Protein–RNA interactions for Protein: Q07065

CKAP4, Cytoskeleton-associated protein 4, humanhuman

Known RBP Predictions only

Length 602 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP4Q07065 RNU2-44P-201ENST00000516795 194 ntBASIC1.92□□□□□ -2.1
CKAP4Q07065 ZNF436-AS1-205ENST00000518600 376 ntTSL 5 BASIC1.92□□□□□ -2.1
CKAP4Q07065 AC107953.1-201ENST00000522216 297 ntBASIC1.92□□□□□ -2.1
CKAP4Q07065 AP000462.2-203ENST00000540545 715 ntTSL 5 BASIC1.92□□□□□ -2.1
CKAP4Q07065 AC092747.1-202ENST00000540595 380 ntTSL 5 BASIC1.92□□□□□ -2.1
CKAP4Q07065 AC011939.2-201ENST00000567396 428 ntTSL 3 BASIC1.92□□□□□ -2.1
CKAP4Q07065 AC007631.1-201ENST00000578545 189 ntTSL 3 BASIC1.92□□□□□ -2.1
CKAP4Q07065 AC011712.1-201ENST00000588959 234 ntBASIC1.92□□□□□ -2.1
CKAP4Q07065 AC097467.3-205ENST00000597955 594 ntTSL 5 BASIC1.92□□□□□ -2.1
CKAP4Q07065 CTHRC1P1-201ENST00000605383 469 ntBASIC1.92□□□□□ -2.1
CKAP4Q07065 AC002044.1-201ENST00000606707 158 ntBASIC1.92□□□□□ -2.1
CKAP4Q07065 AL008636.1-201ENST00000625038 1018 ntBASIC1.92□□□□□ -2.1
CKAP4Q07065 MIR219B-201ENST00000637023 88 ntBASIC1.92□□□□□ -2.1
CKAP4Q07065 GYPB-216ENST00000638448 363 ntAPPRIS P1 TSL 1 (best) BASIC1.92□□□□□ -2.1
CKAP4Q07065 PI15-201ENST00000260113 6732 ntAPPRIS P1 TSL 1 (best) BASIC1.91□□□□□ -2.1
CKAP4Q07065 RNU6-845P-201ENST00000362578 103 ntBASIC1.91□□□□□ -2.1
CKAP4Q07065 RNU6-254P-201ENST00000363377 107 ntBASIC1.91□□□□□ -2.1
CKAP4Q07065 RNU6-525P-201ENST00000363685 104 ntBASIC1.91□□□□□ -2.1
CKAP4Q07065 SNORD113-7-201ENST00000363762 77 ntBASIC1.91□□□□□ -2.1
CKAP4Q07065 SNORD48-201ENST00000364953 64 ntBASIC1.91□□□□□ -2.1
CKAP4Q07065 Y_RNA.324-201ENST00000365165 102 ntBASIC1.91□□□□□ -2.1
CKAP4Q07065 Y_RNA.373-201ENST00000365600 103 ntBASIC1.91□□□□□ -2.1
CKAP4Q07065 Y_RNA.414-201ENST00000384011 101 ntBASIC1.91□□□□□ -2.1
CKAP4Q07065 RNU6-767P-201ENST00000384132 107 ntBASIC1.91□□□□□ -2.1
CKAP4Q07065 RNU6-831P-201ENST00000384548 107 ntBASIC1.91□□□□□ -2.1
CKAP4Q07065 MIR518D-201ENST00000385014 87 ntBASIC1.91□□□□□ -2.1
CKAP4Q07065 RNU6-750P-201ENST00000390946 107 ntBASIC1.91□□□□□ -2.1
CKAP4Q07065 OPRPN-201ENST00000399575 1040 ntAPPRIS P1 TSL 1 (best) BASIC1.91□□□□□ -2.1
CKAP4Q07065 MORN2-203ENST00000409131 544 ntTSL 5 BASIC1.91□□□□□ -2.1
CKAP4Q07065 RNU2-49P-201ENST00000410666 184 ntBASIC1.91□□□□□ -2.1
CKAP4Q07065 LINC01853-201ENST00000417715 444 ntTSL 3 BASIC1.91□□□□□ -2.1
CKAP4Q07065 U51244.1-201ENST00000423120 374 ntTSL 3 BASIC1.91□□□□□ -2.1
CKAP4Q07065 EIF4EP4-201ENST00000424916 578 ntBASIC1.91□□□□□ -2.1
CKAP4Q07065 AL356320.1-201ENST00000429616 163 ntBASIC1.91□□□□□ -2.1
CKAP4Q07065 AL445646.1-201ENST00000431784 216 ntBASIC1.91□□□□□ -2.1
CKAP4Q07065 MICF-203ENST00000432679 129 ntBASIC1.91□□□□□ -2.1
CKAP4Q07065 IFNA20P-201ENST00000436840 528 ntBASIC1.91□□□□□ -2.1
CKAP4Q07065 AC110995.1-201ENST00000444185 628 ntTSL 3 BASIC1.91□□□□□ -2.1
CKAP4Q07065 MTND5P20-201ENST00000448677 143 ntBASIC1.91□□□□□ -2.1
CKAP4Q07065 RPL26P9-201ENST00000457466 433 ntBASIC1.91□□□□□ -2.1
CKAP4Q07065 RNU6-329P-201ENST00000459618 107 ntBASIC1.91□□□□□ -2.1
CKAP4Q07065 TRBVA-201ENST00000498804 316 ntBASIC1.91□□□□□ -2.1
CKAP4Q07065 AC114781.4-201ENST00000513707 639 ntBASIC1.91□□□□□ -2.1
CKAP4Q07065 RN7SKP256-201ENST00000517201 314 ntBASIC1.91□□□□□ -2.1
CKAP4Q07065 AC011092.2-201ENST00000533659 586 ntTSL 1 (best) BASIC1.91□□□□□ -2.1
CKAP4Q07065 AP001783.1-202ENST00000534620 408 ntTSL 2 BASIC1.91□□□□□ -2.1
CKAP4Q07065 AC011611.2-201ENST00000549888 358 ntTSL 3 BASIC1.91□□□□□ -2.1
CKAP4Q07065 NACAP3-201ENST00000552100 481 ntBASIC1.91□□□□□ -2.1
CKAP4Q07065 AL121821.1-201ENST00000557067 530 ntTSL 3 BASIC1.91□□□□□ -2.1
CKAP4Q07065 MIR4782-201ENST00000577987 79 ntBASIC1.91□□□□□ -2.1
CKAP4Q07065 MIR3199-1-201ENST00000582434 88 ntBASIC1.91□□□□□ -2.1
CKAP4Q07065 MIR5692C1-201ENST00000585309 91 ntBASIC1.91□□□□□ -2.1
CKAP4Q07065 UBE2V2P2-201ENST00000587677 504 ntBASIC1.91□□□□□ -2.1
CKAP4Q07065 AC087045.1-201ENST00000605856 382 ntBASIC1.91□□□□□ -2.1
CKAP4Q07065 HTN1-205ENST00000610341 536 ntAPPRIS P1 TSL 1 (best) BASIC1.91□□□□□ -2.1
CKAP4Q07065 DAOA-AS1_2.1-201ENST00000614829 187 ntBASIC1.91□□□□□ -2.1
CKAP4Q07065 FAM157A-202ENST00000615155 405 ntBASIC1.91□□□□□ -2.1
CKAP4Q07065 MIR6134-201ENST00000617606 109 ntBASIC1.91□□□□□ -2.1
CKAP4Q07065 AC009248.2-201ENST00000619826 254 ntBASIC1.91□□□□□ -2.1
CKAP4Q07065 LINC01002-202ENST00000631412 459 ntTSL 5 BASIC1.91□□□□□ -2.1
CKAP4Q07065 ZBBX-202ENST00000392764 2849 ntAPPRIS ALT2 TSL 1 (best) BASIC1.91□□□□□ -2.1
CKAP4Q07065 AC110491.1-201ENST00000562191 2010 ntBASIC1.91□□□□□ -2.1
CKAP4Q07065 PYGO1-201ENST00000302000 8488 ntTSL 1 (best) BASIC1.91□□□□□ -2.1
CKAP4Q07065 ZNF355P-201ENST00000427301 3216 ntBASIC1.91□□□□□ -2.1
CKAP4Q07065 SIRT1-203ENST00000406900 3295 ntTSL 2 BASIC1.9□□□□□ -2.1
CKAP4Q07065 CDC27P3-201ENST00000635418 1910 ntBASIC1.9□□□□□ -2.11
CKAP4Q07065 Y_RNA.212-201ENST00000364177 102 ntBASIC1.9□□□□□ -2.11
CKAP4Q07065 RNU6-867P-201ENST00000364956 107 ntBASIC1.9□□□□□ -2.11
CKAP4Q07065 RNU6-658P-201ENST00000384606 106 ntBASIC1.9□□□□□ -2.11
CKAP4Q07065 SNORA64-201ENST00000384674 134 ntBASIC1.9□□□□□ -2.11
CKAP4Q07065 RNU6-510P-201ENST00000391239 108 ntBASIC1.9□□□□□ -2.11
CKAP4Q07065 RN7SKP32-201ENST00000410167 303 ntBASIC1.9□□□□□ -2.11
CKAP4Q07065 PDCL2P1-201ENST00000419302 352 ntBASIC1.9□□□□□ -2.11
CKAP4Q07065 RPL23AP83-201ENST00000434984 473 ntBASIC1.9□□□□□ -2.11
CKAP4Q07065 AC091133.1-201ENST00000435491 483 ntTSL 3 BASIC1.9□□□□□ -2.11
CKAP4Q07065 AL136234.1-201ENST00000437080 349 ntTSL 2 BASIC1.9□□□□□ -2.11
CKAP4Q07065 HMGN2P10-201ENST00000448085 265 ntBASIC1.9□□□□□ -2.11
CKAP4Q07065 AC114501.3-201ENST00000453648 164 ntTSL 5 BASIC1.9□□□□□ -2.11
CKAP4Q07065 AC068781.1-201ENST00000488231 618 ntBASIC1.9□□□□□ -2.11
CKAP4Q07065 AC091951.2-201ENST00000500762 203 ntBASIC1.9□□□□□ -2.11
CKAP4Q07065 AC097467.3-212ENST00000512269 568 ntTSL 3 BASIC1.9□□□□□ -2.11
CKAP4Q07065 LIAS-206ENST00000513731 826 ntTSL 5 BASIC1.9□□□□□ -2.11
CKAP4Q07065 SNORA19.2-201ENST00000516013 114 ntBASIC1.9□□□□□ -2.11
CKAP4Q07065 RNU6-864P-201ENST00000516256 108 ntBASIC1.9□□□□□ -2.11
CKAP4Q07065 AC069120.1-201ENST00000521623 379 ntTSL 3 BASIC1.9□□□□□ -2.11
CKAP4Q07065 AC026765.1-201ENST00000547876 435 ntTSL 3 BASIC1.9□□□□□ -2.11
CKAP4Q07065 LINC00933-203ENST00000559812 219 ntBASIC1.9□□□□□ -2.11
CKAP4Q07065 AC099518.4-202ENST00000576433 455 ntTSL 2 BASIC1.9□□□□□ -2.11
CKAP4Q07065 AC005730.3-201ENST00000583067 366 ntBASIC1.9□□□□□ -2.11
CKAP4Q07065 AC011477.3-201ENST00000585571 403 ntTSL 5 BASIC1.9□□□□□ -2.11
CKAP4Q07065 MTND4LP5-201ENST00000605152 292 ntBASIC1.9□□□□□ -2.11
CKAP4Q07065 AC005000.2-201ENST00000605468 310 ntBASIC1.9□□□□□ -2.11
CKAP4Q07065 LARP7P1-201ENST00000605576 316 ntBASIC1.9□□□□□ -2.11
CKAP4Q07065 AL121757.2-201ENST00000611223 313 ntBASIC1.9□□□□□ -2.11
CKAP4Q07065 CDKN3-212ENST00000620759 196 ntTSL 5 BASIC1.9□□□□□ -2.11
CKAP4Q07065 Z69720.2-201ENST00000624755 279 ntBASIC1.9□□□□□ -2.11
CKAP4Q07065 U6.99-201ENST00000637524 83 ntBASIC1.9□□□□□ -2.11
CKAP4Q07065 PCDH11Y-203ENST00000362095 4220 ntAPPRIS ALT2 TSL 1 (best) BASIC1.9□□□□□ -2.11
CKAP4Q07065 EMCN-202ENST00000305864 1575 ntTSL 1 (best) BASIC1.89□□□□□ -2.11
CKAP4Q07065 ATP8A2P2-201ENST00000437678 1568 ntBASIC1.89□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 153.3 ms