Protein–RNA interactions for Protein: P78406

RAE1, mRNA export factor, humanhuman

Known RBP Predictions only

Length 368 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAE1P78406 SNORA26.3-201ENST00000391119 136 ntBASIC2.85□□□□□ -1.95
RAE1P78406 SNORA48.7-201ENST00000391302 135 ntBASIC2.85□□□□□ -1.95
RAE1P78406 MRPL42P3-201ENST00000401492 326 ntBASIC2.85□□□□□ -1.95
RAE1P78406 RNU6-1156P-201ENST00000410365 100 ntBASIC2.85□□□□□ -1.95
RAE1P78406 RNU2-23P-201ENST00000410545 195 ntBASIC2.85□□□□□ -1.95
RAE1P78406 RN7SKP220-201ENST00000410611 288 ntBASIC2.85□□□□□ -1.95
RAE1P78406 AC007098.1-201ENST00000420122 367 ntBASIC2.85□□□□□ -1.95
RAE1P78406 OSTCP8-201ENST00000445117 448 ntBASIC2.85□□□□□ -1.95
RAE1P78406 AL354949.1-201ENST00000446438 170 ntTSL 2 BASIC2.85□□□□□ -1.95
RAE1P78406 AC008154.1-201ENST00000453087 327 ntTSL 3 BASIC2.85□□□□□ -1.95
RAE1P78406 AC104564.1-201ENST00000493028 407 ntBASIC2.85□□□□□ -1.95
RAE1P78406 AC008885.1-201ENST00000514930 301 ntBASIC2.85□□□□□ -1.95
RAE1P78406 RNU6-475P-201ENST00000516073 104 ntBASIC2.85□□□□□ -1.95
RAE1P78406 RNU6-327P-201ENST00000516270 127 ntBASIC2.85□□□□□ -1.95
RAE1P78406 RNA5SP380-201ENST00000517190 98 ntBASIC2.85□□□□□ -1.95
RAE1P78406 AC007619.1-201ENST00000544086 412 ntTSL 5 BASIC2.85□□□□□ -1.95
RAE1P78406 MAPK1-204ENST00000544786 951 ntTSL 1 (best) BASIC2.85□□□□□ -1.95
RAE1P78406 HSPE1P4-201ENST00000550617 308 ntBASIC2.85□□□□□ -1.95
RAE1P78406 AC026462.2-201ENST00000565771 286 ntTSL 2 BASIC2.85□□□□□ -1.95
RAE1P78406 AC024270.4-201ENST00000570202 421 ntTSL 3 BASIC2.85□□□□□ -1.95
RAE1P78406 AC104581.2-201ENST00000572227 430 ntBASIC2.85□□□□□ -1.95
RAE1P78406 AF001550.1-201ENST00000572747 573 ntTSL 4 BASIC2.85□□□□□ -1.95
RAE1P78406 MIR5571-201ENST00000577998 113 ntBASIC2.85□□□□□ -1.95
RAE1P78406 7SK.7-201ENST00000603504 247 ntBASIC2.85□□□□□ -1.95
RAE1P78406 AC069200.1-201ENST00000609511 323 ntBASIC2.85□□□□□ -1.95
RAE1P78406 AC099778.2-201ENST00000610904 211 ntBASIC2.85□□□□□ -1.95
RAE1P78406 uc_338.14-201ENST00000613162 166 ntBASIC2.85□□□□□ -1.95
RAE1P78406 C9orf153-205ENST00000617985 333 ntAPPRIS ALT2 TSL 5 BASIC2.85□□□□□ -1.95
RAE1P78406 AL365440.2-201ENST00000419738 2597 ntTSL 2 BASIC2.85□□□□□ -1.95
RAE1P78406 SYNE2-212ENST00000554584 20508 ntTSL 5 BASIC2.85□□□□□ -1.95
RAE1P78406 KTN1-206ENST00000413890 4473 ntAPPRIS ALT2 TSL 5 BASIC2.85□□□□□ -1.95
RAE1P78406 AF165147.1-201ENST00000433310 6103 ntTSL 2 BASIC2.85□□□□□ -1.95
RAE1P78406 AP003122.5-201ENST00000527668 3766 ntBASIC2.84□□□□□ -1.95
RAE1P78406 PALMD-205ENST00000615664 1844 ntTSL 5 BASIC2.84□□□□□ -1.95
RAE1P78406 MS4A14-202ENST00000395001 3401 ntTSL 5 BASIC2.84□□□□□ -1.95
RAE1P78406 AC092268.1-201ENST00000342691 405 ntBASIC2.84□□□□□ -1.95
RAE1P78406 Y_RNA.39-201ENST00000362620 98 ntBASIC2.84□□□□□ -1.95
RAE1P78406 RNU6-1010P-201ENST00000362757 107 ntBASIC2.84□□□□□ -1.95
RAE1P78406 RNU6-1285P-201ENST00000363480 105 ntBASIC2.84□□□□□ -1.95
RAE1P78406 Y_RNA.158-201ENST00000363651 101 ntBASIC2.84□□□□□ -1.95
RAE1P78406 RNU4-42P-201ENST00000364738 142 ntBASIC2.84□□□□□ -1.95
RAE1P78406 RNA5SP494-201ENST00000410653 129 ntBASIC2.84□□□□□ -1.95
RAE1P78406 TRIAP1P1-201ENST00000427062 225 ntBASIC2.84□□□□□ -1.95
RAE1P78406 AC009414.1-201ENST00000427200 443 ntBASIC2.84□□□□□ -1.95
RAE1P78406 AC078809.1-201ENST00000427601 140 ntBASIC2.84□□□□□ -1.95
RAE1P78406 AP001324.2-201ENST00000461163 319 ntBASIC2.84□□□□□ -1.95
RAE1P78406 RN7SL807P-201ENST00000470923 297 ntBASIC2.84□□□□□ -1.95
RAE1P78406 RPL30P12-201ENST00000474666 353 ntBASIC2.84□□□□□ -1.95
RAE1P78406 AP004217.1-201ENST00000480579 346 ntBASIC2.84□□□□□ -1.95
RAE1P78406 AC006483.1-201ENST00000487308 313 ntBASIC2.84□□□□□ -1.95
RAE1P78406 LINC01337-201ENST00000515871 440 ntTSL 3 BASIC2.84□□□□□ -1.95
RAE1P78406 RNU6-1045P-201ENST00000516321 107 ntBASIC2.84□□□□□ -1.95
RAE1P78406 AC115990.1-201ENST00000526957 301 ntBASIC2.84□□□□□ -1.95
RAE1P78406 MRPS36P4-201ENST00000534436 298 ntBASIC2.84□□□□□ -1.95
RAE1P78406 AL139193.1-201ENST00000554967 539 ntTSL 4 BASIC2.84□□□□□ -1.95
RAE1P78406 AC025271.3-201ENST00000563031 255 ntTSL 5 BASIC2.84□□□□□ -1.95
RAE1P78406 RPL23AP88-201ENST00000605759 454 ntBASIC2.84□□□□□ -1.95
RAE1P78406 Z84484.1-202ENST00000612718 60 ntTSL 5 BASIC2.84□□□□□ -1.95
RAE1P78406 AL138825.1-201ENST00000618587 192 ntBASIC2.84□□□□□ -1.95
RAE1P78406 AC007792.1-201ENST00000623023 402 ntBASIC2.84□□□□□ -1.95
RAE1P78406 DLD-214ENST00000639772 421 ntTSL 5 BASIC2.84□□□□□ -1.95
RAE1P78406 EFCAB3-202ENST00000450662 1694 ntTSL 5 BASIC2.84□□□□□ -1.95
RAE1P78406 OR8K3-203ENST00000641662 2438 ntAPPRIS P1 BASIC2.84□□□□□ -1.95
RAE1P78406 PPIP5K2-203ENST00000414217 5842 ntAPPRIS P3 TSL 1 (best) BASIC2.84□□□□□ -1.96
RAE1P78406 LINC01938-201ENST00000521341 1864 ntTSL 2 BASIC2.84□□□□□ -1.96
RAE1P78406 MTND4P1-201ENST00000457501 1466 ntBASIC2.84□□□□□ -1.96
RAE1P78406 ZNF826P-207ENST00000622273 1910 ntBASIC2.83□□□□□ -1.96
RAE1P78406 THNSL1-201ENST00000376356 3691 ntAPPRIS P1 TSL 1 (best) BASIC2.83□□□□□ -1.96
RAE1P78406 AK9-203ENST00000368948 2478 ntTSL 5 BASIC2.83□□□□□ -1.96
RAE1P78406 DDX6-206ENST00000534980 4538 ntAPPRIS P1 TSL 1 (best) BASIC2.83□□□□□ -1.96
RAE1P78406 MME-216ENST00000615825 5523 ntAPPRIS P1 TSL 1 (best) BASIC2.83□□□□□ -1.96
RAE1P78406 COMMD6-201ENST00000355801 486 ntTSL 2 BASIC2.83□□□□□ -1.96
RAE1P78406 Y_RNA.504-201ENST00000384481 104 ntBASIC2.83□□□□□ -1.96
RAE1P78406 MIR34B-201ENST00000385076 84 ntBASIC2.83□□□□□ -1.96
RAE1P78406 SNORA12.2-201ENST00000391040 156 ntBASIC2.83□□□□□ -1.96
RAE1P78406 AL133475.1-201ENST00000404414 305 ntBASIC2.83□□□□□ -1.96
RAE1P78406 RNU6-1140P-201ENST00000410517 106 ntBASIC2.83□□□□□ -1.96
RAE1P78406 AC023051.1-201ENST00000414098 876 ntTSL 5 BASIC2.83□□□□□ -1.96
RAE1P78406 AC007566.1-201ENST00000427458 643 ntTSL 5 BASIC2.83□□□□□ -1.96
RAE1P78406 MTCO3P29-201ENST00000432119 779 ntBASIC2.83□□□□□ -1.96
RAE1P78406 AC005160.1-201ENST00000432405 381 ntTSL 3 BASIC2.83□□□□□ -1.96
RAE1P78406 AC018495.1-201ENST00000440266 452 ntTSL 3 BASIC2.83□□□□□ -1.96
RAE1P78406 AL020998.1-201ENST00000444923 229 ntTSL 3 BASIC2.83□□□□□ -1.96
RAE1P78406 AL353705.4-201ENST00000449661 238 ntBASIC2.83□□□□□ -1.96
RAE1P78406 SNRPGP7-201ENST00000469016 106 ntBASIC2.83□□□□□ -1.96
RAE1P78406 RPL30P1-201ENST00000488676 339 ntBASIC2.83□□□□□ -1.96
RAE1P78406 AF186996.7-201ENST00000492781 209 ntBASIC2.83□□□□□ -1.96
RAE1P78406 AC093523.1-201ENST00000503268 499 ntTSL 3 BASIC2.83□□□□□ -1.96
RAE1P78406 RNU4-77P-201ENST00000516692 156 ntBASIC2.83□□□□□ -1.96
RAE1P78406 AL049775.2-201ENST00000557547 558 ntTSL 4 BASIC2.83□□□□□ -1.96
RAE1P78406 AC105137.2-201ENST00000569073 466 ntBASIC2.83□□□□□ -1.96
RAE1P78406 MIR4680-201ENST00000580906 66 ntBASIC2.83□□□□□ -1.96
RAE1P78406 AL137843.1-201ENST00000605078 385 ntBASIC2.83□□□□□ -1.96
RAE1P78406 AC100812.1-201ENST00000607622 580 ntBASIC2.83□□□□□ -1.96
RAE1P78406 MIR1244-1-201ENST00000612829 85 ntBASIC2.83□□□□□ -1.96
RAE1P78406 AC084757.4-201ENST00000616350 526 ntBASIC2.83□□□□□ -1.96
RAE1P78406 AL159153.1-201ENST00000619688 317 ntBASIC2.83□□□□□ -1.96
RAE1P78406 AL606534.2-204ENST00000635008 178 ntBASIC2.83□□□□□ -1.96
RAE1P78406 MIR1244-3-201ENST00000635744 85 ntBASIC2.83□□□□□ -1.96
RAE1P78406 MIR4272-201ENST00000635924 64 ntBASIC2.83□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 136.1 ms