Protein–RNA interactions for Protein: Q5VTB9

RNF220, E3 ubiquitin-protein ligase RNF220, humanhuman

Predictions only

Length 566 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF220Q5VTB9 RNA5SP50-201ENST00000363731 107 ntBASIC3□□□□□ -1.93
RNF220Q5VTB9 Y_RNA.579-201ENST00000390939 94 ntBASIC3□□□□□ -1.93
RNF220Q5VTB9 AL590004.2-201ENST00000404787 371 ntBASIC3□□□□□ -1.93
RNF220Q5VTB9 AC006150.1-201ENST00000412014 263 ntTSL 5 BASIC3□□□□□ -1.93
RNF220Q5VTB9 LINC02331-201ENST00000418927 602 ntTSL 5 BASIC3□□□□□ -1.93
RNF220Q5VTB9 AC093423.2-201ENST00000429074 437 ntTSL 3 BASIC3□□□□□ -1.93
RNF220Q5VTB9 AC104332.2-201ENST00000429959 156 ntBASIC3□□□□□ -1.93
RNF220Q5VTB9 AL591501.1-201ENST00000439992 495 ntTSL 5 BASIC3□□□□□ -1.93
RNF220Q5VTB9 RN7SKP210-201ENST00000459176 261 ntBASIC3□□□□□ -1.93
RNF220Q5VTB9 AC068781.1-201ENST00000488231 618 ntBASIC3□□□□□ -1.93
RNF220Q5VTB9 RPL17P19-201ENST00000489069 552 ntBASIC3□□□□□ -1.93
RNF220Q5VTB9 AC021146.2-201ENST00000504736 556 ntBASIC3□□□□□ -1.93
RNF220Q5VTB9 RNU6-56P-201ENST00000516986 93 ntBASIC3□□□□□ -1.93
RNF220Q5VTB9 AC023632.4-201ENST00000517783 191 ntBASIC3□□□□□ -1.93
RNF220Q5VTB9 AP001189.6-201ENST00000528781 831 ntTSL 1 (best) BASIC3□□□□□ -1.93
RNF220Q5VTB9 AC090985.1-201ENST00000554440 480 ntTSL 2 BASIC3□□□□□ -1.93
RNF220Q5VTB9 AC093249.1-201ENST00000567049 203 ntBASIC3□□□□□ -1.93
RNF220Q5VTB9 RPL23AP88-201ENST00000605759 454 ntBASIC3□□□□□ -1.93
RNF220Q5VTB9 AC005014.2-201ENST00000607795 599 ntBASIC3□□□□□ -1.93
RNF220Q5VTB9 AC023490.1-201ENST00000614584 375 ntTSL 2 BASIC3□□□□□ -1.93
RNF220Q5VTB9 AC137590.2-201ENST00000619709 240 ntBASIC3□□□□□ -1.93
RNF220Q5VTB9 AC011718.1-201ENST00000622906 375 ntTSL 1 (best) BASIC3□□□□□ -1.93
RNF220Q5VTB9 ABCA9-AS1-203ENST00000627596 426 ntTSL 5 BASIC3□□□□□ -1.93
RNF220Q5VTB9 SCARNA4-201ENST00000629045 128 ntBASIC3□□□□□ -1.93
RNF220Q5VTB9 PHTF2-201ENST00000248550 4778 ntTSL 1 (best) BASIC3□□□□□ -1.93
RNF220Q5VTB9 ZNF680-202ENST00000447137 2159 ntTSL 2 BASIC3□□□□□ -1.93
RNF220Q5VTB9 AC242426.3-202ENST00000607149 2397 ntTSL 5 BASIC2.99□□□□□ -1.93
RNF220Q5VTB9 RNU6-1159P-201ENST00000362933 107 ntBASIC2.99□□□□□ -1.93
RNF220Q5VTB9 RNU1-72P-201ENST00000362976 153 ntBASIC2.99□□□□□ -1.93
RNF220Q5VTB9 RNU1-33P-201ENST00000364249 162 ntBASIC2.99□□□□□ -1.93
RNF220Q5VTB9 DEFB119-202ENST00000376315 324 ntAPPRIS ALT2 TSL 1 (best) BASIC2.99□□□□□ -1.93
RNF220Q5VTB9 SNORD88.1-201ENST00000408684 91 ntBASIC2.99□□□□□ -1.93
RNF220Q5VTB9 AL358453.1-201ENST00000422522 250 ntBASIC2.99□□□□□ -1.93
RNF220Q5VTB9 AL445687.1-201ENST00000439946 251 ntBASIC2.99□□□□□ -1.93
RNF220Q5VTB9 UBBP3-201ENST00000445497 241 ntBASIC2.99□□□□□ -1.93
RNF220Q5VTB9 UBE2V1P7-201ENST00000446395 340 ntBASIC2.99□□□□□ -1.93
RNF220Q5VTB9 EEF1B2P7-201ENST00000451177 676 ntBASIC2.99□□□□□ -1.93
RNF220Q5VTB9 AL353752.1-201ENST00000454946 260 ntBASIC2.99□□□□□ -1.93
RNF220Q5VTB9 AC012081.1-201ENST00000462382 477 ntTSL 3 BASIC2.99□□□□□ -1.93
RNF220Q5VTB9 AC027575.1-201ENST00000481064 460 ntBASIC2.99□□□□□ -1.93
RNF220Q5VTB9 AC022493.2-201ENST00000506122 481 ntBASIC2.99□□□□□ -1.93
RNF220Q5VTB9 RNU6-470P-201ENST00000515954 104 ntBASIC2.99□□□□□ -1.93
RNF220Q5VTB9 AC108449.1-202ENST00000517632 478 ntTSL 3 BASIC2.99□□□□□ -1.93
RNF220Q5VTB9 AC105999.1-201ENST00000518722 473 ntTSL 3 BASIC2.99□□□□□ -1.93
RNF220Q5VTB9 AP000889.1-201ENST00000530968 660 ntBASIC2.99□□□□□ -1.93
RNF220Q5VTB9 AL590705.4-201ENST00000532209 134 ntBASIC2.99□□□□□ -1.93
RNF220Q5VTB9 AC007458.1-201ENST00000542812 373 ntBASIC2.99□□□□□ -1.93
RNF220Q5VTB9 CYP4A27P-201ENST00000567218 190 ntBASIC2.99□□□□□ -1.93
RNF220Q5VTB9 PWRN1-209ENST00000568019 359 ntTSL 3 BASIC2.99□□□□□ -1.93
RNF220Q5VTB9 SMAD5-AS1_2.1-201ENST00000617906 131 ntBASIC2.99□□□□□ -1.93
RNF220Q5VTB9 MIR5739-201ENST00000619803 80 ntBASIC2.99□□□□□ -1.93
RNF220Q5VTB9 AC034229.5-201ENST00000624258 185 ntBASIC2.99□□□□□ -1.93
RNF220Q5VTB9 HDX-206ENST00000506585 6158 ntTSL 2 BASIC2.99□□□□□ -1.93
RNF220Q5VTB9 GLMN-201ENST00000370360 1995 ntAPPRIS P1 TSL 1 (best) BASIC2.99□□□□□ -1.93
RNF220Q5VTB9 ARHGAP5-202ENST00000345122 9604 ntAPPRIS P3 TSL 5 BASIC2.99□□□□□ -1.93
RNF220Q5VTB9 FOXP2-211ENST00000408937 6443 ntTSL 1 (best) BASIC2.99□□□□□ -1.93
RNF220Q5VTB9 FRS2-201ENST00000397997 6550 ntAPPRIS P1 TSL 5 BASIC2.99□□□□□ -1.93
RNF220Q5VTB9 MANEA-201ENST00000358812 4575 ntAPPRIS P1 TSL 1 (best) BASIC2.98□□□□□ -1.93
RNF220Q5VTB9 MCF2-204ENST00000414978 3813 ntAPPRIS ALT2 TSL 5 BASIC2.98□□□□□ -1.93
RNF220Q5VTB9 AC128685.1-201ENST00000490357 1834 ntTSL 5 BASIC2.98□□□□□ -1.93
RNF220Q5VTB9 IL6ST-201ENST00000336909 8776 ntAPPRIS P1 TSL 2 BASIC2.98□□□□□ -1.93
RNF220Q5VTB9 snoU2_19.1-201ENST00000362361 80 ntBASIC2.98□□□□□ -1.93
RNF220Q5VTB9 RNU6-1040P-201ENST00000383974 107 ntBASIC2.98□□□□□ -1.93
RNF220Q5VTB9 RNU6-220P-201ENST00000390919 107 ntBASIC2.98□□□□□ -1.93
RNF220Q5VTB9 PTMAP2-201ENST00000397627 327 ntBASIC2.98□□□□□ -1.93
RNF220Q5VTB9 FO393413.1-201ENST00000402892 195 ntBASIC2.98□□□□□ -1.93
RNF220Q5VTB9 RNU6ATAC34P-201ENST00000408879 121 ntBASIC2.98□□□□□ -1.93
RNF220Q5VTB9 AL590556.1-201ENST00000423231 483 ntBASIC2.98□□□□□ -1.93
RNF220Q5VTB9 AC092427.1-202ENST00000430569 476 ntBASIC2.98□□□□□ -1.93
RNF220Q5VTB9 AL353997.1-201ENST00000432936 108 ntBASIC2.98□□□□□ -1.93
RNF220Q5VTB9 AL356124.2-201ENST00000442449 391 ntTSL 5 BASIC2.98□□□□□ -1.93
RNF220Q5VTB9 snoU13.30-201ENST00000458951 104 ntBASIC2.98□□□□□ -1.93
RNF220Q5VTB9 AC087477.1-201ENST00000465747 340 ntBASIC2.98□□□□□ -1.93
RNF220Q5VTB9 RPL30P10-201ENST00000488148 337 ntBASIC2.98□□□□□ -1.93
RNF220Q5VTB9 AF186996.7-201ENST00000492781 209 ntBASIC2.98□□□□□ -1.93
RNF220Q5VTB9 AC099520.1-202ENST00000503650 777 ntTSL 3 BASIC2.98□□□□□ -1.93
RNF220Q5VTB9 RNU7-175P-201ENST00000515915 61 ntBASIC2.98□□□□□ -1.93
RNF220Q5VTB9 AC023866.1-201ENST00000518064 579 ntTSL 4 BASIC2.98□□□□□ -1.93
RNF220Q5VTB9 AP003123.1-201ENST00000526041 333 ntTSL 2 BASIC2.98□□□□□ -1.93
RNF220Q5VTB9 AP002992.1-202ENST00000530842 551 ntTSL 2 BASIC2.98□□□□□ -1.93
RNF220Q5VTB9 SARNP-203ENST00000552080 726 ntTSL 2 BASIC2.98□□□□□ -1.93
RNF220Q5VTB9 MIR5701-3-201ENST00000578890 82 ntBASIC2.98□□□□□ -1.93
RNF220Q5VTB9 MIR1254-2-201ENST00000579553 63 ntBASIC2.98□□□□□ -1.93
RNF220Q5VTB9 AC090616.3-201ENST00000582184 217 ntBASIC2.98□□□□□ -1.93
RNF220Q5VTB9 MIR5701-1-201ENST00000585138 82 ntBASIC2.98□□□□□ -1.93
RNF220Q5VTB9 MIR5701-2-201ENST00000615634 82 ntBASIC2.98□□□□□ -1.93
RNF220Q5VTB9 AL591030.1-201ENST00000626131 627 ntTSL 3 BASIC2.98□□□□□ -1.93
RNF220Q5VTB9 ABCG2-204ENST00000515655 4276 ntTSL 1 (best) BASIC2.98□□□□□ -1.93
RNF220Q5VTB9 QSER1-204ENST00000527788 5052 ntTSL 2 BASIC2.98□□□□□ -1.93
RNF220Q5VTB9 FGF7-202ENST00000560270 1688 ntTSL 1 (best) BASIC2.98□□□□□ -1.93
RNF220Q5VTB9 PHF6-201ENST00000332070 4759 ntAPPRIS P2 TSL 1 (best) BASIC2.97□□□□□ -1.93
RNF220Q5VTB9 PAPOLA-202ENST00000392990 2588 ntTSL 5 BASIC2.97□□□□□ -1.93
RNF220Q5VTB9 ZNF804A-202ENST00000613975 3986 ntTSL 5 BASIC2.97□□□□□ -1.93
RNF220Q5VTB9 RNU4-15P-201ENST00000362613 141 ntBASIC2.97□□□□□ -1.93
RNF220Q5VTB9 MIR29B2-201ENST00000385055 81 ntBASIC2.97□□□□□ -1.93
RNF220Q5VTB9 MIR134-201ENST00000385258 73 ntBASIC2.97□□□□□ -1.93
RNF220Q5VTB9 RNU6-700P-201ENST00000391043 107 ntBASIC2.97□□□□□ -1.93
RNF220Q5VTB9 MTCYBP2-201ENST00000407745 171 ntBASIC2.97□□□□□ -1.93
RNF220Q5VTB9 AC245052.1-201ENST00000426213 410 ntTSL 3 BASIC2.97□□□□□ -1.93
RNF220Q5VTB9 AL359706.1-201ENST00000437748 315 ntTSL 3 BASIC2.97□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 119.7 ms