Protein–RNA interactions for Protein: Q3LFD5

USP41, Putative ubiquitin carboxyl-terminal hydrolase 41, humanhuman

Predictions only

Length 358 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP41Q3LFD5 TRAV32-201ENST00000553993 340 ntBASIC2.66□□□□□ -1.98
USP41Q3LFD5 AC060766.3-201ENST00000591442 263 ntBASIC2.66□□□□□ -1.98
USP41Q3LFD5 RPS15AP11-201ENST00000594193 385 ntBASIC2.66□□□□□ -1.98
USP41Q3LFD5 AC096772.1-201ENST00000609146 564 ntBASIC2.66□□□□□ -1.98
USP41Q3LFD5 ZNRD1-AS1_3.8-201ENST00000611686 104 ntBASIC2.66□□□□□ -1.98
USP41Q3LFD5 uc_338.15-201ENST00000615470 191 ntBASIC2.66□□□□□ -1.98
USP41Q3LFD5 AC024581.2-201ENST00000619986 252 ntBASIC2.66□□□□□ -1.98
USP41Q3LFD5 WARS-244ENST00000627608 123 ntTSL 5 BASIC2.66□□□□□ -1.98
USP41Q3LFD5 CCDC66-201ENST00000326595 3027 ntAPPRIS P3 TSL 1 (best) BASIC2.66□□□□□ -1.98
USP41Q3LFD5 ZNF658B-202ENST00000615961 3375 ntBASIC2.66□□□□□ -1.98
USP41Q3LFD5 ZBBX-201ENST00000307529 3071 ntAPPRIS ALT2 TSL 5 BASIC2.66□□□□□ -1.98
USP41Q3LFD5 ZBBX-204ENST00000392767 3071 ntAPPRIS ALT2 TSL 5 BASIC2.66□□□□□ -1.98
USP41Q3LFD5 CUL2-206ENST00000421317 2376 ntTSL 2 BASIC2.66□□□□□ -1.98
USP41Q3LFD5 AL359854.1-201ENST00000614203 1594 ntBASIC2.66□□□□□ -1.98
USP41Q3LFD5 AASDH-207ENST00000513376 3241 ntTSL 1 (best) BASIC2.65□□□□□ -1.98
USP41Q3LFD5 OSTN-201ENST00000339051 402 ntAPPRIS P1 TSL 1 (best) BASIC2.65□□□□□ -1.99
USP41Q3LFD5 U8.2-201ENST00000363156 134 ntBASIC2.65□□□□□ -1.99
USP41Q3LFD5 Y_RNA.135-201ENST00000363439 95 ntBASIC2.65□□□□□ -1.99
USP41Q3LFD5 MIR544A-201ENST00000384855 91 ntBASIC2.65□□□□□ -1.99
USP41Q3LFD5 RPS29P13-201ENST00000402041 169 ntBASIC2.65□□□□□ -1.99
USP41Q3LFD5 AC093911.1-201ENST00000419129 552 ntTSL 4 BASIC2.65□□□□□ -1.99
USP41Q3LFD5 KCNJ6-AS1-201ENST00000435001 357 ntTSL 5 BASIC2.65□□□□□ -1.99
USP41Q3LFD5 LINC01710-201ENST00000446002 390 ntTSL 5 BASIC2.65□□□□□ -1.99
USP41Q3LFD5 FTH1P25-201ENST00000447665 469 ntBASIC2.65□□□□□ -1.99
USP41Q3LFD5 AC130509.1-201ENST00000464158 433 ntBASIC2.65□□□□□ -1.99
USP41Q3LFD5 RPL9P9-202ENST00000466501 579 ntBASIC2.65□□□□□ -1.99
USP41Q3LFD5 SNRPGP7-201ENST00000469016 106 ntBASIC2.65□□□□□ -1.99
USP41Q3LFD5 RPL30P12-201ENST00000474666 353 ntBASIC2.65□□□□□ -1.99
USP41Q3LFD5 AC018437.1-201ENST00000492214 406 ntBASIC2.65□□□□□ -1.99
USP41Q3LFD5 AC134698.4-201ENST00000523451 826 ntBASIC2.65□□□□□ -1.99
USP41Q3LFD5 AC105137.2-201ENST00000569073 466 ntBASIC2.65□□□□□ -1.99
USP41Q3LFD5 MIR4790-201ENST00000577799 79 ntBASIC2.65□□□□□ -1.99
USP41Q3LFD5 UBE2V2P2-201ENST00000587677 504 ntBASIC2.65□□□□□ -1.99
USP41Q3LFD5 BNIP3P16-201ENST00000589779 534 ntBASIC2.65□□□□□ -1.99
USP41Q3LFD5 AL022345.1-201ENST00000607292 135 ntBASIC2.65□□□□□ -1.99
USP41Q3LFD5 RNU6-91P-201ENST00000607774 107 ntBASIC2.65□□□□□ -1.99
USP41Q3LFD5 AL355073.2-201ENST00000612106 557 ntBASIC2.65□□□□□ -1.99
USP41Q3LFD5 AC104237.2-201ENST00000612456 443 ntBASIC2.65□□□□□ -1.99
USP41Q3LFD5 MIR6715A-201ENST00000615929 79 ntBASIC2.65□□□□□ -1.99
USP41Q3LFD5 AL161782.1-201ENST00000622930 586 ntTSL 3 BASIC2.65□□□□□ -1.99
USP41Q3LFD5 AC241585.2-209ENST00000638217 143 ntBASIC2.65□□□□□ -1.99
USP41Q3LFD5 OFD1P6Y-202ENST00000451061 2724 ntBASIC2.65□□□□□ -1.99
USP41Q3LFD5 TXLNGY-201ENST00000253320 7299 ntTSL 2 BASIC2.64□□□□□ -1.99
USP41Q3LFD5 PARPBP-203ENST00000392911 1916 ntTSL 5 BASIC2.64□□□□□ -1.99
USP41Q3LFD5 MTND4P23-201ENST00000447723 1363 ntBASIC2.64□□□□□ -1.99
USP41Q3LFD5 LINC01592-202ENST00000518540 2367 ntTSL 2 BASIC2.64□□□□□ -1.99
USP41Q3LFD5 ZNF271P-202ENST00000465539 1970 ntBASIC2.64□□□□□ -1.99
USP41Q3LFD5 RNU6-1317P-201ENST00000364582 104 ntBASIC2.64□□□□□ -1.99
USP41Q3LFD5 RNU6-1180P-201ENST00000364935 107 ntBASIC2.64□□□□□ -1.99
USP41Q3LFD5 SNORD81.2-201ENST00000365153 76 ntBASIC2.64□□□□□ -1.99
USP41Q3LFD5 RNU6-487P-201ENST00000365430 104 ntBASIC2.64□□□□□ -1.99
USP41Q3LFD5 RNU6-692P-201ENST00000384496 107 ntBASIC2.64□□□□□ -1.99
USP41Q3LFD5 RNU6-95P-201ENST00000384697 107 ntBASIC2.64□□□□□ -1.99
USP41Q3LFD5 MIR218-1-201ENST00000384999 110 ntBASIC2.64□□□□□ -1.99
USP41Q3LFD5 RNA5SP210-201ENST00000391034 120 ntBASIC2.64□□□□□ -1.99
USP41Q3LFD5 RNU6-1328P-201ENST00000410938 106 ntBASIC2.64□□□□□ -1.99
USP41Q3LFD5 PDCL2P1-201ENST00000419302 352 ntBASIC2.64□□□□□ -1.99
USP41Q3LFD5 SNAP23P1-201ENST00000433229 246 ntBASIC2.64□□□□□ -1.99
USP41Q3LFD5 RPS15AP7-201ENST00000439294 405 ntBASIC2.64□□□□□ -1.99
USP41Q3LFD5 AC243964.1-201ENST00000441814 261 ntBASIC2.64□□□□□ -1.99
USP41Q3LFD5 MAMDC2-AS1-205ENST00000451488 317 ntTSL 3 BASIC2.64□□□□□ -1.99
USP41Q3LFD5 AL034345.2-203ENST00000453417 383 ntTSL 3 BASIC2.64□□□□□ -1.99
USP41Q3LFD5 RNU7-187P-201ENST00000458985 68 ntBASIC2.64□□□□□ -1.99
USP41Q3LFD5 RPL22P13-201ENST00000493291 347 ntBASIC2.64□□□□□ -1.99
USP41Q3LFD5 YWHAEP4-201ENST00000505390 198 ntBASIC2.64□□□□□ -1.99
USP41Q3LFD5 AC103851.1-201ENST00000506833 274 ntBASIC2.64□□□□□ -1.99
USP41Q3LFD5 AC074131.1-201ENST00000514662 253 ntTSL 2 BASIC2.64□□□□□ -1.99
USP41Q3LFD5 SNORA31.18-201ENST00000517043 134 ntBASIC2.64□□□□□ -1.99
USP41Q3LFD5 RNA5SP454-201ENST00000517231 127 ntBASIC2.64□□□□□ -1.99
USP41Q3LFD5 AC103957.1-201ENST00000517681 503 ntTSL 3 BASIC2.64□□□□□ -1.99
USP41Q3LFD5 AC022039.1-201ENST00000527110 488 ntTSL 2 BASIC2.64□□□□□ -1.99
USP41Q3LFD5 COX6CP5-201ENST00000527162 228 ntBASIC2.64□□□□□ -1.99
USP41Q3LFD5 AC023906.2-201ENST00000558343 462 ntTSL 3 BASIC2.64□□□□□ -1.99
USP41Q3LFD5 PWRN1-209ENST00000568019 359 ntTSL 3 BASIC2.64□□□□□ -1.99
USP41Q3LFD5 AC103810.1-201ENST00000579873 453 ntBASIC2.64□□□□□ -1.99
USP41Q3LFD5 AC090897.2-201ENST00000581715 130 ntBASIC2.64□□□□□ -1.99
USP41Q3LFD5 MIR5092-201ENST00000583139 88 ntBASIC2.64□□□□□ -1.99
USP41Q3LFD5 LINC02112-205ENST00000606744 236 ntTSL 1 (best) BASIC2.64□□□□□ -1.99
USP41Q3LFD5 AC092794.2-201ENST00000620933 563 ntBASIC2.64□□□□□ -1.99
USP41Q3LFD5 Clostridiales-1.2-201ENST00000636724 160 ntBASIC2.64□□□□□ -1.99
USP41Q3LFD5 MTND5P30-201ENST00000452896 1731 ntBASIC2.64□□□□□ -1.99
USP41Q3LFD5 DPY19L2P1-203ENST00000458672 3347 ntTSL 1 (best) BASIC2.64□□□□□ -1.99
USP41Q3LFD5 Z75746.1-201ENST00000440243 2080 ntBASIC2.64□□□□□ -1.99
USP41Q3LFD5 COPS2-203ENST00000542928 1580 ntTSL 2 BASIC2.63□□□□□ -1.99
USP41Q3LFD5 DYNC2H1-202ENST00000375735 13678 ntAPPRIS ALT1 TSL 1 (best) BASIC2.63□□□□□ -1.99
USP41Q3LFD5 SNORD114-19-201ENST00000363072 75 ntBASIC2.63□□□□□ -1.99
USP41Q3LFD5 Y_RNA.184-201ENST00000363884 108 ntBASIC2.63□□□□□ -1.99
USP41Q3LFD5 RNA5SP456-201ENST00000364002 114 ntBASIC2.63□□□□□ -1.99
USP41Q3LFD5 RNU6-622P-201ENST00000384272 103 ntBASIC2.63□□□□□ -1.99
USP41Q3LFD5 TRAV41-201ENST00000390468 336 ntAPPRIS P1 BASIC2.63□□□□□ -1.99
USP41Q3LFD5 RNA5SP390-201ENST00000410191 113 ntBASIC2.63□□□□□ -1.99
USP41Q3LFD5 RNU6-325P-201ENST00000411132 105 ntBASIC2.63□□□□□ -1.99
USP41Q3LFD5 RN7SKP192-201ENST00000411291 327 ntBASIC2.63□□□□□ -1.99
USP41Q3LFD5 AL030996.1-201ENST00000411430 235 ntBASIC2.63□□□□□ -1.99
USP41Q3LFD5 AL135786.1-201ENST00000415892 214 ntBASIC2.63□□□□□ -1.99
USP41Q3LFD5 Z98742.3-201ENST00000418637 326 ntBASIC2.63□□□□□ -1.99
USP41Q3LFD5 AL445989.1-202ENST00000418943 776 ntTSL 2 BASIC2.63□□□□□ -1.99
USP41Q3LFD5 AC097463.2-201ENST00000421074 142 ntBASIC2.63□□□□□ -1.99
USP41Q3LFD5 AL358234.1-201ENST00000421132 273 ntTSL 5 BASIC2.63□□□□□ -1.99
USP41Q3LFD5 AL139396.1-201ENST00000421137 167 ntBASIC2.63□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 82.8 ms