Protein–RNA interactions for Protein: Q15906

VPS72, Vacuolar protein sorting-associated protein 72 homolog, humanhuman

Predictions only

Length 364 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS72Q15906 RNU6-55P-201ENST00000411092 107 ntBASIC3.69□□□□□ -1.82
VPS72Q15906 HMGB3P2-201ENST00000411913 584 ntBASIC3.69□□□□□ -1.82
VPS72Q15906 LINC01162-201ENST00000447262 447 ntTSL 5 BASIC3.69□□□□□ -1.82
VPS72Q15906 AL441989.1-201ENST00000454204 382 ntTSL 3 BASIC3.69□□□□□ -1.82
VPS72Q15906 AC074033.2-201ENST00000480669 535 ntTSL 3 BASIC3.69□□□□□ -1.82
VPS72Q15906 AC022493.1-201ENST00000492984 337 ntBASIC3.69□□□□□ -1.82
VPS72Q15906 RPS27AP10-201ENST00000496103 208 ntBASIC3.69□□□□□ -1.82
VPS72Q15906 AC108210.2-201ENST00000503681 201 ntBASIC3.69□□□□□ -1.82
VPS72Q15906 AC024022.1-202ENST00000508911 394 ntTSL 2 BASIC3.69□□□□□ -1.82
VPS72Q15906 RNU6-307P-201ENST00000516743 106 ntBASIC3.69□□□□□ -1.82
VPS72Q15906 RNU6-264P-201ENST00000517134 104 ntBASIC3.69□□□□□ -1.82
VPS72Q15906 RNU6-1231P-201ENST00000517185 103 ntBASIC3.69□□□□□ -1.82
VPS72Q15906 RNU6-1315P-201ENST00000517187 99 ntBASIC3.69□□□□□ -1.82
VPS72Q15906 RRM2B-207ENST00000519962 201 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
VPS72Q15906 AC025871.1-201ENST00000523935 443 ntTSL 2 BASIC3.69□□□□□ -1.82
VPS72Q15906 AC087463.1-201ENST00000568541 556 ntTSL 2 BASIC3.69□□□□□ -1.82
VPS72Q15906 MIR4782-201ENST00000577987 79 ntBASIC3.69□□□□□ -1.82
VPS72Q15906 AC022809.1-201ENST00000579247 428 ntTSL 3 BASIC3.69□□□□□ -1.82
VPS72Q15906 AC005899.2-201ENST00000584353 90 ntBASIC3.69□□□□□ -1.82
VPS72Q15906 AC012254.1-201ENST00000592747 200 ntTSL 3 BASIC3.69□□□□□ -1.82
VPS72Q15906 7SK.7-201ENST00000603504 247 ntBASIC3.69□□□□□ -1.82
VPS72Q15906 AC241585.2-209ENST00000638217 143 ntBASIC3.69□□□□□ -1.82
VPS72Q15906 OR4C15-202ENST00000642128 951 ntAPPRIS P1 BASIC3.69□□□□□ -1.82
VPS72Q15906 AC110491.1-201ENST00000562191 2010 ntBASIC3.69□□□□□ -1.82
VPS72Q15906 IQCG-205ENST00000455191 1981 ntAPPRIS P1 TSL 2 BASIC3.69□□□□□ -1.82
VPS72Q15906 KNTC1-205ENST00000450485 3655 ntTSL 2 BASIC3.68□□□□□ -1.82
VPS72Q15906 HMGN5-201ENST00000358130 2126 ntAPPRIS P2 TSL 2 BASIC3.68□□□□□ -1.82
VPS72Q15906 HELLS-201ENST00000239026 2740 ntTSL 5 BASIC3.68□□□□□ -1.82
VPS72Q15906 Y_RNA.80-201ENST00000362996 102 ntBASIC3.68□□□□□ -1.82
VPS72Q15906 RNU6-778P-201ENST00000363269 103 ntBASIC3.68□□□□□ -1.82
VPS72Q15906 Y_RNA.149-201ENST00000363558 117 ntBASIC3.68□□□□□ -1.82
VPS72Q15906 Y_RNA.324-201ENST00000365165 102 ntBASIC3.68□□□□□ -1.82
VPS72Q15906 Y_RNA.401-201ENST00000383965 117 ntBASIC3.68□□□□□ -1.82
VPS72Q15906 Y_RNA.452-201ENST00000384202 108 ntBASIC3.68□□□□□ -1.82
VPS72Q15906 RNU6ATAC37P-201ENST00000408328 131 ntBASIC3.68□□□□□ -1.82
VPS72Q15906 MIR1289-2-201ENST00000408360 111 ntBASIC3.68□□□□□ -1.82
VPS72Q15906 RNA5SP247-201ENST00000411181 105 ntBASIC3.68□□□□□ -1.82
VPS72Q15906 AC245291.1-201ENST00000419501 328 ntBASIC3.68□□□□□ -1.82
VPS72Q15906 AL358075.3-201ENST00000426289 226 ntBASIC3.68□□□□□ -1.82
VPS72Q15906 AC007560.1-201ENST00000426912 237 ntBASIC3.68□□□□□ -1.82
VPS72Q15906 AC009414.1-201ENST00000427200 443 ntBASIC3.68□□□□□ -1.82
VPS72Q15906 AC007566.1-201ENST00000427458 643 ntTSL 5 BASIC3.68□□□□□ -1.82
VPS72Q15906 AC096644.2-201ENST00000429278 159 ntBASIC3.68□□□□□ -1.82
VPS72Q15906 LINC02264-201ENST00000442020 576 ntTSL 3 BASIC3.68□□□□□ -1.82
VPS72Q15906 AC008154.1-201ENST00000453087 327 ntTSL 3 BASIC3.68□□□□□ -1.82
VPS72Q15906 MTATP6P7-201ENST00000453315 681 ntBASIC3.68□□□□□ -1.82
VPS72Q15906 PCMTD1P1-201ENST00000455560 355 ntBASIC3.68□□□□□ -1.82
VPS72Q15906 AC004817.2-201ENST00000561794 651 ntBASIC3.68□□□□□ -1.82
VPS72Q15906 AC109446.1-201ENST00000566172 220 ntBASIC3.68□□□□□ -1.82
VPS72Q15906 AC003687.1-201ENST00000578040 427 ntTSL 3 BASIC3.68□□□□□ -1.82
VPS72Q15906 MIR1273C-201ENST00000578669 77 ntBASIC3.68□□□□□ -1.82
VPS72Q15906 AC092447.9-201ENST00000603395 144 ntBASIC3.68□□□□□ -1.82
VPS72Q15906 Z69720.2-201ENST00000624755 279 ntBASIC3.68□□□□□ -1.82
VPS72Q15906 GCNT4-201ENST00000322348 5554 ntAPPRIS P1 BASIC3.68□□□□□ -1.82
VPS72Q15906 SLC30A6-202ENST00000357055 4758 ntTSL 2 BASIC3.68□□□□□ -1.82
VPS72Q15906 NEDD4-208ENST00000508342 7235 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
VPS72Q15906 AL365440.2-201ENST00000419738 2597 ntTSL 2 BASIC3.67□□□□□ -1.82
VPS72Q15906 AC005592.1-201ENST00000566527 1640 ntBASIC3.67□□□□□ -1.82
VPS72Q15906 ABCG2-204ENST00000515655 4276 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
VPS72Q15906 MCMDC2-201ENST00000313616 2043 ntTSL 2 BASIC3.67□□□□□ -1.82
VPS72Q15906 Y_RNA.33-201ENST00000362591 102 ntBASIC3.67□□□□□ -1.82
VPS72Q15906 Y_RNA.47-201ENST00000362697 108 ntBASIC3.67□□□□□ -1.82
VPS72Q15906 RNU1-115P-201ENST00000365329 160 ntBASIC3.67□□□□□ -1.82
VPS72Q15906 Y_RNA.455-201ENST00000384230 98 ntBASIC3.67□□□□□ -1.82
VPS72Q15906 RNU6-505P-201ENST00000384427 107 ntBASIC3.67□□□□□ -1.82
VPS72Q15906 SNORA41-201ENST00000384675 132 ntBASIC3.67□□□□□ -1.82
VPS72Q15906 RNU6ATAC3P-201ENST00000387974 126 ntBASIC3.67□□□□□ -1.82
VPS72Q15906 Y_RNA.645-201ENST00000391229 102 ntBASIC3.67□□□□□ -1.82
VPS72Q15906 RNU6-1025P-201ENST00000410629 104 ntBASIC3.67□□□□□ -1.82
VPS72Q15906 RPS15AP6-201ENST00000420703 385 ntBASIC3.67□□□□□ -1.82
VPS72Q15906 BPY2DP-201ENST00000422208 265 ntBASIC3.67□□□□□ -1.82
VPS72Q15906 LINC01870-201ENST00000427042 390 ntTSL 3 BASIC3.67□□□□□ -1.82
VPS72Q15906 RPL23AP58-201ENST00000440453 469 ntBASIC3.67□□□□□ -1.82
VPS72Q15906 AC009296.1-201ENST00000443146 155 ntBASIC3.67□□□□□ -1.82
VPS72Q15906 AC008571.1-201ENST00000467232 300 ntBASIC3.67□□□□□ -1.82
VPS72Q15906 RNU1-86P-201ENST00000516108 154 ntBASIC3.67□□□□□ -1.82
VPS72Q15906 RNU1-107P-201ENST00000516617 154 ntBASIC3.67□□□□□ -1.82
VPS72Q15906 AC090568.2-205ENST00000518631 576 ntTSL 4 BASIC3.67□□□□□ -1.82
VPS72Q15906 AC022690.2-201ENST00000525673 589 ntTSL 3 BASIC3.67□□□□□ -1.82
VPS72Q15906 AL157871.3-201ENST00000557231 293 ntBASIC3.67□□□□□ -1.82
VPS72Q15906 AC104695.3-201ENST00000604052 296 ntBASIC3.67□□□□□ -1.82
VPS72Q15906 ZCCHC10-202ENST00000355372 2160 ntAPPRIS ALT2 TSL 2 BASIC3.67□□□□□ -1.82
VPS72Q15906 FER-201ENST00000281092 12119 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
VPS72Q15906 OR13G1-202ENST00000642119 2568 ntAPPRIS P1 BASIC3.66□□□□□ -1.82
VPS72Q15906 PRRG1-202ENST00000449135 4481 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
VPS72Q15906 CCSER2-201ENST00000224756 7664 ntAPPRIS P1 TSL 5 BASIC3.66□□□□□ -1.82
VPS72Q15906 IL36B-202ENST00000327407 1052 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
VPS72Q15906 RNA5SP289-201ENST00000362332 137 ntBASIC3.66□□□□□ -1.82
VPS72Q15906 Y_RNA.193-201ENST00000363979 102 ntBASIC3.66□□□□□ -1.82
VPS72Q15906 RNU6-395P-201ENST00000365662 106 ntBASIC3.66□□□□□ -1.82
VPS72Q15906 AL030996.1-201ENST00000411430 235 ntBASIC3.66□□□□□ -1.82
VPS72Q15906 MRLN-201ENST00000414264 422 ntAPPRIS P2 TSL 1 (best) BASIC3.66□□□□□ -1.82
VPS72Q15906 MRPS18CP6-201ENST00000423587 223 ntBASIC3.66□□□□□ -1.82
VPS72Q15906 AL592466.1-201ENST00000428346 307 ntTSL 5 BASIC3.66□□□□□ -1.82
VPS72Q15906 PLCB1-IT1-201ENST00000441231 373 ntTSL 3 BASIC3.66□□□□□ -1.82
VPS72Q15906 AC068781.1-201ENST00000488231 618 ntBASIC3.66□□□□□ -1.82
VPS72Q15906 HMGB1P30-201ENST00000492455 606 ntBASIC3.66□□□□□ -1.82
VPS72Q15906 AC116655.1-201ENST00000508324 901 ntBASIC3.66□□□□□ -1.82
VPS72Q15906 RNU1-143P-201ENST00000516296 146 ntBASIC3.66□□□□□ -1.82
VPS72Q15906 RNU6-572P-201ENST00000516724 80 ntBASIC3.66□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 102.7 ms