Protein–RNA interactions for Protein: Q12789

GTF3C1, General transcription factor 3C polypeptide 1, humanhuman

Predictions only

Length 2,109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1Q12789 MTND5P30-201ENST00000452896 1731 ntBASIC1.82□□□□□ -2.12
GTF3C1Q12789 Y_RNA.4-201ENST00000362333 112 ntBASIC1.82□□□□□ -2.12
GTF3C1Q12789 RNU6-845P-201ENST00000362578 103 ntBASIC1.82□□□□□ -2.12
GTF3C1Q12789 Y_RNA.399-201ENST00000383955 105 ntBASIC1.82□□□□□ -2.12
GTF3C1Q12789 RNU6-43P-201ENST00000384302 107 ntBASIC1.82□□□□□ -2.12
GTF3C1Q12789 SNORA51.11-201ENST00000384442 131 ntBASIC1.82□□□□□ -2.12
GTF3C1Q12789 MIR10A-201ENST00000385043 110 ntBASIC1.82□□□□□ -2.12
GTF3C1Q12789 BTF3L4P2-201ENST00000392798 346 ntBASIC1.82□□□□□ -2.12
GTF3C1Q12789 RNA5SP118-201ENST00000410385 109 ntBASIC1.82□□□□□ -2.12
GTF3C1Q12789 SNORD56-201ENST00000413522 71 ntBASIC1.82□□□□□ -2.12
GTF3C1Q12789 CYCSP33-201ENST00000414485 327 ntBASIC1.82□□□□□ -2.12
GTF3C1Q12789 AC007314.1-201ENST00000414538 565 ntTSL 4 BASIC1.82□□□□□ -2.12
GTF3C1Q12789 AL035258.1-201ENST00000439450 439 ntTSL 3 BASIC1.82□□□□□ -2.12
GTF3C1Q12789 AL359771.1-201ENST00000441809 379 ntTSL 5 BASIC1.82□□□□□ -2.12
GTF3C1Q12789 AC004936.1-201ENST00000451755 361 ntTSL 3 BASIC1.82□□□□□ -2.12
GTF3C1Q12789 AL034345.2-203ENST00000453417 383 ntTSL 3 BASIC1.82□□□□□ -2.12
GTF3C1Q12789 AC013470.1-201ENST00000453438 462 ntBASIC1.82□□□□□ -2.12
GTF3C1Q12789 AC074033.2-201ENST00000480669 535 ntTSL 3 BASIC1.82□□□□□ -2.12
GTF3C1Q12789 LINC00971-201ENST00000482721 535 ntTSL 2 BASIC1.82□□□□□ -2.12
GTF3C1Q12789 LNX1-AS1-203ENST00000511989 488 ntTSL 2 BASIC1.82□□□□□ -2.12
GTF3C1Q12789 RN7SKP256-201ENST00000517201 314 ntBASIC1.82□□□□□ -2.12
GTF3C1Q12789 HSPE1P18-201ENST00000517602 280 ntBASIC1.82□□□□□ -2.12
GTF3C1Q12789 IL7-206ENST00000520269 456 ntTSL 3 BASIC1.82□□□□□ -2.12
GTF3C1Q12789 AC009120.5-201ENST00000561669 475 ntTSL 5 BASIC1.82□□□□□ -2.12
GTF3C1Q12789 AC092325.1-201ENST00000566449 554 ntBASIC1.82□□□□□ -2.12
GTF3C1Q12789 AC103810.1-201ENST00000579873 453 ntBASIC1.82□□□□□ -2.12
GTF3C1Q12789 BNIP3P16-201ENST00000589779 534 ntBASIC1.82□□□□□ -2.12
GTF3C1Q12789 AC092747.3-201ENST00000603769 301 ntBASIC1.82□□□□□ -2.12
GTF3C1Q12789 AP3S1-209ENST00000640413 489 ntTSL 5 BASIC1.82□□□□□ -2.12
GTF3C1Q12789 NETO1-202ENST00000397929 1849 ntTSL 1 (best) BASIC1.82□□□□□ -2.12
GTF3C1Q12789 OR4G1P-203ENST00000641984 1631 ntBASIC1.81□□□□□ -2.12
GTF3C1Q12789 RNA5SP240-201ENST00000365355 128 ntBASIC1.81□□□□□ -2.12
GTF3C1Q12789 DEFB110-202ENST00000393660 189 ntAPPRIS ALT2 TSL 1 (best) BASIC1.81□□□□□ -2.12
GTF3C1Q12789 LINC01710-201ENST00000446002 390 ntTSL 5 BASIC1.81□□□□□ -2.12
GTF3C1Q12789 GZMAP1-201ENST00000503054 631 ntBASIC1.81□□□□□ -2.12
GTF3C1Q12789 AC110009.1-201ENST00000512965 451 ntTSL 5 BASIC1.81□□□□□ -2.12
GTF3C1Q12789 RNU6-358P-201ENST00000516564 75 ntBASIC1.81□□□□□ -2.12
GTF3C1Q12789 AC025524.1-201ENST00000518489 606 ntTSL 4 BASIC1.81□□□□□ -2.12
GTF3C1Q12789 AC103853.2-201ENST00000519805 716 ntTSL 3 BASIC1.81□□□□□ -2.12
GTF3C1Q12789 C8orf59-212ENST00000615697 483 ntAPPRIS P1 TSL 2 BASIC1.81□□□□□ -2.12
GTF3C1Q12789 ZNF85-203ENST00000345030 1689 ntAPPRIS ALT2 TSL 5 BASIC1.81□□□□□ -2.12
GTF3C1Q12789 MTND4P27-201ENST00000450813 1354 ntBASIC1.81□□□□□ -2.12
GTF3C1Q12789 LRIF1-203ENST00000494675 1912 ntAPPRIS ALT2 TSL 2 BASIC1.81□□□□□ -2.12
GTF3C1Q12789 Y_RNA.151-201ENST00000363566 112 ntBASIC1.81□□□□□ -2.12
GTF3C1Q12789 RNA5SP138-201ENST00000365098 114 ntBASIC1.81□□□□□ -2.12
GTF3C1Q12789 RNU6-190P-201ENST00000384154 102 ntBASIC1.81□□□□□ -2.12
GTF3C1Q12789 RNU6-541P-201ENST00000384709 110 ntBASIC1.81□□□□□ -2.12
GTF3C1Q12789 TRAJ40-201ENST00000390497 61 ntAPPRIS P1 BASIC1.81□□□□□ -2.12
GTF3C1Q12789 AC074117.2-201ENST00000417130 397 ntBASIC1.81□□□□□ -2.12
GTF3C1Q12789 AL513185.2-201ENST00000425543 193 ntBASIC1.81□□□□□ -2.12
GTF3C1Q12789 AL669831.1-202ENST00000428504 417 ntBASIC1.81□□□□□ -2.12
GTF3C1Q12789 AC092573.2-202ENST00000437243 336 ntTSL 3 BASIC1.81□□□□□ -2.12
GTF3C1Q12789 RPL31P58-201ENST00000469001 379 ntBASIC1.81□□□□□ -2.12
GTF3C1Q12789 AC087884.1-201ENST00000469738 328 ntBASIC1.81□□□□□ -2.12
GTF3C1Q12789 HMGN1P12-201ENST00000499125 195 ntBASIC1.81□□□□□ -2.12
GTF3C1Q12789 AC008628.2-201ENST00000502605 298 ntBASIC1.81□□□□□ -2.12
GTF3C1Q12789 SNORA31.18-201ENST00000517043 134 ntBASIC1.81□□□□□ -2.12
GTF3C1Q12789 RNA5SP503-201ENST00000517047 117 ntBASIC1.81□□□□□ -2.12
GTF3C1Q12789 AC026765.1-201ENST00000547876 435 ntTSL 3 BASIC1.81□□□□□ -2.12
GTF3C1Q12789 AC121758.2-201ENST00000553271 193 ntBASIC1.81□□□□□ -2.12
GTF3C1Q12789 AL118558.2-201ENST00000556294 238 ntBASIC1.81□□□□□ -2.12
GTF3C1Q12789 MIR4498-201ENST00000577599 66 ntBASIC1.81□□□□□ -2.12
GTF3C1Q12789 B3GNTL1P2-201ENST00000603673 288 ntBASIC1.81□□□□□ -2.12
GTF3C1Q12789 FAM157A-202ENST00000615155 405 ntBASIC1.81□□□□□ -2.12
GTF3C1Q12789 AC103705.1-201ENST00000619013 241 ntBASIC1.81□□□□□ -2.12
GTF3C1Q12789 MIR7515-201ENST00000637837 67 ntBASIC1.81□□□□□ -2.12
GTF3C1Q12789 U4.7-201ENST00000638126 106 ntBASIC1.81□□□□□ -2.12
GTF3C1Q12789 CSNK1G3-202ENST00000360683 4047 ntAPPRIS ALT2 TSL 1 (best) BASIC1.8□□□□□ -2.12
GTF3C1Q12789 SNORA32.2-201ENST00000384049 122 ntBASIC1.8□□□□□ -2.12
GTF3C1Q12789 RNU6-622P-201ENST00000384272 103 ntBASIC1.8□□□□□ -2.12
GTF3C1Q12789 SNORA16.2-201ENST00000390991 127 ntBASIC1.8□□□□□ -2.12
GTF3C1Q12789 SNORA67.5-201ENST00000391036 107 ntBASIC1.8□□□□□ -2.12
GTF3C1Q12789 AC009414.1-201ENST00000427200 443 ntBASIC1.8□□□□□ -2.12
GTF3C1Q12789 AC243964.1-201ENST00000441814 261 ntBASIC1.8□□□□□ -2.12
GTF3C1Q12789 SCARNA18-201ENST00000459004 134 ntBASIC1.8□□□□□ -2.12
GTF3C1Q12789 RPL30P12-201ENST00000474666 353 ntBASIC1.8□□□□□ -2.12
GTF3C1Q12789 RPL23AP70-201ENST00000483361 460 ntBASIC1.8□□□□□ -2.12
GTF3C1Q12789 AC116353.2-201ENST00000505332 712 ntBASIC1.8□□□□□ -2.12
GTF3C1Q12789 PRELID2P1-201ENST00000552837 301 ntBASIC1.8□□□□□ -2.12
GTF3C1Q12789 RBBP8-210ENST00000581687 617 ntTSL 2 BASIC1.8□□□□□ -2.12
GTF3C1Q12789 AP000942.3-201ENST00000603702 160 ntBASIC1.8□□□□□ -2.12
GTF3C1Q12789 AC123912.5-201ENST00000605470 343 ntBASIC1.8□□□□□ -2.12
GTF3C1Q12789 AL160287.1-202ENST00000638113 454 ntTSL 5 BASIC1.8□□□□□ -2.12
GTF3C1Q12789 RGS22-214ENST00000523287 4033 ntAPPRIS ALT2 TSL 2 BASIC1.8□□□□□ -2.12
GTF3C1Q12789 OR2L2-202ENST00000641771 4300 ntAPPRIS P1 BASIC1.8□□□□□ -2.12
GTF3C1Q12789 Y_RNA.226-201ENST00000364337 114 ntBASIC1.79□□□□□ -2.12
GTF3C1Q12789 RNU6-715P-201ENST00000365204 103 ntBASIC1.79□□□□□ -2.12
GTF3C1Q12789 MIR9-3-201ENST00000385084 90 ntBASIC1.79□□□□□ -2.12
GTF3C1Q12789 EIF4E2P1-201ENST00000393781 255 ntBASIC1.79□□□□□ -2.12
GTF3C1Q12789 RNU6ATAC38P-201ENST00000408119 126 ntBASIC1.79□□□□□ -2.12
GTF3C1Q12789 AC114501.3-201ENST00000453648 164 ntTSL 5 BASIC1.79□□□□□ -2.12
GTF3C1Q12789 AL441985.1-201ENST00000457727 251 ntBASIC1.79□□□□□ -2.12
GTF3C1Q12789 AC117462.1-201ENST00000461186 554 ntTSL 4 BASIC1.79□□□□□ -2.12
GTF3C1Q12789 AC096736.2-201ENST00000507972 175 ntTSL 3 BASIC1.79□□□□□ -2.12
GTF3C1Q12789 RNU2-69P-201ENST00000516061 100 ntBASIC1.79□□□□□ -2.12
GTF3C1Q12789 Y_RNA.665-201ENST00000516177 98 ntBASIC1.79□□□□□ -2.12
GTF3C1Q12789 RNU4ATAC8P-201ENST00000516196 109 ntBASIC1.79□□□□□ -2.12
GTF3C1Q12789 RNU6-567P-201ENST00000516746 107 ntBASIC1.79□□□□□ -2.12
GTF3C1Q12789 AC124290.1-202ENST00000523342 387 ntTSL 3 BASIC1.79□□□□□ -2.12
GTF3C1Q12789 AC023824.2-201ENST00000566185 400 ntBASIC1.79□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 182.1 ms