Protein–RNA interactions for Protein: Q2Q1W2

TRIM71, E3 ubiquitin-protein ligase TRIM71, humanhuman

Known RBP Predictions only

Length 868 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM71Q2Q1W2 SNORA9.2-201ENST00000365361 133 ntBASIC3.18□□□□□ -1.9
TRIM71Q2Q1W2 RNU6-196P-201ENST00000384315 107 ntBASIC3.18□□□□□ -1.9
TRIM71Q2Q1W2 MRPL42P3-201ENST00000401492 326 ntBASIC3.18□□□□□ -1.9
TRIM71Q2Q1W2 MIR548F4-201ENST00000408515 105 ntBASIC3.18□□□□□ -1.9
TRIM71Q2Q1W2 RN7SKP284-201ENST00000411002 343 ntBASIC3.18□□□□□ -1.9
TRIM71Q2Q1W2 AC092660.1-201ENST00000420648 371 ntTSL 2 BASIC3.18□□□□□ -1.9
TRIM71Q2Q1W2 AC005160.1-201ENST00000432405 381 ntTSL 3 BASIC3.18□□□□□ -1.9
TRIM71Q2Q1W2 AL645568.3-201ENST00000433683 316 ntBASIC3.18□□□□□ -1.9
TRIM71Q2Q1W2 AL157937.1-201ENST00000435092 443 ntTSL 3 BASIC3.18□□□□□ -1.9
TRIM71Q2Q1W2 LINC02264-201ENST00000442020 576 ntTSL 3 BASIC3.18□□□□□ -1.9
TRIM71Q2Q1W2 RPL23AP45-201ENST00000476406 468 ntBASIC3.18□□□□□ -1.9
TRIM71Q2Q1W2 SRP72-202ENST00000504757 745 ntTSL 2 BASIC3.18□□□□□ -1.9
TRIM71Q2Q1W2 AC096745.1-201ENST00000509945 370 ntBASIC3.18□□□□□ -1.9
TRIM71Q2Q1W2 SNORA25.10-201ENST00000515926 124 ntBASIC3.18□□□□□ -1.9
TRIM71Q2Q1W2 RNU6-377P-201ENST00000515965 102 ntBASIC3.18□□□□□ -1.9
TRIM71Q2Q1W2 RNU4ATAC7P-201ENST00000516280 125 ntBASIC3.18□□□□□ -1.9
TRIM71Q2Q1W2 RNU6-56P-201ENST00000516986 93 ntBASIC3.18□□□□□ -1.9
TRIM71Q2Q1W2 AC023866.1-201ENST00000518064 579 ntTSL 4 BASIC3.18□□□□□ -1.9
TRIM71Q2Q1W2 AC113192.4-201ENST00000534666 547 ntTSL 4 BASIC3.18□□□□□ -1.9
TRIM71Q2Q1W2 AC107016.2-201ENST00000547968 190 ntBASIC3.18□□□□□ -1.9
TRIM71Q2Q1W2 AC005696.2-201ENST00000610120 626 ntTSL 3 BASIC3.18□□□□□ -1.9
TRIM71Q2Q1W2 AC013412.1-201ENST00000610687 192 ntBASIC3.18□□□□□ -1.9
TRIM71Q2Q1W2 AC138305.3-201ENST00000624988 240 ntBASIC3.18□□□□□ -1.9
TRIM71Q2Q1W2 AC110079.1-202ENST00000635213 138 ntBASIC3.18□□□□□ -1.9
TRIM71Q2Q1W2 HDX-201ENST00000297977 6200 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
TRIM71Q2Q1W2 AP003122.5-201ENST00000527668 3766 ntBASIC3.18□□□□□ -1.9
TRIM71Q2Q1W2 AC092435.3-201ENST00000565538 3654 ntBASIC3.17□□□□□ -1.9
TRIM71Q2Q1W2 AC010889.1-201ENST00000566193 2666 ntBASIC3.17□□□□□ -1.9
TRIM71Q2Q1W2 HMGN5-201ENST00000358130 2126 ntAPPRIS P2 TSL 2 BASIC3.17□□□□□ -1.9
TRIM71Q2Q1W2 MUC7-202ENST00000413702 2540 ntAPPRIS P2 TSL 4 BASIC3.17□□□□□ -1.9
TRIM71Q2Q1W2 RNU6-527P-201ENST00000363425 104 ntBASIC3.17□□□□□ -1.9
TRIM71Q2Q1W2 RNU1-100P-201ENST00000365255 165 ntBASIC3.17□□□□□ -1.9
TRIM71Q2Q1W2 Y_RNA.473-201ENST00000384333 102 ntBASIC3.17□□□□□ -1.9
TRIM71Q2Q1W2 RNU6-19P-201ENST00000384718 107 ntBASIC3.17□□□□□ -1.9
TRIM71Q2Q1W2 MIR568-201ENST00000385036 95 ntBASIC3.17□□□□□ -1.9
TRIM71Q2Q1W2 SNORD73A-201ENST00000386062 65 ntBASIC3.17□□□□□ -1.9
TRIM71Q2Q1W2 Y_RNA.605-201ENST00000410577 105 ntBASIC3.17□□□□□ -1.9
TRIM71Q2Q1W2 RNU2-52P-201ENST00000410680 190 ntBASIC3.17□□□□□ -1.9
TRIM71Q2Q1W2 AL365496.1-201ENST00000426885 215 ntBASIC3.17□□□□□ -1.9
TRIM71Q2Q1W2 EHHADH-202ENST00000440662 656 ntTSL 3 BASIC3.17□□□□□ -1.9
TRIM71Q2Q1W2 AC091153.2-202ENST00000441700 384 ntTSL 3 BASIC3.17□□□□□ -1.9
TRIM71Q2Q1W2 RNA5SP217-201ENST00000515959 91 ntBASIC3.17□□□□□ -1.9
TRIM71Q2Q1W2 AC104576.1-201ENST00000524225 88 ntBASIC3.17□□□□□ -1.9
TRIM71Q2Q1W2 LINC02253-201ENST00000559321 448 ntTSL 2 BASIC3.17□□□□□ -1.9
TRIM71Q2Q1W2 EAF1-AS1-207ENST00000599742 772 ntTSL 5 BASIC3.17□□□□□ -1.9
TRIM71Q2Q1W2 AL161423.1-201ENST00000613700 262 ntBASIC3.17□□□□□ -1.9
TRIM71Q2Q1W2 MGAT4C-211ENST00000621808 2582 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
TRIM71Q2Q1W2 LRRC70-201ENST00000334994 2249 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
TRIM71Q2Q1W2 ARHGAP11A-207ENST00000565905 3318 ntTSL 2 BASIC3.17□□□□□ -1.9
TRIM71Q2Q1W2 CDC27P3-201ENST00000635418 1910 ntBASIC3.17□□□□□ -1.9
TRIM71Q2Q1W2 ZNF567-201ENST00000360729 2691 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
TRIM71Q2Q1W2 AL161668.1-201ENST00000320322 358 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
TRIM71Q2Q1W2 RNU6-490P-201ENST00000362985 107 ntBASIC3.16□□□□□ -1.9
TRIM71Q2Q1W2 RNU6-574P-201ENST00000384265 107 ntBASIC3.16□□□□□ -1.9
TRIM71Q2Q1W2 RNY1P14-201ENST00000384426 108 ntBASIC3.16□□□□□ -1.9
TRIM71Q2Q1W2 RNU6-750P-201ENST00000390946 107 ntBASIC3.16□□□□□ -1.9
TRIM71Q2Q1W2 RPL21P75-201ENST00000396599 483 ntBASIC3.16□□□□□ -1.9
TRIM71Q2Q1W2 AL445529.1-201ENST00000398713 389 ntBASIC3.16□□□□□ -1.9
TRIM71Q2Q1W2 RPL21P28-201ENST00000401418 483 ntBASIC3.16□□□□□ -1.9
TRIM71Q2Q1W2 FTH1P15-201ENST00000406984 280 ntBASIC3.16□□□□□ -1.9
TRIM71Q2Q1W2 SNORD56-201ENST00000413522 71 ntBASIC3.16□□□□□ -1.9
TRIM71Q2Q1W2 AL359195.1-201ENST00000416657 339 ntTSL 3 BASIC3.16□□□□□ -1.9
TRIM71Q2Q1W2 UBE2V1P4-201ENST00000425374 344 ntBASIC3.16□□□□□ -1.9
TRIM71Q2Q1W2 AC009414.1-201ENST00000427200 443 ntBASIC3.16□□□□□ -1.9
TRIM71Q2Q1W2 MTCYBP9-201ENST00000431021 303 ntBASIC3.16□□□□□ -1.9
TRIM71Q2Q1W2 AL160004.2-201ENST00000432935 350 ntBASIC3.16□□□□□ -1.9
TRIM71Q2Q1W2 AC092813.2-201ENST00000434540 399 ntTSL 3 BASIC3.16□□□□□ -1.9
TRIM71Q2Q1W2 AC007179.2-207ENST00000435557 556 ntTSL 4 BASIC3.16□□□□□ -1.9
TRIM71Q2Q1W2 GAS5-221ENST00000450589 632 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
TRIM71Q2Q1W2 AL591504.1-201ENST00000450681 414 ntTSL 3 BASIC3.16□□□□□ -1.9
TRIM71Q2Q1W2 AL441985.1-201ENST00000457727 251 ntBASIC3.16□□□□□ -1.9
TRIM71Q2Q1W2 AL354824.2-201ENST00000458004 446 ntTSL 3 BASIC3.16□□□□□ -1.9
TRIM71Q2Q1W2 SNORD109B-201ENST00000458961 67 ntBASIC3.16□□□□□ -1.9
TRIM71Q2Q1W2 SNORD109A-201ENST00000459128 67 ntBASIC3.16□□□□□ -1.9
TRIM71Q2Q1W2 RPL21P39-201ENST00000463605 483 ntBASIC3.16□□□□□ -1.9
TRIM71Q2Q1W2 AC107626.1-201ENST00000471084 183 ntBASIC3.16□□□□□ -1.9
TRIM71Q2Q1W2 AC087190.1-201ENST00000484462 480 ntBASIC3.16□□□□□ -1.9
TRIM71Q2Q1W2 ODF2L-216ENST00000486215 311 ntTSL 2 BASIC3.16□□□□□ -1.9
TRIM71Q2Q1W2 AC093591.1-201ENST00000491435 481 ntBASIC3.16□□□□□ -1.9
TRIM71Q2Q1W2 RPL23AP49-201ENST00000492925 468 ntBASIC3.16□□□□□ -1.9
TRIM71Q2Q1W2 RPL21P16-201ENST00000495531 483 ntBASIC3.16□□□□□ -1.9
TRIM71Q2Q1W2 LINC02269-201ENST00000509968 511 ntTSL 3 BASIC3.16□□□□□ -1.9
TRIM71Q2Q1W2 AC092436.3-201ENST00000511788 257 ntBASIC3.16□□□□□ -1.9
TRIM71Q2Q1W2 RNU6-470P-201ENST00000515954 104 ntBASIC3.16□□□□□ -1.9
TRIM71Q2Q1W2 SNORA64.4-201ENST00000516632 81 ntBASIC3.16□□□□□ -1.9
TRIM71Q2Q1W2 AC010186.2-204ENST00000537668 439 ntBASIC3.16□□□□□ -1.9
TRIM71Q2Q1W2 AC007619.1-201ENST00000544086 412 ntTSL 5 BASIC3.16□□□□□ -1.9
TRIM71Q2Q1W2 POC1B-211ENST00000549504 581 ntTSL 5 BASIC3.16□□□□□ -1.9
TRIM71Q2Q1W2 UBE2Q2P8-201ENST00000560644 102 ntBASIC3.16□□□□□ -1.9
TRIM71Q2Q1W2 AC011494.1-201ENST00000596454 237 ntBASIC3.16□□□□□ -1.9
TRIM71Q2Q1W2 AC007485.1-201ENST00000616755 206 ntBASIC3.16□□□□□ -1.9
TRIM71Q2Q1W2 AC087588.2-201ENST00000617667 426 ntBASIC3.16□□□□□ -1.9
TRIM71Q2Q1W2 HOXA11-AS1_4.1-201ENST00000620901 233 ntBASIC3.16□□□□□ -1.9
TRIM71Q2Q1W2 UCA1.1-201ENST00000620952 75 ntBASIC3.16□□□□□ -1.9
TRIM71Q2Q1W2 CHD9-203ENST00000447540 11509 ntTSL 5 BASIC3.16□□□□□ -1.9
TRIM71Q2Q1W2 PRKG2-206ENST00000545647 3852 ntTSL 5 BASIC3.16□□□□□ -1.9
TRIM71Q2Q1W2 TFEC-202ENST00000320239 6605 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.9
TRIM71Q2Q1W2 Y_RNA.496-201ENST00000384444 101 ntBASIC3.15□□□□□ -1.91
TRIM71Q2Q1W2 SNORD116-20-201ENST00000384529 92 ntBASIC3.15□□□□□ -1.91
TRIM71Q2Q1W2 MIR147B-201ENST00000390185 80 ntBASIC3.15□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 95.5 ms