Protein–RNA interactions for Protein: Q6NUP7

PPP4R4, Serine/threonine-protein phosphatase 4 regulatory subunit 4, humanhuman

Predictions only

Length 873 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R4Q6NUP7 HOXA11-AS1_4.1-201ENST00000620901 233 ntBASIC3.09□□□□□ -1.91
PPP4R4Q6NUP7 AC091903.1-201ENST00000624322 454 ntBASIC3.09□□□□□ -1.91
PPP4R4Q6NUP7 NCBP1-205ENST00000629069 249 ntTSL 5 BASIC3.09□□□□□ -1.91
PPP4R4Q6NUP7 U6.105-201ENST00000637379 88 ntBASIC3.09□□□□□ -1.91
PPP4R4Q6NUP7 TFEC-202ENST00000320239 6605 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.92
PPP4R4Q6NUP7 ARHGAP28-204ENST00000419673 5492 ntAPPRIS P2 TSL 1 (best) BASIC3.09□□□□□ -1.92
PPP4R4Q6NUP7 KIAA1107-202ENST00000636278 4065 ntAPPRIS P1 TSL 5 BASIC3.09□□□□□ -1.92
PPP4R4Q6NUP7 MACC1-205ENST00000589011 2686 ntAPPRIS P1 TSL 5 BASIC3.08□□□□□ -1.92
PPP4R4Q6NUP7 BAZ2B-202ENST00000343439 2364 ntTSL 5 BASIC3.08□□□□□ -1.92
PPP4R4Q6NUP7 GABRG2-221ENST00000639683 3600 ntTSL 5 BASIC3.08□□□□□ -1.92
PPP4R4Q6NUP7 MIR208A-201ENST00000362287 71 ntBASIC3.08□□□□□ -1.92
PPP4R4Q6NUP7 Y_RNA.61-201ENST00000362835 102 ntBASIC3.08□□□□□ -1.92
PPP4R4Q6NUP7 RNU5B-2P-201ENST00000363036 113 ntBASIC3.08□□□□□ -1.92
PPP4R4Q6NUP7 RNA5SP387-201ENST00000364226 106 ntBASIC3.08□□□□□ -1.92
PPP4R4Q6NUP7 RNU6-1032P-201ENST00000384100 107 ntBASIC3.08□□□□□ -1.92
PPP4R4Q6NUP7 RNU6-1297P-201ENST00000384415 104 ntBASIC3.08□□□□□ -1.92
PPP4R4Q6NUP7 Y_RNA.504-201ENST00000384481 104 ntBASIC3.08□□□□□ -1.92
PPP4R4Q6NUP7 RNU6-310P-201ENST00000384655 107 ntBASIC3.08□□□□□ -1.92
PPP4R4Q6NUP7 TRAJ34-201ENST00000390503 58 ntAPPRIS P1 BASIC3.08□□□□□ -1.92
PPP4R4Q6NUP7 SNORD17-201ENST00000390930 237 ntBASIC3.08□□□□□ -1.92
PPP4R4Q6NUP7 RN7SKP111-201ENST00000410349 271 ntBASIC3.08□□□□□ -1.92
PPP4R4Q6NUP7 LINC02559-201ENST00000420391 188 ntTSL 2 BASIC3.08□□□□□ -1.92
PPP4R4Q6NUP7 AF228730.4-201ENST00000421457 183 ntBASIC3.08□□□□□ -1.92
PPP4R4Q6NUP7 AC093151.3-203ENST00000422305 514 ntTSL 3 BASIC3.08□□□□□ -1.92
PPP4R4Q6NUP7 EIF4EP2-201ENST00000422816 654 ntBASIC3.08□□□□□ -1.92
PPP4R4Q6NUP7 AL590999.1-206ENST00000437947 436 ntTSL 3 BASIC3.08□□□□□ -1.92
PPP4R4Q6NUP7 AC005154.1-208ENST00000440438 353 ntTSL 5 BASIC3.08□□□□□ -1.92
PPP4R4Q6NUP7 AL020994.3-201ENST00000449126 274 ntTSL 3 BASIC3.08□□□□□ -1.92
PPP4R4Q6NUP7 AL357873.1-201ENST00000449215 282 ntTSL 3 BASIC3.08□□□□□ -1.92
PPP4R4Q6NUP7 HYDIN2-201ENST00000493714 554 ntTSL 4 BASIC3.08□□□□□ -1.92
PPP4R4Q6NUP7 AC063944.1-201ENST00000496943 295 ntTSL 3 BASIC3.08□□□□□ -1.92
PPP4R4Q6NUP7 HMGB1P35-201ENST00000503360 598 ntBASIC3.08□□□□□ -1.92
PPP4R4Q6NUP7 AC016632.1-201ENST00000503994 196 ntBASIC3.08□□□□□ -1.92
PPP4R4Q6NUP7 AC099499.1-201ENST00000505040 558 ntTSL 3 BASIC3.08□□□□□ -1.92
PPP4R4Q6NUP7 LINC02165-201ENST00000563061 443 ntTSL 3 BASIC3.08□□□□□ -1.92
PPP4R4Q6NUP7 ESRRAP2-204ENST00000606337 280 ntTSL 5 BASIC3.08□□□□□ -1.92
PPP4R4Q6NUP7 RNU6ATAC35P-201ENST00000609276 444 ntBASIC3.08□□□□□ -1.92
PPP4R4Q6NUP7 AC069234.5-201ENST00000611056 416 ntBASIC3.08□□□□□ -1.92
PPP4R4Q6NUP7 AL359198.2-201ENST00000611836 194 ntBASIC3.08□□□□□ -1.92
PPP4R4Q6NUP7 uc_338.1-201ENST00000612113 180 ntBASIC3.08□□□□□ -1.92
PPP4R4Q6NUP7 SNORD98-201ENST00000636377 67 ntBASIC3.08□□□□□ -1.92
PPP4R4Q6NUP7 BCLAF1P1-201ENST00000505813 2752 ntBASIC3.08□□□□□ -1.92
PPP4R4Q6NUP7 OR51A7-202ENST00000641490 2186 ntAPPRIS P1 BASIC3.08□□□□□ -1.92
PPP4R4Q6NUP7 CEP57L1-223ENST00000523787 2522 ntAPPRIS ALT2 TSL 5 BASIC3.08□□□□□ -1.92
PPP4R4Q6NUP7 DEUP1-202ENST00000525646 1920 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
PPP4R4Q6NUP7 TEX9-207ENST00000560582 2005 ntTSL 3 BASIC3.07□□□□□ -1.92
PPP4R4Q6NUP7 AC092268.1-201ENST00000342691 405 ntBASIC3.07□□□□□ -1.92
PPP4R4Q6NUP7 Y_RNA.333-201ENST00000365274 102 ntBASIC3.07□□□□□ -1.92
PPP4R4Q6NUP7 SNORA29-201ENST00000384183 140 ntBASIC3.07□□□□□ -1.92
PPP4R4Q6NUP7 Y_RNA.533-201ENST00000384596 114 ntBASIC3.07□□□□□ -1.92
PPP4R4Q6NUP7 MIR183-201ENST00000384958 110 ntBASIC3.07□□□□□ -1.92
PPP4R4Q6NUP7 RNY4P36-201ENST00000391116 96 ntBASIC3.07□□□□□ -1.92
PPP4R4Q6NUP7 Y_RNA.646-201ENST00000410980 101 ntBASIC3.07□□□□□ -1.92
PPP4R4Q6NUP7 AC243428.1-201ENST00000421099 264 ntBASIC3.07□□□□□ -1.92
PPP4R4Q6NUP7 AC245052.1-201ENST00000426213 410 ntTSL 3 BASIC3.07□□□□□ -1.92
PPP4R4Q6NUP7 MTCO3P10-201ENST00000455912 772 ntBASIC3.07□□□□□ -1.92
PPP4R4Q6NUP7 RPS3P1-201ENST00000456781 192 ntBASIC3.07□□□□□ -1.92
PPP4R4Q6NUP7 SNORD19B-201ENST00000459623 84 ntBASIC3.07□□□□□ -1.92
PPP4R4Q6NUP7 AC117394.2-201ENST00000487827 323 ntTSL 3 BASIC3.07□□□□□ -1.92
PPP4R4Q6NUP7 AF186996.7-201ENST00000492781 209 ntBASIC3.07□□□□□ -1.92
PPP4R4Q6NUP7 CKS1BP2-201ENST00000497342 240 ntBASIC3.07□□□□□ -1.92
PPP4R4Q6NUP7 Y_RNA.718-201ENST00000517110 102 ntBASIC3.07□□□□□ -1.92
PPP4R4Q6NUP7 RNU6-586P-201ENST00000517265 104 ntBASIC3.07□□□□□ -1.92
PPP4R4Q6NUP7 AP001825.1-201ENST00000534275 351 ntTSL 2 BASIC3.07□□□□□ -1.92
PPP4R4Q6NUP7 AC012229.1-201ENST00000558699 499 ntTSL 4 BASIC3.07□□□□□ -1.92
PPP4R4Q6NUP7 MIR3136-201ENST00000583498 78 ntBASIC3.07□□□□□ -1.92
PPP4R4Q6NUP7 MIR4276-201ENST00000584832 70 ntBASIC3.07□□□□□ -1.92
PPP4R4Q6NUP7 AL355297.2-201ENST00000604792 129 ntBASIC3.07□□□□□ -1.92
PPP4R4Q6NUP7 AL034555.1-201ENST00000604816 211 ntBASIC3.07□□□□□ -1.92
PPP4R4Q6NUP7 PHF6-205ENST00000625464 4434 ntAPPRIS ALT1 TSL 5 BASIC3.07□□□□□ -1.92
PPP4R4Q6NUP7 MINDY3-202ENST00000378036 2452 ntTSL 2 BASIC3.07□□□□□ -1.92
PPP4R4Q6NUP7 ZFYVE16-202ENST00000505560 6599 ntAPPRIS P1 TSL 1 (best) BASIC3.06□□□□□ -1.92
PPP4R4Q6NUP7 SLC9C1-205ENST00000487372 3979 ntAPPRIS ALT2 TSL 1 (best) BASIC3.06□□□□□ -1.92
PPP4R4Q6NUP7 RNU4-15P-201ENST00000362613 141 ntBASIC3.06□□□□□ -1.92
PPP4R4Q6NUP7 RNU6-797P-201ENST00000363101 109 ntBASIC3.06□□□□□ -1.92
PPP4R4Q6NUP7 RNU6-1286P-201ENST00000383871 107 ntBASIC3.06□□□□□ -1.92
PPP4R4Q6NUP7 RNVU1-14-201ENST00000384770 164 ntBASIC3.06□□□□□ -1.92
PPP4R4Q6NUP7 AL590135.1-201ENST00000422215 156 ntBASIC3.06□□□□□ -1.92
PPP4R4Q6NUP7 AC019205.3-201ENST00000424573 156 ntBASIC3.06□□□□□ -1.92
PPP4R4Q6NUP7 AC016700.2-201ENST00000446011 156 ntBASIC3.06□□□□□ -1.92
PPP4R4Q6NUP7 AP000705.1-201ENST00000454567 350 ntBASIC3.06□□□□□ -1.92
PPP4R4Q6NUP7 AC022445.1-201ENST00000457499 408 ntTSL 3 BASIC3.06□□□□□ -1.92
PPP4R4Q6NUP7 AC103975.1-201ENST00000482506 483 ntBASIC3.06□□□□□ -1.92
PPP4R4Q6NUP7 AC104564.1-201ENST00000493028 407 ntBASIC3.06□□□□□ -1.92
PPP4R4Q6NUP7 AC015911.1-201ENST00000495111 156 ntBASIC3.06□□□□□ -1.92
PPP4R4Q6NUP7 LINC02501-201ENST00000510420 426 ntTSL 2 BASIC3.06□□□□□ -1.92
PPP4R4Q6NUP7 LINC01256-201ENST00000513270 508 ntTSL 2 BASIC3.06□□□□□ -1.92
PPP4R4Q6NUP7 LINC02545-201ENST00000525381 306 ntTSL 3 BASIC3.06□□□□□ -1.92
PPP4R4Q6NUP7 AP002992.1-202ENST00000530842 551 ntTSL 2 BASIC3.06□□□□□ -1.92
PPP4R4Q6NUP7 CBX3P8-201ENST00000532412 525 ntBASIC3.06□□□□□ -1.92
PPP4R4Q6NUP7 AP001458.1-201ENST00000532626 92 ntTSL 3 BASIC3.06□□□□□ -1.92
PPP4R4Q6NUP7 AC025271.3-201ENST00000563031 255 ntTSL 5 BASIC3.06□□□□□ -1.92
PPP4R4Q6NUP7 AC015845.1-201ENST00000579285 335 ntTSL 3 BASIC3.06□□□□□ -1.92
PPP4R4Q6NUP7 B3GNTL1P2-201ENST00000603673 288 ntBASIC3.06□□□□□ -1.92
PPP4R4Q6NUP7 AC005014.2-201ENST00000607795 599 ntBASIC3.06□□□□□ -1.92
PPP4R4Q6NUP7 GLMN-201ENST00000370360 1995 ntAPPRIS P1 TSL 1 (best) BASIC3.05□□□□□ -1.92
PPP4R4Q6NUP7 ZNF404-202ENST00000587539 1851 ntAPPRIS P2 TSL 5 BASIC3.05□□□□□ -1.92
PPP4R4Q6NUP7 MTND5P9-201ENST00000503854 1755 ntBASIC3.05□□□□□ -1.92
PPP4R4Q6NUP7 AL365361.1-201ENST00000566942 3481 ntBASIC3.05□□□□□ -1.92
PPP4R4Q6NUP7 FRS2-201ENST00000397997 6550 ntAPPRIS P1 TSL 5 BASIC3.05□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 263.5 ms