Protein–RNA interactions for Protein: Q00978

IRF9, Interferon regulatory factor 9, humanhuman

Predictions only

Length 393 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IRF9Q00978 ZBBX-202ENST00000392764 2849 ntAPPRIS ALT2 TSL 1 (best) BASIC3.41□□□□□ -1.86
IRF9Q00978 RNU6-1159P-201ENST00000362933 107 ntBASIC3.41□□□□□ -1.86
IRF9Q00978 RNU6-137P-201ENST00000363680 108 ntBASIC3.41□□□□□ -1.86
IRF9Q00978 Y_RNA.288-201ENST00000364854 92 ntBASIC3.41□□□□□ -1.86
IRF9Q00978 CLDN10-202ENST00000376855 701 ntTSL 2 BASIC3.41□□□□□ -1.86
IRF9Q00978 Y_RNA.439-201ENST00000384119 94 ntBASIC3.41□□□□□ -1.86
IRF9Q00978 TRAV34-201ENST00000390461 349 ntAPPRIS P1 BASIC3.41□□□□□ -1.86
IRF9Q00978 TRAJ17-201ENST00000390520 63 ntAPPRIS P1 BASIC3.41□□□□□ -1.86
IRF9Q00978 RNA5SP213-201ENST00000391031 106 ntBASIC3.41□□□□□ -1.86
IRF9Q00978 PTMAP2-201ENST00000397627 327 ntBASIC3.41□□□□□ -1.86
IRF9Q00978 MS4A4E-202ENST00000398986 522 ntAPPRIS P1 TSL 5 BASIC3.41□□□□□ -1.86
IRF9Q00978 AC012306.1-201ENST00000423267 114 ntBASIC3.41□□□□□ -1.86
IRF9Q00978 RPS15AP7-201ENST00000439294 405 ntBASIC3.41□□□□□ -1.86
IRF9Q00978 TRAPPC2P8-201ENST00000440676 396 ntBASIC3.41□□□□□ -1.86
IRF9Q00978 AP000705.1-201ENST00000454567 350 ntBASIC3.41□□□□□ -1.86
IRF9Q00978 AC012081.1-201ENST00000462382 477 ntTSL 3 BASIC3.41□□□□□ -1.86
IRF9Q00978 CENPBD1P1-201ENST00000464061 469 ntBASIC3.41□□□□□ -1.86
IRF9Q00978 AC090525.1-201ENST00000479116 478 ntBASIC3.41□□□□□ -1.86
IRF9Q00978 RN7SL283P-201ENST00000489055 303 ntBASIC3.41□□□□□ -1.86
IRF9Q00978 GZMAP1-201ENST00000503054 631 ntBASIC3.41□□□□□ -1.86
IRF9Q00978 AC025465.3-201ENST00000510570 311 ntBASIC3.41□□□□□ -1.86
IRF9Q00978 SNORA70.14-201ENST00000516205 110 ntBASIC3.41□□□□□ -1.86
IRF9Q00978 RNU6-567P-201ENST00000516746 107 ntBASIC3.41□□□□□ -1.86
IRF9Q00978 RNU6-711P-201ENST00000517255 106 ntBASIC3.41□□□□□ -1.86
IRF9Q00978 AC104393.1-201ENST00000517495 255 ntTSL 3 BASIC3.41□□□□□ -1.86
IRF9Q00978 AP005436.2-201ENST00000528458 252 ntTSL 5 BASIC3.41□□□□□ -1.86
IRF9Q00978 AP003733.2-201ENST00000529409 171 ntBASIC3.41□□□□□ -1.86
IRF9Q00978 AC007619.1-201ENST00000544086 412 ntTSL 5 BASIC3.41□□□□□ -1.86
IRF9Q00978 AC093023.1-201ENST00000547375 507 ntBASIC3.41□□□□□ -1.86
IRF9Q00978 AL122017.1-202ENST00000570612 319 ntTSL 5 BASIC3.41□□□□□ -1.86
IRF9Q00978 AC127024.3-201ENST00000582841 460 ntTSL 3 BASIC3.41□□□□□ -1.86
IRF9Q00978 AC012493.2-201ENST00000595083 291 ntBASIC3.41□□□□□ -1.86
IRF9Q00978 AL078605.1-201ENST00000603529 500 ntBASIC3.41□□□□□ -1.86
IRF9Q00978 MAGI2-AS3-224ENST00000619135 205 ntTSL 5 BASIC3.41□□□□□ -1.86
IRF9Q00978 NDST3-201ENST00000296499 5961 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
IRF9Q00978 NUFIP2-201ENST00000225388 10850 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
IRF9Q00978 SULT1B1-201ENST00000310613 7115 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
IRF9Q00978 ABCD2-201ENST00000308666 6238 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.86
IRF9Q00978 RNU6-212P-201ENST00000362642 104 ntBASIC3.4□□□□□ -1.87
IRF9Q00978 RNU6-1010P-201ENST00000362757 107 ntBASIC3.4□□□□□ -1.87
IRF9Q00978 Y_RNA.105-201ENST00000363182 111 ntBASIC3.4□□□□□ -1.87
IRF9Q00978 RNA5SP197-201ENST00000363357 119 ntBASIC3.4□□□□□ -1.87
IRF9Q00978 RNU6-879P-201ENST00000364328 108 ntBASIC3.4□□□□□ -1.87
IRF9Q00978 SNORA14A-201ENST00000364773 135 ntBASIC3.4□□□□□ -1.87
IRF9Q00978 SNORD6-201ENST00000365444 73 ntBASIC3.4□□□□□ -1.87
IRF9Q00978 MIR487A-201ENST00000385009 80 ntBASIC3.4□□□□□ -1.87
IRF9Q00978 MT-TW-201ENST00000387382 68 ntBASIC3.4□□□□□ -1.87
IRF9Q00978 MIR670-201ENST00000390142 98 ntBASIC3.4□□□□□ -1.87
IRF9Q00978 MIR767-201ENST00000390228 109 ntBASIC3.4□□□□□ -1.87
IRF9Q00978 RPS26P42-201ENST00000413485 326 ntBASIC3.4□□□□□ -1.87
IRF9Q00978 SETP5-201ENST00000437270 562 ntBASIC3.4□□□□□ -1.87
IRF9Q00978 AC096638.1-201ENST00000444678 216 ntBASIC3.4□□□□□ -1.87
IRF9Q00978 AL020994.3-201ENST00000449126 274 ntTSL 3 BASIC3.4□□□□□ -1.87
IRF9Q00978 RNU6-408P-201ENST00000515910 100 ntBASIC3.4□□□□□ -1.87
IRF9Q00978 RNU6ATAC13P-201ENST00000516152 131 ntBASIC3.4□□□□□ -1.87
IRF9Q00978 RNU2-53P-201ENST00000516257 147 ntBASIC3.4□□□□□ -1.87
IRF9Q00978 RNU6-1012P-201ENST00000516606 109 ntBASIC3.4□□□□□ -1.87
IRF9Q00978 RNU6-1198P-201ENST00000516904 67 ntBASIC3.4□□□□□ -1.87
IRF9Q00978 AC107934.2-201ENST00000518653 310 ntBASIC3.4□□□□□ -1.87
IRF9Q00978 OOSP2-203ENST00000532905 496 ntAPPRIS ALT2 TSL 3 BASIC3.4□□□□□ -1.87
IRF9Q00978 MIR3136-201ENST00000583498 78 ntBASIC3.4□□□□□ -1.87
IRF9Q00978 AC022335.1-204ENST00000590779 600 ntAPPRIS ALT2 TSL 2 BASIC3.4□□□□□ -1.87
IRF9Q00978 AL137843.1-201ENST00000605078 385 ntBASIC3.4□□□□□ -1.87
IRF9Q00978 AC069200.1-201ENST00000609511 323 ntBASIC3.4□□□□□ -1.87
IRF9Q00978 DLEU1_1.1-201ENST00000618107 190 ntBASIC3.4□□□□□ -1.87
IRF9Q00978 CR392039.5-201ENST00000623201 510 ntBASIC3.4□□□□□ -1.87
IRF9Q00978 SNORD98-201ENST00000636377 67 ntBASIC3.4□□□□□ -1.87
IRF9Q00978 U6.104-201ENST00000637979 90 ntBASIC3.4□□□□□ -1.87
IRF9Q00978 CHD9-213ENST00000564845 11504 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
IRF9Q00978 N4BP2L2-205ENST00000446957 2071 ntTSL 5 BASIC3.4□□□□□ -1.87
IRF9Q00978 AC093908.1-201ENST00000623125 8092 ntBASIC3.4□□□□□ -1.87
IRF9Q00978 USP9Y-201ENST00000338981 10036 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
IRF9Q00978 AC128685.1-201ENST00000490357 1834 ntTSL 5 BASIC3.4□□□□□ -1.87
IRF9Q00978 MBNL3-204ENST00000370853 2661 ntAPPRIS P4 TSL 1 (best) BASIC3.39□□□□□ -1.87
IRF9Q00978 AL161457.2-203ENST00000590767 2663 ntTSL 5 BASIC3.39□□□□□ -1.87
IRF9Q00978 MFSD8-233ENST00000641482 4860 ntBASIC3.39□□□□□ -1.87
IRF9Q00978 MGAT4C-211ENST00000621808 2582 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
IRF9Q00978 CSNK1G3-203ENST00000361991 2424 ntAPPRIS P3 TSL 1 (best) BASIC3.39□□□□□ -1.87
IRF9Q00978 SOCS4-201ENST00000339298 6667 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
IRF9Q00978 RNU1-105P-201ENST00000363470 161 ntBASIC3.39□□□□□ -1.87
IRF9Q00978 SNORD115-8-201ENST00000363856 82 ntBASIC3.39□□□□□ -1.87
IRF9Q00978 SNORD115-38-201ENST00000365037 82 ntBASIC3.39□□□□□ -1.87
IRF9Q00978 Y_RNA.376-201ENST00000365638 108 ntBASIC3.39□□□□□ -1.87
IRF9Q00978 Y_RNA.476-201ENST00000384347 108 ntBASIC3.39□□□□□ -1.87
IRF9Q00978 Y_RNA.483-201ENST00000384380 101 ntBASIC3.39□□□□□ -1.87
IRF9Q00978 MIR10B-201ENST00000385011 110 ntBASIC3.39□□□□□ -1.87
IRF9Q00978 U3.19-201ENST00000390893 196 ntBASIC3.39□□□□□ -1.87
IRF9Q00978 RNU6-121P-201ENST00000410525 99 ntBASIC3.39□□□□□ -1.87
IRF9Q00978 AL358075.3-201ENST00000426289 226 ntBASIC3.39□□□□□ -1.87
IRF9Q00978 TAB3-AS1-201ENST00000428263 245 ntTSL 5 BASIC3.39□□□□□ -1.87
IRF9Q00978 GOT2P5-201ENST00000433995 546 ntBASIC3.39□□□□□ -1.87
IRF9Q00978 RPL23AP62-201ENST00000463396 453 ntBASIC3.39□□□□□ -1.87
IRF9Q00978 RN7SL442P-201ENST00000473804 320 ntBASIC3.39□□□□□ -1.87
IRF9Q00978 RNU6-58P-201ENST00000517143 103 ntBASIC3.39□□□□□ -1.87
IRF9Q00978 LINC02309-201ENST00000553679 207 ntTSL 3 BASIC3.39□□□□□ -1.87
IRF9Q00978 Y_RNA.772-201ENST00000606692 102 ntBASIC3.39□□□□□ -1.87
IRF9Q00978 AL391261.4-201ENST00000616012 481 ntBASIC3.39□□□□□ -1.87
IRF9Q00978 DOCK7-202ENST00000340370 6731 ntAPPRIS P3 TSL 2 BASIC3.39□□□□□ -1.87
IRF9Q00978 C6orf10-202ENST00000375015 2173 ntAPPRIS ALT2 TSL 5 BASIC3.39□□□□□ -1.87
IRF9Q00978 KIAA0586-215ENST00000619722 5597 ntAPPRIS ALT2 TSL 2 BASIC3.39□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 103.8 ms