Protein–RNA interactions for Protein: Q6ZW05

PTCHD4, Patched domain-containing protein 4, humanhuman

Predictions only

Length 846 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD4Q6ZW05 AL365496.1-201ENST00000426885 215 ntBASIC2.93□□□□□ -1.94
PTCHD4Q6ZW05 AC007566.1-201ENST00000427458 643 ntTSL 5 BASIC2.93□□□□□ -1.94
PTCHD4Q6ZW05 AL117341.1-201ENST00000437213 373 ntTSL 5 BASIC2.93□□□□□ -1.94
PTCHD4Q6ZW05 RPL21P2-201ENST00000440049 481 ntBASIC2.93□□□□□ -1.94
PTCHD4Q6ZW05 AL442638.1-201ENST00000443359 237 ntTSL 5 BASIC2.93□□□□□ -1.94
PTCHD4Q6ZW05 AL353705.4-201ENST00000449661 238 ntBASIC2.93□□□□□ -1.94
PTCHD4Q6ZW05 OR2AQ1P-201ENST00000451972 200 ntBASIC2.93□□□□□ -1.94
PTCHD4Q6ZW05 AC112492.4-201ENST00000456549 352 ntBASIC2.93□□□□□ -1.94
PTCHD4Q6ZW05 LINC01256-201ENST00000513270 508 ntTSL 2 BASIC2.93□□□□□ -1.94
PTCHD4Q6ZW05 AC144568.1-201ENST00000520139 137 ntBASIC2.93□□□□□ -1.94
PTCHD4Q6ZW05 AC022039.1-201ENST00000527110 488 ntTSL 2 BASIC2.93□□□□□ -1.94
PTCHD4Q6ZW05 LINC02309-201ENST00000553679 207 ntTSL 3 BASIC2.93□□□□□ -1.94
PTCHD4Q6ZW05 AC025271.3-201ENST00000563031 255 ntTSL 5 BASIC2.93□□□□□ -1.94
PTCHD4Q6ZW05 AC007347.1-201ENST00000563879 281 ntTSL 3 BASIC2.93□□□□□ -1.94
PTCHD4Q6ZW05 AC025281.1-201ENST00000567026 265 ntBASIC2.93□□□□□ -1.94
PTCHD4Q6ZW05 AC006600.1-201ENST00000572529 153 ntBASIC2.93□□□□□ -1.94
PTCHD4Q6ZW05 AC006130.2-201ENST00000586202 326 ntBASIC2.93□□□□□ -1.94
PTCHD4Q6ZW05 LINC01482-203ENST00000589610 468 ntTSL 3 BASIC2.93□□□□□ -1.94
PTCHD4Q6ZW05 7SK.7-201ENST00000603504 247 ntBASIC2.93□□□□□ -1.94
PTCHD4Q6ZW05 AL132822.1-201ENST00000617063 513 ntBASIC2.93□□□□□ -1.94
PTCHD4Q6ZW05 SMAD5-AS1_2.1-201ENST00000617906 131 ntBASIC2.93□□□□□ -1.94
PTCHD4Q6ZW05 CDKN2B-AS.1-201ENST00000617921 150 ntBASIC2.93□□□□□ -1.94
PTCHD4Q6ZW05 SNORA43.4-201ENST00000629559 138 ntBASIC2.93□□□□□ -1.94
PTCHD4Q6ZW05 RASA1-202ENST00000456692 3776 ntAPPRIS ALT2 TSL 1 (best) BASIC2.93□□□□□ -1.94
PTCHD4Q6ZW05 LUZP4-201ENST00000371920 1701 ntAPPRIS P2 TSL 1 (best) BASIC2.93□□□□□ -1.94
PTCHD4Q6ZW05 ELF1-201ENST00000239882 3566 ntAPPRIS P1 TSL 1 (best) BASIC2.92□□□□□ -1.94
PTCHD4Q6ZW05 HDX-206ENST00000506585 6158 ntTSL 2 BASIC2.92□□□□□ -1.94
PTCHD4Q6ZW05 AL353743.1-202ENST00000431724 1695 ntBASIC2.92□□□□□ -1.94
PTCHD4Q6ZW05 RHOT1-204ENST00000394692 2960 ntTSL 2 BASIC2.92□□□□□ -1.94
PTCHD4Q6ZW05 RNU6-1309P-201ENST00000363305 108 ntBASIC2.92□□□□□ -1.94
PTCHD4Q6ZW05 SNORA51.4-201ENST00000364993 124 ntBASIC2.92□□□□□ -1.94
PTCHD4Q6ZW05 RNU6-487P-201ENST00000365430 104 ntBASIC2.92□□□□□ -1.94
PTCHD4Q6ZW05 RNU6-1286P-201ENST00000383871 107 ntBASIC2.92□□□□□ -1.94
PTCHD4Q6ZW05 Y_RNA.455-201ENST00000384230 98 ntBASIC2.92□□□□□ -1.94
PTCHD4Q6ZW05 Y_RNA.504-201ENST00000384481 104 ntBASIC2.92□□□□□ -1.94
PTCHD4Q6ZW05 RNU6-748P-201ENST00000384648 107 ntBASIC2.92□□□□□ -1.94
PTCHD4Q6ZW05 RNU6-1105P-201ENST00000384774 107 ntBASIC2.92□□□□□ -1.94
PTCHD4Q6ZW05 MIR554-201ENST00000384874 96 ntBASIC2.92□□□□□ -1.94
PTCHD4Q6ZW05 RNA5SP390-201ENST00000410191 113 ntBASIC2.92□□□□□ -1.94
PTCHD4Q6ZW05 AC096649.2-201ENST00000416186 393 ntBASIC2.92□□□□□ -1.94
PTCHD4Q6ZW05 AL359195.1-201ENST00000416657 339 ntTSL 3 BASIC2.92□□□□□ -1.94
PTCHD4Q6ZW05 AC090617.2-201ENST00000433167 404 ntTSL 3 BASIC2.92□□□□□ -1.94
PTCHD4Q6ZW05 RPL39P29-201ENST00000447779 157 ntBASIC2.92□□□□□ -1.94
PTCHD4Q6ZW05 AC121764.3-201ENST00000465946 384 ntTSL 2 BASIC2.92□□□□□ -1.94
PTCHD4Q6ZW05 MTATP8P1-201ENST00000467115 207 ntBASIC2.92□□□□□ -1.94
PTCHD4Q6ZW05 RPL30P1-201ENST00000488676 339 ntBASIC2.92□□□□□ -1.94
PTCHD4Q6ZW05 RPL23AP75-201ENST00000491601 451 ntBASIC2.92□□□□□ -1.94
PTCHD4Q6ZW05 AC104564.1-201ENST00000493028 407 ntBASIC2.92□□□□□ -1.94
PTCHD4Q6ZW05 AC007536.1-201ENST00000533382 349 ntBASIC2.92□□□□□ -1.94
PTCHD4Q6ZW05 AC007458.1-201ENST00000542812 373 ntBASIC2.92□□□□□ -1.94
PTCHD4Q6ZW05 HSPE1P4-201ENST00000550617 308 ntBASIC2.92□□□□□ -1.94
PTCHD4Q6ZW05 AC104581.2-201ENST00000572227 430 ntBASIC2.92□□□□□ -1.94
PTCHD4Q6ZW05 MIR5188-201ENST00000583467 113 ntBASIC2.92□□□□□ -1.94
PTCHD4Q6ZW05 BX546450.2-201ENST00000602419 435 ntTSL 5 BASIC2.92□□□□□ -1.94
PTCHD4Q6ZW05 AL137843.1-201ENST00000605078 385 ntBASIC2.92□□□□□ -1.94
PTCHD4Q6ZW05 AL356157.2-201ENST00000605122 111 ntBASIC2.92□□□□□ -1.94
PTCHD4Q6ZW05 Z84484.1-202ENST00000612718 60 ntTSL 5 BASIC2.92□□□□□ -1.94
PTCHD4Q6ZW05 AL731566.2-201ENST00000618971 317 ntBASIC2.92□□□□□ -1.94
PTCHD4Q6ZW05 AL078596.1-201ENST00000624856 447 ntBASIC2.92□□□□□ -1.94
PTCHD4Q6ZW05 LINC01684-201ENST00000415182 2176 ntTSL 1 (best) BASIC2.92□□□□□ -1.94
PTCHD4Q6ZW05 P2RY13-201ENST00000325602 2764 ntAPPRIS P1 TSL 1 (best) BASIC2.92□□□□□ -1.94
PTCHD4Q6ZW05 C18orf54-202ENST00000382911 4056 ntTSL 5 BASIC2.92□□□□□ -1.94
PTCHD4Q6ZW05 AL049781.1-201ENST00000623195 3585 ntBASIC2.91□□□□□ -1.94
PTCHD4Q6ZW05 Y_RNA.133-201ENST00000363428 110 ntBASIC2.91□□□□□ -1.94
PTCHD4Q6ZW05 RNU6-1141P-201ENST00000364520 107 ntBASIC2.91□□□□□ -1.94
PTCHD4Q6ZW05 RNU4-9P-201ENST00000364951 139 ntBASIC2.91□□□□□ -1.94
PTCHD4Q6ZW05 Y_RNA.424-201ENST00000384063 103 ntBASIC2.91□□□□□ -1.94
PTCHD4Q6ZW05 RNU6-1222P-201ENST00000384615 107 ntBASIC2.91□□□□□ -1.94
PTCHD4Q6ZW05 SNORA69.1-201ENST00000390904 137 ntBASIC2.91□□□□□ -1.94
PTCHD4Q6ZW05 SNORA26.7-201ENST00000391288 122 ntBASIC2.91□□□□□ -1.94
PTCHD4Q6ZW05 NPS-201ENST00000398023 270 ntAPPRIS P1 TSL 5 BASIC2.91□□□□□ -1.94
PTCHD4Q6ZW05 MTCYBP2-201ENST00000407745 171 ntBASIC2.91□□□□□ -1.94
PTCHD4Q6ZW05 RNU6-101P-201ENST00000410323 104 ntBASIC2.91□□□□□ -1.94
PTCHD4Q6ZW05 BMS1P22-201ENST00000414726 313 ntBASIC2.91□□□□□ -1.94
PTCHD4Q6ZW05 RPS29P4-201ENST00000414733 161 ntBASIC2.91□□□□□ -1.94
PTCHD4Q6ZW05 MS4A4E-203ENST00000425663 350 ntTSL 1 (best) BASIC2.91□□□□□ -1.94
PTCHD4Q6ZW05 AL731684.2-201ENST00000426839 333 ntTSL 5 BASIC2.91□□□□□ -1.94
PTCHD4Q6ZW05 AC091286.1-201ENST00000431233 461 ntBASIC2.91□□□□□ -1.94
PTCHD4Q6ZW05 AC004383.1-201ENST00000438135 289 ntBASIC2.91□□□□□ -1.94
PTCHD4Q6ZW05 AL138900.1-201ENST00000449345 399 ntTSL 3 BASIC2.91□□□□□ -1.94
PTCHD4Q6ZW05 RPS27P26-201ENST00000494583 239 ntBASIC2.91□□□□□ -1.94
PTCHD4Q6ZW05 LINC02146-201ENST00000504244 509 ntTSL 3 BASIC2.91□□□□□ -1.94
PTCHD4Q6ZW05 SEM1P1-201ENST00000506694 209 ntBASIC2.91□□□□□ -1.94
PTCHD4Q6ZW05 RNU7-175P-201ENST00000515915 61 ntBASIC2.91□□□□□ -1.94
PTCHD4Q6ZW05 RNU5B-3P-201ENST00000516601 115 ntBASIC2.91□□□□□ -1.94
PTCHD4Q6ZW05 AC007375.1-201ENST00000554513 578 ntBASIC2.91□□□□□ -1.94
PTCHD4Q6ZW05 AC009120.5-201ENST00000561669 475 ntTSL 5 BASIC2.91□□□□□ -1.94
PTCHD4Q6ZW05 AC120045.1-201ENST00000563502 251 ntTSL 3 BASIC2.91□□□□□ -1.94
PTCHD4Q6ZW05 AC139426.2-201ENST00000568289 251 ntTSL 3 BASIC2.91□□□□□ -1.94
PTCHD4Q6ZW05 AC113195.1-201ENST00000579952 141 ntBASIC2.91□□□□□ -1.94
PTCHD4Q6ZW05 MIR4276-201ENST00000584832 70 ntBASIC2.91□□□□□ -1.94
PTCHD4Q6ZW05 AC010928.2-201ENST00000588017 287 ntBASIC2.91□□□□□ -1.94
PTCHD4Q6ZW05 AL162713.1-201ENST00000604480 262 ntBASIC2.91□□□□□ -1.94
PTCHD4Q6ZW05 AC100812.1-201ENST00000607622 580 ntBASIC2.91□□□□□ -1.94
PTCHD4Q6ZW05 AL359962.2-201ENST00000610044 303 ntTSL 5 BASIC2.91□□□□□ -1.94
PTCHD4Q6ZW05 AL138825.1-201ENST00000618587 192 ntBASIC2.91□□□□□ -1.94
PTCHD4Q6ZW05 AC008121.3-201ENST00000618726 433 ntBASIC2.91□□□□□ -1.94
PTCHD4Q6ZW05 AC104971.4-201ENST00000622763 249 ntTSL 5 BASIC2.91□□□□□ -1.94
PTCHD4Q6ZW05 SCARNA4-201ENST00000629045 128 ntBASIC2.91□□□□□ -1.94
PTCHD4Q6ZW05 TEX41-300ENST00000631048 69 ntTSL 5 BASIC2.91□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 113.6 ms