Protein–RNA interactions for Protein: Q86U70

LDB1, LIM domain-binding protein 1, humanhuman

Predicted RBP Predictions only

Length 411 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDB1Q86U70 AC019155.3-201ENST00000454957 600 ntTSL 2 BASIC2.41□□□□□ -2.02
LDB1Q86U70 U8.21-201ENST00000459536 136 ntBASIC2.41□□□□□ -2.02
LDB1Q86U70 RPL9P9-202ENST00000466501 579 ntBASIC2.41□□□□□ -2.02
LDB1Q86U70 UBE2DNL-203ENST00000474922 222 ntBASIC2.41□□□□□ -2.02
LDB1Q86U70 AC099520.1-202ENST00000503650 777 ntTSL 3 BASIC2.41□□□□□ -2.02
LDB1Q86U70 AC023866.1-201ENST00000518064 579 ntTSL 4 BASIC2.41□□□□□ -2.02
LDB1Q86U70 AC083973.1-205ENST00000518994 601 ntTSL 2 BASIC2.41□□□□□ -2.02
LDB1Q86U70 SCOCP1-201ENST00000554676 349 ntBASIC2.41□□□□□ -2.02
LDB1Q86U70 CERS3-AS1-201ENST00000560643 372 ntTSL 3 BASIC2.41□□□□□ -2.02
LDB1Q86U70 AC009120.5-201ENST00000561669 475 ntTSL 5 BASIC2.41□□□□□ -2.02
LDB1Q86U70 AC093249.1-201ENST00000567049 203 ntBASIC2.41□□□□□ -2.02
LDB1Q86U70 AP005057.1-201ENST00000583827 574 ntTSL 4 BASIC2.41□□□□□ -2.02
LDB1Q86U70 AC018638.8-201ENST00000588755 281 ntBASIC2.41□□□□□ -2.02
LDB1Q86U70 AC104237.2-201ENST00000612456 443 ntBASIC2.41□□□□□ -2.02
LDB1Q86U70 AC093913.1-201ENST00000614178 329 ntBASIC2.41□□□□□ -2.02
LDB1Q86U70 AC008121.3-201ENST00000618726 433 ntBASIC2.41□□□□□ -2.02
LDB1Q86U70 U4.3-201ENST00000621047 82 ntBASIC2.41□□□□□ -2.02
LDB1Q86U70 AC009033.1-201ENST00000624279 431 ntBASIC2.41□□□□□ -2.02
LDB1Q86U70 FO624990.1-201ENST00000636373 85 ntBASIC2.41□□□□□ -2.02
LDB1Q86U70 ZNF117-204ENST00000620222 5317 ntAPPRIS P1 TSL 1 (best) BASIC2.4□□□□□ -2.02
LDB1Q86U70 NEB-203ENST00000397345 26202 ntAPPRIS ALT2 TSL 5 BASIC2.4□□□□□ -2.02
LDB1Q86U70 NEB-209ENST00000427231 26202 ntAPPRIS ALT2 TSL 5 BASIC2.4□□□□□ -2.02
LDB1Q86U70 SNORD32A-201ENST00000364805 84 ntBASIC2.4□□□□□ -2.03
LDB1Q86U70 AP000275.1-201ENST00000411943 390 ntBASIC2.4□□□□□ -2.03
LDB1Q86U70 AC078809.1-201ENST00000427601 140 ntBASIC2.4□□□□□ -2.03
LDB1Q86U70 SUMO1P4-201ENST00000429430 302 ntBASIC2.4□□□□□ -2.03
LDB1Q86U70 USP9YP8-201ENST00000441913 500 ntBASIC2.4□□□□□ -2.03
LDB1Q86U70 AL031659.1-201ENST00000447075 539 ntBASIC2.4□□□□□ -2.03
LDB1Q86U70 AMD1P1-201ENST00000457220 922 ntBASIC2.4□□□□□ -2.03
LDB1Q86U70 SNRPGP7-201ENST00000469016 106 ntBASIC2.4□□□□□ -2.03
LDB1Q86U70 AC113383.1-204ENST00000507060 552 ntTSL 3 BASIC2.4□□□□□ -2.03
LDB1Q86U70 RNU6-612P-201ENST00000516909 102 ntBASIC2.4□□□□□ -2.03
LDB1Q86U70 AC099518.4-202ENST00000576433 455 ntTSL 2 BASIC2.4□□□□□ -2.03
LDB1Q86U70 AC060780.3-201ENST00000589464 80 ntBASIC2.4□□□□□ -2.03
LDB1Q86U70 AL670379.2-201ENST00000604983 252 ntBASIC2.4□□□□□ -2.03
LDB1Q86U70 BNIP3P10-201ENST00000605360 577 ntBASIC2.4□□□□□ -2.03
LDB1Q86U70 AL138726.1-201ENST00000614873 333 ntBASIC2.4□□□□□ -2.03
LDB1Q86U70 HMGB1P24-202ENST00000615653 685 ntBASIC2.4□□□□□ -2.03
LDB1Q86U70 AL160287.1-202ENST00000638113 454 ntTSL 5 BASIC2.4□□□□□ -2.03
LDB1Q86U70 AGL-204ENST00000370161 6923 ntTSL 5 BASIC2.4□□□□□ -2.03
LDB1Q86U70 TLK1-206ENST00000434911 2156 ntTSL 2 BASIC2.4□□□□□ -2.03
LDB1Q86U70 ARHGAP15-202ENST00000409869 2968 ntTSL 5 BASIC2.4□□□□□ -2.03
LDB1Q86U70 CYSLTR1-203ENST00000614798 2681 ntAPPRIS P1 TSL 1 (best) BASIC2.39□□□□□ -2.03
LDB1Q86U70 AP000560.1-201ENST00000624150 1937 ntBASIC2.39□□□□□ -2.03
LDB1Q86U70 Y_RNA.86-201ENST00000363020 111 ntBASIC2.39□□□□□ -2.03
LDB1Q86U70 SNORA38-201ENST00000363946 132 ntBASIC2.39□□□□□ -2.03
LDB1Q86U70 SNORA32.2-201ENST00000384049 122 ntBASIC2.39□□□□□ -2.03
LDB1Q86U70 MIR95-201ENST00000385072 81 ntBASIC2.39□□□□□ -2.03
LDB1Q86U70 AL359511.1-201ENST00000402970 211 ntBASIC2.39□□□□□ -2.03
LDB1Q86U70 RNU6-1148P-201ENST00000410992 104 ntBASIC2.39□□□□□ -2.03
LDB1Q86U70 AL592435.1-201ENST00000416401 469 ntTSL 3 BASIC2.39□□□□□ -2.03
LDB1Q86U70 RPL23AP95-201ENST00000426806 265 ntBASIC2.39□□□□□ -2.03
LDB1Q86U70 MTND1P2-201ENST00000430604 821 ntBASIC2.39□□□□□ -2.03
LDB1Q86U70 AL645568.3-201ENST00000433683 316 ntBASIC2.39□□□□□ -2.03
LDB1Q86U70 AC244670.1-201ENST00000436879 112 ntBASIC2.39□□□□□ -2.03
LDB1Q86U70 RPL32P28-201ENST00000443577 397 ntBASIC2.39□□□□□ -2.03
LDB1Q86U70 AC114801.2-201ENST00000503825 781 ntBASIC2.39□□□□□ -2.03
LDB1Q86U70 AC022447.4-201ENST00000504053 364 ntBASIC2.39□□□□□ -2.03
LDB1Q86U70 AC096745.1-201ENST00000509945 370 ntBASIC2.39□□□□□ -2.03
LDB1Q86U70 AC026436.1-201ENST00000510537 270 ntBASIC2.39□□□□□ -2.03
LDB1Q86U70 RPL39P5-202ENST00000512505 151 ntBASIC2.39□□□□□ -2.03
LDB1Q86U70 RNU5F-2P-201ENST00000516066 82 ntBASIC2.39□□□□□ -2.03
LDB1Q86U70 RN7SKP256-201ENST00000517201 314 ntBASIC2.39□□□□□ -2.03
LDB1Q86U70 AP000889.2-201ENST00000532684 490 ntBASIC2.39□□□□□ -2.03
LDB1Q86U70 AC096558.1-203ENST00000550516 574 ntTSL 3 BASIC2.39□□□□□ -2.03
LDB1Q86U70 IMMP1LP2-201ENST00000552954 492 ntBASIC2.39□□□□□ -2.03
LDB1Q86U70 MIR3672-201ENST00000584290 82 ntBASIC2.39□□□□□ -2.03
LDB1Q86U70 AL355297.2-201ENST00000604792 129 ntBASIC2.39□□□□□ -2.03
LDB1Q86U70 AL512625.3-207ENST00000609749 477 ntTSL 3 BASIC2.39□□□□□ -2.03
LDB1Q86U70 AC046143.2-201ENST00000609789 160 ntBASIC2.39□□□□□ -2.03
LDB1Q86U70 AC068944.2-201ENST00000610373 403 ntBASIC2.39□□□□□ -2.03
LDB1Q86U70 KCNQ1OT1_3.1-201ENST00000616504 116 ntBASIC2.39□□□□□ -2.03
LDB1Q86U70 AL136221.1-201ENST00000621449 509 ntBASIC2.39□□□□□ -2.03
LDB1Q86U70 RTL4-201ENST00000340433 2613 ntAPPRIS P1 BASIC2.38□□□□□ -2.03
LDB1Q86U70 MIR6073-201ENST00000352083 89 ntBASIC2.38□□□□□ -2.03
LDB1Q86U70 RNU6-227P-201ENST00000362865 103 ntBASIC2.38□□□□□ -2.03
LDB1Q86U70 RNU6-1317P-201ENST00000364582 104 ntBASIC2.38□□□□□ -2.03
LDB1Q86U70 RNU6-1013P-201ENST00000384180 107 ntBASIC2.38□□□□□ -2.03
LDB1Q86U70 SNORA41-201ENST00000384675 132 ntBASIC2.38□□□□□ -2.03
LDB1Q86U70 BTF3L4P2-201ENST00000392798 346 ntBASIC2.38□□□□□ -2.03
LDB1Q86U70 RN7SKP61-201ENST00000410642 295 ntBASIC2.38□□□□□ -2.03
LDB1Q86U70 RNU6-325P-201ENST00000411132 105 ntBASIC2.38□□□□□ -2.03
LDB1Q86U70 AL030996.1-201ENST00000411430 235 ntBASIC2.38□□□□□ -2.03
LDB1Q86U70 RPL30P16-201ENST00000419341 429 ntBASIC2.38□□□□□ -2.03
LDB1Q86U70 LINC02559-201ENST00000420391 188 ntTSL 2 BASIC2.38□□□□□ -2.03
LDB1Q86U70 AC093151.3-203ENST00000422305 514 ntTSL 3 BASIC2.38□□□□□ -2.03
LDB1Q86U70 MTCO1P29-201ENST00000496868 288 ntBASIC2.38□□□□□ -2.03
LDB1Q86U70 AC025465.4-201ENST00000513422 638 ntBASIC2.38□□□□□ -2.03
LDB1Q86U70 RNU6-864P-201ENST00000516256 108 ntBASIC2.38□□□□□ -2.03
LDB1Q86U70 RNU6-586P-201ENST00000517265 104 ntBASIC2.38□□□□□ -2.03
LDB1Q86U70 HSPE1P4-201ENST00000550617 308 ntBASIC2.38□□□□□ -2.03
LDB1Q86U70 AC023906.2-201ENST00000558343 462 ntTSL 3 BASIC2.38□□□□□ -2.03
LDB1Q86U70 MIR3136-201ENST00000583498 78 ntBASIC2.38□□□□□ -2.03
LDB1Q86U70 AC023043.2-201ENST00000589678 1026 ntBASIC2.38□□□□□ -2.03
LDB1Q86U70 AL137847.3-201ENST00000611521 109 ntBASIC2.38□□□□□ -2.03
LDB1Q86U70 AC090517.3-201ENST00000625170 141 ntBASIC2.38□□□□□ -2.03
LDB1Q86U70 Clostridiales-1.2-201ENST00000636724 160 ntBASIC2.38□□□□□ -2.03
LDB1Q86U70 TAB3-205ENST00000378933 6671 ntAPPRIS P1 TSL 1 (best) BASIC2.38□□□□□ -2.03
LDB1Q86U70 DNAH7-201ENST00000312428 12394 ntAPPRIS P1 TSL 1 (best) BASIC2.37□□□□□ -2.03
LDB1Q86U70 SKIL-203ENST00000426052 2757 ntTSL 2 BASIC2.37□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 119.3 ms