Protein–RNA interactions for Protein: Q86UA1

PRPF39, Pre-mRNA-processing factor 39, humanhuman

Known RBP Predictions only

Length 669 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39Q86UA1 AC022202.1-201ENST00000613515 211 ntBASIC2.4□□□□□ -2.03
PRPF39Q86UA1 AL160394.1-201ENST00000624765 724 ntBASIC2.4□□□□□ -2.03
PRPF39Q86UA1 SNORD98-201ENST00000636377 67 ntBASIC2.4□□□□□ -2.03
PRPF39Q86UA1 AC099654.12-201ENST00000639868 649 ntBASIC2.4□□□□□ -2.03
PRPF39Q86UA1 RNU6-944P-201ENST00000364023 107 ntBASIC2.39□□□□□ -2.03
PRPF39Q86UA1 Y_RNA.372-201ENST00000365599 102 ntBASIC2.39□□□□□ -2.03
PRPF39Q86UA1 SNORD73A-201ENST00000386062 65 ntBASIC2.39□□□□□ -2.03
PRPF39Q86UA1 AL590135.1-201ENST00000422215 156 ntBASIC2.39□□□□□ -2.03
PRPF39Q86UA1 AC019205.3-201ENST00000424573 156 ntBASIC2.39□□□□□ -2.03
PRPF39Q86UA1 USP9YP18-201ENST00000425912 695 ntBASIC2.39□□□□□ -2.03
PRPF39Q86UA1 AC016700.2-201ENST00000446011 156 ntBASIC2.39□□□□□ -2.03
PRPF39Q86UA1 AL136987.2-201ENST00000457321 684 ntTSL 3 BASIC2.39□□□□□ -2.03
PRPF39Q86UA1 AC018868.1-201ENST00000491307 315 ntBASIC2.39□□□□□ -2.03
PRPF39Q86UA1 AC015911.1-201ENST00000495111 156 ntBASIC2.39□□□□□ -2.03
PRPF39Q86UA1 Y_RNA.654-201ENST00000497848 106 ntBASIC2.39□□□□□ -2.03
PRPF39Q86UA1 AC022447.4-201ENST00000504053 364 ntBASIC2.39□□□□□ -2.03
PRPF39Q86UA1 SNORA19.2-201ENST00000516013 114 ntBASIC2.39□□□□□ -2.03
PRPF39Q86UA1 RNU6-506P-201ENST00000516553 94 ntBASIC2.39□□□□□ -2.03
PRPF39Q86UA1 RNU6-835P-201ENST00000516974 104 ntBASIC2.39□□□□□ -2.03
PRPF39Q86UA1 AC087854.1-201ENST00000519706 414 ntBASIC2.39□□□□□ -2.03
PRPF39Q86UA1 AC107953.1-201ENST00000522216 297 ntBASIC2.39□□□□□ -2.03
PRPF39Q86UA1 AP002884.4-201ENST00000527589 594 ntTSL 3 BASIC2.39□□□□□ -2.03
PRPF39Q86UA1 AC007375.1-201ENST00000554513 578 ntBASIC2.39□□□□□ -2.03
PRPF39Q86UA1 AL133279.1-202ENST00000556789 456 ntTSL 5 BASIC2.39□□□□□ -2.03
PRPF39Q86UA1 HMGB1P33-201ENST00000563485 527 ntBASIC2.39□□□□□ -2.03
PRPF39Q86UA1 ZNF788-206ENST00000596883 692 ntTSL 3 BASIC2.39□□□□□ -2.03
PRPF39Q86UA1 AL162413.1-201ENST00000603198 110 ntBASIC2.39□□□□□ -2.03
PRPF39Q86UA1 AL034555.1-201ENST00000604816 211 ntBASIC2.39□□□□□ -2.03
PRPF39Q86UA1 AC103705.1-201ENST00000619013 241 ntBASIC2.39□□□□□ -2.03
PRPF39Q86UA1 YWHAEP7-203ENST00000622054 312 ntBASIC2.39□□□□□ -2.03
PRPF39Q86UA1 LIFR-201ENST00000263409 10089 ntAPPRIS P1 TSL 1 (best) BASIC2.39□□□□□ -2.03
PRPF39Q86UA1 AC003984.1-201ENST00000450977 4104 ntTSL 1 (best) BASIC2.39□□□□□ -2.03
PRPF39Q86UA1 CHORDC1-205ENST00000529726 4805 ntTSL 2 BASIC2.38□□□□□ -2.03
PRPF39Q86UA1 RNU6-1285P-201ENST00000363480 105 ntBASIC2.38□□□□□ -2.03
PRPF39Q86UA1 RNU6-743P-201ENST00000364151 106 ntBASIC2.38□□□□□ -2.03
PRPF39Q86UA1 RNU4-40P-201ENST00000364351 143 ntBASIC2.38□□□□□ -2.03
PRPF39Q86UA1 RNU4-20P-201ENST00000365601 151 ntBASIC2.38□□□□□ -2.03
PRPF39Q86UA1 MIR144-201ENST00000384886 86 ntBASIC2.38□□□□□ -2.03
PRPF39Q86UA1 TRAV40-201ENST00000390467 317 ntAPPRIS P1 BASIC2.38□□□□□ -2.03
PRPF39Q86UA1 DPH3P2-201ENST00000422618 250 ntBASIC2.38□□□□□ -2.03
PRPF39Q86UA1 AC055764.1-201ENST00000454526 473 ntTSL 3 BASIC2.38□□□□□ -2.03
PRPF39Q86UA1 AC107032.1-201ENST00000485945 480 ntBASIC2.38□□□□□ -2.03
PRPF39Q86UA1 HMGB1P35-201ENST00000503360 598 ntBASIC2.38□□□□□ -2.03
PRPF39Q86UA1 AC107222.1-201ENST00000510899 637 ntBASIC2.38□□□□□ -2.03
PRPF39Q86UA1 LINC02100-201ENST00000512978 238 ntTSL 3 BASIC2.38□□□□□ -2.03
PRPF39Q86UA1 RNA5SP281-201ENST00000516504 135 ntBASIC2.38□□□□□ -2.03
PRPF39Q86UA1 AP003465.1-201ENST00000520575 382 ntTSL 2 BASIC2.38□□□□□ -2.03
PRPF39Q86UA1 AC022616.8-201ENST00000533569 253 ntBASIC2.38□□□□□ -2.03
PRPF39Q86UA1 AC025423.5-201ENST00000550230 219 ntBASIC2.38□□□□□ -2.03
PRPF39Q86UA1 AL118558.2-201ENST00000556294 238 ntBASIC2.38□□□□□ -2.03
PRPF39Q86UA1 AC025043.1-201ENST00000558047 625 ntTSL 2 BASIC2.38□□□□□ -2.03
PRPF39Q86UA1 MIR3136-201ENST00000583498 78 ntBASIC2.38□□□□□ -2.03
PRPF39Q86UA1 AC022335.1-204ENST00000590779 600 ntAPPRIS ALT2 TSL 2 BASIC2.38□□□□□ -2.03
PRPF39Q86UA1 SNRPGP17-201ENST00000603780 214 ntBASIC2.38□□□□□ -2.03
PRPF39Q86UA1 LINC02112-205ENST00000606744 236 ntTSL 1 (best) BASIC2.38□□□□□ -2.03
PRPF39Q86UA1 AC092807.2-201ENST00000609367 243 ntBASIC2.38□□□□□ -2.03
PRPF39Q86UA1 SNORD115-3-201ENST00000363100 82 ntBASIC2.37□□□□□ -2.03
PRPF39Q86UA1 RNU6-780P-201ENST00000391030 104 ntBASIC2.37□□□□□ -2.03
PRPF39Q86UA1 AL590002.1-201ENST00000406554 418 ntBASIC2.37□□□□□ -2.03
PRPF39Q86UA1 RNU6-648P-201ENST00000410190 107 ntBASIC2.37□□□□□ -2.03
PRPF39Q86UA1 LINC01707-201ENST00000425517 627 ntTSL 3 BASIC2.37□□□□□ -2.03
PRPF39Q86UA1 AL139415.2-201ENST00000431968 163 ntBASIC2.37□□□□□ -2.03
PRPF39Q86UA1 AC018634.1-201ENST00000437554 401 ntBASIC2.37□□□□□ -2.03
PRPF39Q86UA1 LINC01549-201ENST00000440664 714 ntTSL 3 BASIC2.37□□□□□ -2.03
PRPF39Q86UA1 AC073325.1-201ENST00000443714 542 ntTSL 4 BASIC2.37□□□□□ -2.03
PRPF39Q86UA1 MAMDC2-AS1-205ENST00000451488 317 ntTSL 3 BASIC2.37□□□□□ -2.03
PRPF39Q86UA1 AL137159.1-201ENST00000452808 512 ntBASIC2.37□□□□□ -2.03
PRPF39Q86UA1 AC117394.2-201ENST00000487827 323 ntTSL 3 BASIC2.37□□□□□ -2.03
PRPF39Q86UA1 AC019235.1-201ENST00000503847 207 ntBASIC2.37□□□□□ -2.03
PRPF39Q86UA1 AC107208.1-201ENST00000508265 519 ntTSL 4 BASIC2.37□□□□□ -2.03
PRPF39Q86UA1 RNA5SP137-201ENST00000516833 135 ntBASIC2.37□□□□□ -2.03
PRPF39Q86UA1 SNORD60.2-201ENST00000516883 86 ntBASIC2.37□□□□□ -2.03
PRPF39Q86UA1 AC090568.2-205ENST00000518631 576 ntTSL 4 BASIC2.37□□□□□ -2.03
PRPF39Q86UA1 IGHVIII-5-1-201ENST00000523059 99 ntBASIC2.37□□□□□ -2.03
PRPF39Q86UA1 NDUFA5P6-201ENST00000542110 379 ntBASIC2.37□□□□□ -2.03
PRPF39Q86UA1 MIR4529-201ENST00000578110 78 ntBASIC2.37□□□□□ -2.03
PRPF39Q86UA1 MIR4648-201ENST00000580107 72 ntBASIC2.37□□□□□ -2.03
PRPF39Q86UA1 RBBP8-210ENST00000581687 617 ntTSL 2 BASIC2.37□□□□□ -2.03
PRPF39Q86UA1 AC007229.1-201ENST00000590455 412 ntBASIC2.37□□□□□ -2.03
PRPF39Q86UA1 AC009314.1-201ENST00000603871 304 ntBASIC2.37□□□□□ -2.03
PRPF39Q86UA1 AL356157.2-201ENST00000605122 111 ntBASIC2.37□□□□□ -2.03
PRPF39Q86UA1 AL121757.2-201ENST00000611223 313 ntBASIC2.37□□□□□ -2.03
PRPF39Q86UA1 ENAM-201ENST00000396073 5679 ntAPPRIS P1 TSL 1 (best) BASIC2.37□□□□□ -2.03
PRPF39Q86UA1 AP000560.1-201ENST00000624150 1937 ntBASIC2.36□□□□□ -2.03
PRPF39Q86UA1 CCDC148-202ENST00000409187 2523 ntAPPRIS P1 TSL 5 BASIC2.36□□□□□ -2.03
PRPF39Q86UA1 MUC15-202ENST00000436318 3118 ntTSL 5 BASIC2.36□□□□□ -2.03
PRPF39Q86UA1 OR4G1P-203ENST00000641984 1631 ntBASIC2.36□□□□□ -2.03
PRPF39Q86UA1 SLITRK6-201ENST00000400286 4318 ntAPPRIS P1 TSL 1 (best) BASIC2.36□□□□□ -2.03
PRPF39Q86UA1 KPNA5-202ENST00000368564 11311 ntAPPRIS P1 TSL 1 (best) BASIC2.36□□□□□ -2.03
PRPF39Q86UA1 Y_RNA.318-201ENST00000365131 97 ntBASIC2.36□□□□□ -2.03
PRPF39Q86UA1 RNU6-483P-201ENST00000384088 108 ntBASIC2.36□□□□□ -2.03
PRPF39Q86UA1 BTF3L4P2-201ENST00000392798 346 ntBASIC2.36□□□□□ -2.03
PRPF39Q86UA1 RNU6-1068P-201ENST00000410958 103 ntBASIC2.36□□□□□ -2.03
PRPF39Q86UA1 SNAP23P1-201ENST00000433229 246 ntBASIC2.36□□□□□ -2.03
PRPF39Q86UA1 MTCO2P3-201ENST00000442543 421 ntBASIC2.36□□□□□ -2.03
PRPF39Q86UA1 AC010095.1-201ENST00000443543 144 ntBASIC2.36□□□□□ -2.03
PRPF39Q86UA1 AC092567.1-201ENST00000452397 251 ntTSL 3 BASIC2.36□□□□□ -2.03
PRPF39Q86UA1 LINC01774-201ENST00000453569 595 ntTSL 2 BASIC2.36□□□□□ -2.03
PRPF39Q86UA1 RNU6-1037P-201ENST00000459571 107 ntBASIC2.36□□□□□ -2.03
PRPF39Q86UA1 RNU6-1208P-201ENST00000459588 107 ntBASIC2.36□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 143.2 ms