Protein–RNA interactions for Protein: Q3MJ40

CCDC144B, Coiled-coil domain-containing protein 144B, humanhuman

Predictions only

Length 725 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144BQ3MJ40 COTL1P1-201ENST00000422309 375 ntBASIC3.72□□□□□ -1.81
CCDC144BQ3MJ40 AC019205.3-201ENST00000424573 156 ntBASIC3.72□□□□□ -1.81
CCDC144BQ3MJ40 AC016700.2-201ENST00000446011 156 ntBASIC3.72□□□□□ -1.81
CCDC144BQ3MJ40 AC015911.1-201ENST00000495111 156 ntBASIC3.72□□□□□ -1.81
CCDC144BQ3MJ40 AC063944.1-201ENST00000496943 295 ntTSL 3 BASIC3.72□□□□□ -1.81
CCDC144BQ3MJ40 AC091874.1-201ENST00000511402 339 ntBASIC3.72□□□□□ -1.81
CCDC144BQ3MJ40 RNU6-976P-201ENST00000516086 111 ntBASIC3.72□□□□□ -1.81
CCDC144BQ3MJ40 AL590705.4-201ENST00000532209 134 ntBASIC3.72□□□□□ -1.81
CCDC144BQ3MJ40 MIR3616-201ENST00000584070 92 ntBASIC3.72□□□□□ -1.81
CCDC144BQ3MJ40 MIR4298-201ENST00000584380 73 ntBASIC3.72□□□□□ -1.81
CCDC144BQ3MJ40 AC073476.4-201ENST00000628409 72 ntBASIC3.72□□□□□ -1.81
CCDC144BQ3MJ40 SNORA43.4-201ENST00000629559 138 ntBASIC3.72□□□□□ -1.81
CCDC144BQ3MJ40 N4BP2L2-211ENST00000504114 2513 ntTSL 5 BASIC3.72□□□□□ -1.81
CCDC144BQ3MJ40 KIAA0825-203ENST00000513200 4942 ntTSL 5 BASIC3.71□□□□□ -1.81
CCDC144BQ3MJ40 CCDC168-201ENST00000322527 21466 ntAPPRIS P1 TSL 3 BASIC3.71□□□□□ -1.81
CCDC144BQ3MJ40 CUL3-204ENST00000409777 3147 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
CCDC144BQ3MJ40 KIAA1109-203ENST00000388738 15574 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
CCDC144BQ3MJ40 RTKN2-202ENST00000373789 6641 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
CCDC144BQ3MJ40 Y_RNA.510-201ENST00000384511 114 ntBASIC3.71□□□□□ -1.82
CCDC144BQ3MJ40 RNU6-700P-201ENST00000391043 107 ntBASIC3.71□□□□□ -1.82
CCDC144BQ3MJ40 CBX3P9-201ENST00000402326 552 ntBASIC3.71□□□□□ -1.82
CCDC144BQ3MJ40 AL513477.1-202ENST00000417061 214 ntBASIC3.71□□□□□ -1.82
CCDC144BQ3MJ40 EIF4EP4-201ENST00000424916 578 ntBASIC3.71□□□□□ -1.82
CCDC144BQ3MJ40 AIMP1P2-201ENST00000425294 312 ntBASIC3.71□□□□□ -1.82
CCDC144BQ3MJ40 MTND1P14-201ENST00000427400 950 ntBASIC3.71□□□□□ -1.82
CCDC144BQ3MJ40 ZFY-AS1-202ENST00000431145 419 ntTSL 3 BASIC3.71□□□□□ -1.82
CCDC144BQ3MJ40 AC133865.1-201ENST00000438619 339 ntTSL 3 BASIC3.71□□□□□ -1.82
CCDC144BQ3MJ40 AC117462.1-201ENST00000461186 554 ntTSL 4 BASIC3.71□□□□□ -1.82
CCDC144BQ3MJ40 AL121594.1-201ENST00000475906 575 ntBASIC3.71□□□□□ -1.82
CCDC144BQ3MJ40 RPL30P10-201ENST00000488148 337 ntBASIC3.71□□□□□ -1.82
CCDC144BQ3MJ40 Y_RNA.701-201ENST00000516812 110 ntBASIC3.71□□□□□ -1.82
CCDC144BQ3MJ40 AP003123.1-201ENST00000526041 333 ntTSL 2 BASIC3.71□□□□□ -1.82
CCDC144BQ3MJ40 AP001189.6-201ENST00000528781 831 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
CCDC144BQ3MJ40 SUB1P3-201ENST00000564581 315 ntBASIC3.71□□□□□ -1.82
CCDC144BQ3MJ40 AC044792.1-201ENST00000593294 196 ntBASIC3.71□□□□□ -1.82
CCDC144BQ3MJ40 AL158827.2-201ENST00000602494 330 ntBASIC3.71□□□□□ -1.82
CCDC144BQ3MJ40 AC022140.2-201ENST00000623500 188 ntBASIC3.71□□□□□ -1.82
CCDC144BQ3MJ40 NCBP1-205ENST00000629069 249 ntTSL 5 BASIC3.71□□□□□ -1.82
CCDC144BQ3MJ40 AL691447.3-201ENST00000635020 330 ntBASIC3.71□□□□□ -1.82
CCDC144BQ3MJ40 SNORD98-201ENST00000636377 67 ntBASIC3.71□□□□□ -1.82
CCDC144BQ3MJ40 CPD-202ENST00000543464 4007 ntTSL 2 BASIC3.71□□□□□ -1.82
CCDC144BQ3MJ40 BCLAF1P1-201ENST00000505813 2752 ntBASIC3.71□□□□□ -1.82
CCDC144BQ3MJ40 RNU6-1159P-201ENST00000362933 107 ntBASIC3.7□□□□□ -1.82
CCDC144BQ3MJ40 Y_RNA.197-201ENST00000364004 102 ntBASIC3.7□□□□□ -1.82
CCDC144BQ3MJ40 SNORA29-201ENST00000384183 140 ntBASIC3.7□□□□□ -1.82
CCDC144BQ3MJ40 Y_RNA.500-201ENST00000384466 111 ntBASIC3.7□□□□□ -1.82
CCDC144BQ3MJ40 Y_RNA.639-201ENST00000458981 102 ntBASIC3.7□□□□□ -1.82
CCDC144BQ3MJ40 RN7SL863P-201ENST00000462370 296 ntBASIC3.7□□□□□ -1.82
CCDC144BQ3MJ40 RPL23AP67-201ENST00000465341 474 ntBASIC3.7□□□□□ -1.82
CCDC144BQ3MJ40 AC090525.1-201ENST00000479116 478 ntBASIC3.7□□□□□ -1.82
CCDC144BQ3MJ40 HMGB1P35-201ENST00000503360 598 ntBASIC3.7□□□□□ -1.82
CCDC144BQ3MJ40 AC022493.2-201ENST00000506122 481 ntBASIC3.7□□□□□ -1.82
CCDC144BQ3MJ40 AC025244.2-201ENST00000509215 422 ntTSL 3 BASIC3.7□□□□□ -1.82
CCDC144BQ3MJ40 AC108067.1-201ENST00000514304 215 ntTSL 5 BASIC3.7□□□□□ -1.82
CCDC144BQ3MJ40 AC139720.2-201ENST00000514766 440 ntTSL 2 BASIC3.7□□□□□ -1.82
CCDC144BQ3MJ40 RNU7-175P-201ENST00000515915 61 ntBASIC3.7□□□□□ -1.82
CCDC144BQ3MJ40 RNU5F-2P-201ENST00000516066 82 ntBASIC3.7□□□□□ -1.82
CCDC144BQ3MJ40 AC245166.1-201ENST00000521012 253 ntBASIC3.7□□□□□ -1.82
CCDC144BQ3MJ40 AP002884.4-201ENST00000527589 594 ntTSL 3 BASIC3.7□□□□□ -1.82
CCDC144BQ3MJ40 AC020910.1-201ENST00000599404 413 ntTSL 5 BASIC3.7□□□□□ -1.82
CCDC144BQ3MJ40 AL080274.1-201ENST00000605565 220 ntBASIC3.7□□□□□ -1.82
CCDC144BQ3MJ40 AC005014.2-201ENST00000607795 599 ntBASIC3.7□□□□□ -1.82
CCDC144BQ3MJ40 SCARNA4-201ENST00000629045 128 ntBASIC3.7□□□□□ -1.82
CCDC144BQ3MJ40 MT-ND4-201ENST00000361381 1378 ntAPPRIS P1 BASIC3.7□□□□□ -1.82
CCDC144BQ3MJ40 ZBBX-201ENST00000307529 3071 ntAPPRIS ALT2 TSL 5 BASIC3.7□□□□□ -1.82
CCDC144BQ3MJ40 ZBBX-204ENST00000392767 3071 ntAPPRIS ALT2 TSL 5 BASIC3.7□□□□□ -1.82
CCDC144BQ3MJ40 HIF1A-201ENST00000323441 3555 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
CCDC144BQ3MJ40 PPIP5K2-203ENST00000414217 5842 ntAPPRIS P3 TSL 1 (best) BASIC3.7□□□□□ -1.82
CCDC144BQ3MJ40 AL365361.1-201ENST00000566942 3481 ntBASIC3.69□□□□□ -1.82
CCDC144BQ3MJ40 AC093831.2-201ENST00000624393 3427 ntBASIC3.69□□□□□ -1.82
CCDC144BQ3MJ40 Y_RNA.48-201ENST00000362710 103 ntBASIC3.69□□□□□ -1.82
CCDC144BQ3MJ40 SNORA80A-201ENST00000363922 136 ntBASIC3.69□□□□□ -1.82
CCDC144BQ3MJ40 AL138885.1-201ENST00000405921 675 ntBASIC3.69□□□□□ -1.82
CCDC144BQ3MJ40 AC010731.3-201ENST00000415029 566 ntTSL 4 BASIC3.69□□□□□ -1.82
CCDC144BQ3MJ40 MTCYBP10-201ENST00000424905 650 ntBASIC3.69□□□□□ -1.82
CCDC144BQ3MJ40 MTCO2P12-201ENST00000427426 682 ntBASIC3.69□□□□□ -1.82
CCDC144BQ3MJ40 RPS12P18-201ENST00000442381 270 ntBASIC3.69□□□□□ -1.82
CCDC144BQ3MJ40 AC080013.2-201ENST00000460866 323 ntBASIC3.69□□□□□ -1.82
CCDC144BQ3MJ40 RPL23AP75-201ENST00000491601 451 ntBASIC3.69□□□□□ -1.82
CCDC144BQ3MJ40 RPL23AP94-201ENST00000512518 302 ntBASIC3.69□□□□□ -1.82
CCDC144BQ3MJ40 SNORA25.11-201ENST00000515935 105 ntBASIC3.69□□□□□ -1.82
CCDC144BQ3MJ40 AC026241.1-201ENST00000517873 2142 ntBASIC3.69□□□□□ -1.82
CCDC144BQ3MJ40 AC083973.1-205ENST00000518994 601 ntTSL 2 BASIC3.69□□□□□ -1.82
CCDC144BQ3MJ40 MRPS36P4-201ENST00000534436 298 ntBASIC3.69□□□□□ -1.82
CCDC144BQ3MJ40 AC012100.2-201ENST00000558317 304 ntTSL 5 BASIC3.69□□□□□ -1.82
CCDC144BQ3MJ40 AC007598.2-201ENST00000569490 539 ntTSL 3 BASIC3.69□□□□□ -1.82
CCDC144BQ3MJ40 AL670379.2-201ENST00000604983 252 ntBASIC3.69□□□□□ -1.82
CCDC144BQ3MJ40 AC069294.1-201ENST00000608397 350 ntBASIC3.69□□□□□ -1.82
CCDC144BQ3MJ40 LUZP4-201ENST00000371920 1701 ntAPPRIS P2 TSL 1 (best) BASIC3.69□□□□□ -1.82
CCDC144BQ3MJ40 AC017071.1-201ENST00000564407 2204 ntBASIC3.68□□□□□ -1.82
CCDC144BQ3MJ40 ERBIN-201ENST00000284037 8647 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
CCDC144BQ3MJ40 ST7-AS2-206ENST00000456577 1351 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
CCDC144BQ3MJ40 RNU1-70P-201ENST00000362618 164 ntBASIC3.68□□□□□ -1.82
CCDC144BQ3MJ40 Y_RNA.40-201ENST00000362645 93 ntBASIC3.68□□□□□ -1.82
CCDC144BQ3MJ40 RNU5B-2P-201ENST00000363036 113 ntBASIC3.68□□□□□ -1.82
CCDC144BQ3MJ40 RNU6-1011P-201ENST00000384668 107 ntBASIC3.68□□□□□ -1.82
CCDC144BQ3MJ40 RPL21P3-201ENST00000395517 478 ntBASIC3.68□□□□□ -1.82
CCDC144BQ3MJ40 MIR1302-11-201ENST00000408051 138 ntBASIC3.68□□□□□ -1.82
CCDC144BQ3MJ40 MIR1302-9-201ENST00000408365 138 ntBASIC3.68□□□□□ -1.82
CCDC144BQ3MJ40 MIR1302-10-201ENST00000408734 138 ntBASIC3.68□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 104.3 ms