 DEFB130B-201ENST00000437818 240 ntAPPRIS P1 TSL 1 (best) BASIC2.66□□□□□ -1.98
CLIP4Q8N3C7 PLCB1-IT1-201ENST00000441231 373 ntTSL 3 BASIC2.66□□□□□ -1.98
CLIP4Q8N3C7 AC124916.1-201ENST00000444020 547 ntBASIC2.66□□□□□ -1.98
CLIP4Q8N3C7 RPL27AP5-201ENST00000469428 449 ntBASIC2.66□□□□□ -1.98
CLIP4Q8N3C7 AC034223.1-201ENST00000511054 599 ntTSL 3 BASIC2.66□□□□□ -1.98
CLIP4Q8N3C7 RNU6-581P-201ENST00000516214 105 ntBASIC2.66□□□□□ -1.98
CLIP4Q8N3C7 RRM2B-207ENST00000519962 201 ntTSL 1 (best) BASIC2.66□□□□□ -1.98
CLIP4Q8N3C7 AC107016.2-201ENST00000547968 190 ntBASIC2.66□□□□□ -1.98
CLIP4Q8N3C7 C18orf54-203ENST00000578138 776 ntTSL 3 BASIC2.66□□□□□ -1.98
CLIP4Q8N3C7 MIR5696-201ENST00000578474 85 ntBASIC2.66□□□□□ -1.98
CLIP4Q8N3C7 AC024610.1-201ENST00000582685 323 ntTSL 3 BASIC2.66□□□□□ -1.98
CLIP4Q8N3C7 AC127024.3-201ENST00000582841 460 ntTSL 3 BASIC2.66□□□□□ -1.98
CLIP4Q8N3C7 AC090115.4-201ENST00000609970 188 ntBASIC2.66□□□□□ -1.98
CLIP4Q8N3C7 AC008121.3-201ENST00000618726 433 ntBASIC2.66□□□□□ -1.98
CLIP4Q8N3C7 SMIM2-AS1-204ENST00000619472 746 ntTSL 3 BASIC2.66□□□□□ -1.98
CLIP4Q8N3C7 AL162373.1-201ENST00000620433 407 ntBASIC2.66□□□□□ -1.98
CLIP4Q8N3C7 AC091953.5-201ENST00000622919 233 ntBASIC2.66□□□□□ -1.98
CLIP4Q8N3C7 AL591030.1-201ENST00000626131 627 ntTSL 3 BASIC2.66□□□□□ -1.98
CLIP4Q8N3C7 AP003122.5-201ENST00000527668 3766 ntBASIC2.66□□□□□ -1.98
CLIP4Q8N3C7 CCDC178-213ENST00000583930 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC2.66□□□□□ -1.98
CLIP4Q8N3C7 SCN1A-219ENST00000641575 12874 ntAPPRIS ALT1 BASIC2.66□□□□□ -1.98
CLIP4Q8N3C7 ZNF299P-201ENST00000406845 1804 ntBASIC2.65□□□□□ -1.98
CLIP4Q8N3C7 ARHGAP5-202ENST00000345122 9604 ntAPPRIS P3 TSL 5 BASIC2.65□□□□□ -1.98
CLIP4Q8N3C7 AC005592.1-201ENST00000566527 1640 ntBASIC2.65□□□□□ -1.98
CLIP4Q8N3C7 ZNF626-204ENST00000612591 4404 ntAPPRIS P1 TSL 5 BASIC2.65□□□□□ -1.99
CLIP4Q8N3C7 DLEU2_6.3-201ENST00000340052 136 ntBASIC2.65□□□□□ -1.99
CLIP4Q8N3C7 RNU6-858P-201ENST00000362436 107 ntBASIC2.65□□□□□ -1.99
CLIP4Q8N3C7 SNORD50.1-201ENST00000362987 71 ntBASIC2.65□□□□□ -1.99
CLIP4Q8N3C7 SNORA25.6-201ENST00000364121 118 ntBASIC2.65□□□□□ -1.99
CLIP4Q8N3C7 MIR512-1-201ENST00000384913 84 ntBASIC2.65□□□□□ -1.99
CLIP4Q8N3C7 RPL21P75-201ENST00000396599 483 ntBASIC2.65□□□□□ -1.99
CLIP4Q8N3C7 RPL21P28-201ENST00000401418 483 ntBASIC2.65□□□□□ -1.99
CLIP4Q8N3C7 RNA5SP492-201ENST00000411330 114 ntBASIC2.65□□□□□ -1.99
CLIP4Q8N3C7 SNRPG-202ENST00000413456 398 ntTSL 3 BASIC2.65□□□□□ -1.99
CLIP4Q8N3C7 AC092660.1-201ENST00000420648 371 ntTSL 2 BASIC2.65□□□□□ -1.99
CLIP4Q8N3C7 AL365496.1-201ENST00000426885 215 ntBASIC2.65□□□□□ -1.99
CLIP4Q8N3C7 AL139397.1-201ENST00000430456 644 ntTSL 2 BASIC2.65□□□□□ -1.99
CLIP4Q8N3C7 MTND3P2-201ENST00000438452 342 ntBASIC2.65□□□□□ -1.99
CLIP4Q8N3C7 HMGN2P10-201ENST00000448085 265 ntBASIC2.65□□□□□ -1.99
CLIP4Q8N3C7 SNRPG-205ENST00000449935 428 ntTSL 1 (best) BASIC2.65□□□□□ -1.99
CLIP4Q8N3C7 ITCH-AS1-201ENST00000454205 299 ntTSL 5 BASIC2.65□□□□□ -1.99
CLIP4Q8N3C7 RPL21P39-201ENST00000463605 483 ntBASIC2.65□□□□□ -1.99
CLIP4Q8N3C7 AC087190.1-201ENST00000484462 480 ntBASIC2.65□□□□□ -1.99
CLIP4Q8N3C7 AC093591.1-201ENST00000491435 481 ntBASIC2.65□□□□□ -1.99
CLIP4Q8N3C7 AC015911.1-201ENST00000495111 156 ntBASIC2.65□□□□□ -1.99
CLIP4Q8N3C7 RPL21P16-201ENST00000495531 483 ntBASIC2.65□□□□□ -1.99
CLIP4Q8N3C7 AC021146.2-201ENST00000504736 556 ntBASIC2.65□□□□□ -1.99
CLIP4Q8N3C7 AC116655.1-201ENST00000508324 901 ntBASIC2.65□□□□□ -1.99
CLIP4Q8N3C7 RNU6-764P-201ENST00000516396 105 ntBASIC2.65□□□□□ -1.99
CLIP4Q8N3C7 RNU4-77P-201ENST00000516692 156 ntBASIC2.65□□□□□ -1.99
CLIP4Q8N3C7 RNU6-56P-201ENST00000516986 93 ntBASIC2.65□□□□□ -1.99
CLIP4Q8N3C7 AP000889.1-201ENST00000530968 660 ntBASIC2.65□□□□□ -1.99
CLIP4Q8N3C7 AC012229.1-201ENST00000558699 499 ntTSL 4 BASIC2.65□□□□□ -1.99
CLIP4Q8N3C7 AC021739.1-201ENST00000559631 174 ntBASIC2.65□□□□□ -1.99
CLIP4Q8N3C7 MIR3670-2-201ENST00000582974 65 ntBASIC2.65□□□□□ -1.99
CLIP4Q8N3C7 MIR3670-1-201ENST00000584160 65 ntBASIC2.65□□□□□ -1.99
CLIP4Q8N3C7 MIR3670-3-201ENST00000584855 65 ntBASIC2.65□□□□□ -1.99
CLIP4Q8N3C7 VN1R107P-201ENST00000601784 209 ntBASIC2.65□□□□□ -1.99
CLIP4Q8N3C7 AC104695.3-201ENST00000604052 296 ntBASIC2.65□□□□□ -1.99
CLIP4Q8N3C7 AC007179.3-201ENST00000604976 235 ntBASIC2.65□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 129.7 ms