Protein–RNA interactions for Protein: P68431

HIST1H3A, Histone H3.1, humanhuman

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H3AP68431 BNIP3P8-201ENST00000597863 560 ntBASIC0.67□□□□□ -2.3
HIST1H3AP68431 AC107304.1-201ENST00000604229 296 ntBASIC0.67□□□□□ -2.3
HIST1H3AP68431 AC099566.1-205ENST00000609411 657 ntTSL 5 BASIC0.67□□□□□ -2.3
HIST1H3AP68431 AL138955.1-201ENST00000622881 1040 ntBASIC0.67□□□□□ -2.3
HIST1H3AP68431 VPS13A-206ENST00000376646 2262 ntTSL 5 BASIC0.67□□□□□ -2.3
HIST1H3AP68431 AL159152.1-201ENST00000635019 2587 ntBASIC0.66□□□□□ -2.3
HIST1H3AP68431 SNORA63D-201ENST00000364359 132 ntBASIC0.66□□□□□ -2.3
HIST1H3AP68431 RNU6-1179P-201ENST00000384667 107 ntBASIC0.66□□□□□ -2.3
HIST1H3AP68431 MIR194-1-201ENST00000384892 85 ntBASIC0.66□□□□□ -2.3
HIST1H3AP68431 RNU2-64P-201ENST00000411315 191 ntBASIC0.66□□□□□ -2.3
HIST1H3AP68431 AC010099.3-201ENST00000423896 409 ntBASIC0.66□□□□□ -2.3
HIST1H3AP68431 AC004941.2-201ENST00000427009 228 ntBASIC0.66□□□□□ -2.3
HIST1H3AP68431 RPL23AP30-201ENST00000432419 501 ntBASIC0.66□□□□□ -2.3
HIST1H3AP68431 ATP5J2P3-201ENST00000451550 258 ntBASIC0.66□□□□□ -2.3
HIST1H3AP68431 GYPA-209ENST00000512789 258 ntTSL 1 (best) BASIC0.66□□□□□ -2.3
HIST1H3AP68431 MTCO3P28-201ENST00000513351 515 ntBASIC0.66□□□□□ -2.3
HIST1H3AP68431 AC008015.1-201ENST00000555505 465 ntBASIC0.66□□□□□ -2.3
HIST1H3AP68431 AL049869.2-201ENST00000556634 365 ntTSL 2 BASIC0.66□□□□□ -2.3
HIST1H3AP68431 AC012404.2-201ENST00000558572 481 ntTSL 3 BASIC0.66□□□□□ -2.3
HIST1H3AP68431 AC090227.2-201ENST00000591105 340 ntTSL 5 BASIC0.66□□□□□ -2.3
HIST1H3AP68431 AC092070.3-201ENST00000596041 337 ntTSL 3 BASIC0.66□□□□□ -2.3
HIST1H3AP68431 DEFB131E-202ENST00000602581 683 ntBASIC0.66□□□□□ -2.3
HIST1H3AP68431 AC108706.1-201ENST00000611053 297 ntBASIC0.66□□□□□ -2.3
HIST1H3AP68431 TLR6-205ENST00000610323 1443 ntTSL 5 BASIC0.65□□□□□ -2.3
HIST1H3AP68431 RNU1-96P-201ENST00000364163 162 ntBASIC0.65□□□□□ -2.31
HIST1H3AP68431 RNA5SP259-201ENST00000365541 109 ntBASIC0.65□□□□□ -2.31
HIST1H3AP68431 MIR544A-201ENST00000384855 91 ntBASIC0.65□□□□□ -2.31
HIST1H3AP68431 RNU6-1176P-201ENST00000390955 107 ntBASIC0.65□□□□□ -2.31
HIST1H3AP68431 COX6CP10-201ENST00000416832 224 ntBASIC0.65□□□□□ -2.31
HIST1H3AP68431 MTCO3P29-201ENST00000432119 779 ntBASIC0.65□□□□□ -2.31
HIST1H3AP68431 SNORA70.22-201ENST00000517160 124 ntBASIC0.65□□□□□ -2.31
HIST1H3AP68431 AC103853.2-201ENST00000519805 716 ntTSL 3 BASIC0.65□□□□□ -2.31
HIST1H3AP68431 AC009930.1-201ENST00000522330 191 ntTSL 5 BASIC0.65□□□□□ -2.31
HIST1H3AP68431 MIR548AC-201ENST00000585049 88 ntBASIC0.65□□□□□ -2.31
HIST1H3AP68431 AL034555.1-201ENST00000604816 211 ntBASIC0.65□□□□□ -2.31
HIST1H3AP68431 AC018889.1-201ENST00000605372 397 ntBASIC0.65□□□□□ -2.31
HIST1H3AP68431 AC024060.1-201ENST00000607052 494 ntBASIC0.65□□□□□ -2.31
HIST1H3AP68431 AC091965.4-201ENST00000607691 587 ntBASIC0.65□□□□□ -2.31
HIST1H3AP68431 AC106800.4-201ENST00000614905 153 ntBASIC0.65□□□□□ -2.31
HIST1H3AP68431 AC026585.1-201ENST00000619582 524 ntBASIC0.65□□□□□ -2.31
HIST1H3AP68431 MIR6866-201ENST00000638146 69 ntBASIC0.65□□□□□ -2.31
HIST1H3AP68431 FABP12-201ENST00000360464 551 ntAPPRIS P1 TSL 1 (best) BASIC0.64□□□□□ -2.31
HIST1H3AP68431 RNU4-15P-201ENST00000362613 141 ntBASIC0.64□□□□□ -2.31
HIST1H3AP68431 RNU6-511P-201ENST00000363496 107 ntBASIC0.64□□□□□ -2.31
HIST1H3AP68431 ARL5AP1-201ENST00000418991 388 ntBASIC0.64□□□□□ -2.31
HIST1H3AP68431 EIF1AX-AS1-201ENST00000424026 378 ntTSL 5 BASIC0.64□□□□□ -2.31
HIST1H3AP68431 AL008629.1-201ENST00000438615 184 ntBASIC0.64□□□□□ -2.31
HIST1H3AP68431 MTCO3P9-201ENST00000506989 781 ntBASIC0.64□□□□□ -2.31
HIST1H3AP68431 ATP5EP1-201ENST00000510257 156 ntBASIC0.64□□□□□ -2.31
HIST1H3AP68431 MIR3146-201ENST00000580367 79 ntBASIC0.64□□□□□ -2.31
HIST1H3AP68431 B3GNTL1P2-201ENST00000603673 288 ntBASIC0.64□□□□□ -2.31
HIST1H3AP68431 AL158032.1-201ENST00000605401 106 ntBASIC0.64□□□□□ -2.31
HIST1H3AP68431 HOTAIRM1_5.1-201ENST00000619311 145 ntBASIC0.64□□□□□ -2.31
HIST1H3AP68431 AC007527.2-201ENST00000621825 546 ntTSL 5 BASIC0.64□□□□□ -2.31
HIST1H3AP68431 SERPINI2-202ENST00000461846 1514 ntAPPRIS P1 TSL 1 (best) BASIC0.64□□□□□ -2.31
HIST1H3AP68431 AC008163.1-202ENST00000636004 2889 ntBASIC0.63□□□□□ -2.31
HIST1H3AP68431 RNU6-384P-201ENST00000364900 104 ntBASIC0.63□□□□□ -2.31
HIST1H3AP68431 RNU6-769P-201ENST00000384407 104 ntBASIC0.63□□□□□ -2.31
HIST1H3AP68431 NPS-201ENST00000398023 270 ntAPPRIS P1 TSL 5 BASIC0.63□□□□□ -2.31
HIST1H3AP68431 AL158834.1-201ENST00000419441 466 ntTSL 5 BASIC0.63□□□□□ -2.31
HIST1H3AP68431 AL591043.1-201ENST00000432461 424 ntBASIC0.63□□□□□ -2.31
HIST1H3AP68431 AC007969.2-201ENST00000441891 191 ntBASIC0.63□□□□□ -2.31
HIST1H3AP68431 MTND3P5-201ENST00000512798 333 ntBASIC0.63□□□□□ -2.31
HIST1H3AP68431 AC074344.1-201ENST00000512823 224 ntBASIC0.63□□□□□ -2.31
HIST1H3AP68431 AC115990.1-201ENST00000526957 301 ntBASIC0.63□□□□□ -2.31
HIST1H3AP68431 MIR544B-201ENST00000582372 78 ntBASIC0.63□□□□□ -2.31
HIST1H3AP68431 BCRP9-201ENST00000605312 388 ntBASIC0.63□□□□□ -2.31
HIST1H3AP68431 AC008945.2-201ENST00000606056 604 ntBASIC0.63□□□□□ -2.31
HIST1H3AP68431 RNU6-88P-201ENST00000606801 100 ntBASIC0.63□□□□□ -2.31
HIST1H3AP68431 AC072039.2-201ENST00000608883 439 ntBASIC0.63□□□□□ -2.31
HIST1H3AP68431 AC104073.3-201ENST00000610942 955 ntBASIC0.63□□□□□ -2.31
HIST1H3AP68431 AL359547.2-201ENST00000615810 418 ntBASIC0.63□□□□□ -2.31
HIST1H3AP68431 SLC25A46-204ENST00000504098 2345 ntTSL 5 BASIC0.63□□□□□ -2.31
HIST1H3AP68431 RNU6-960P-201ENST00000364056 120 ntBASIC0.62□□□□□ -2.31
HIST1H3AP68431 SNORA32.2-201ENST00000384049 122 ntBASIC0.62□□□□□ -2.31
HIST1H3AP68431 MIR1276-201ENST00000408707 83 ntBASIC0.62□□□□□ -2.31
HIST1H3AP68431 TRIM60P10Y-201ENST00000425589 751 ntBASIC0.62□□□□□ -2.31
HIST1H3AP68431 AL162725.2-201ENST00000430545 748 ntTSL 5 BASIC0.62□□□□□ -2.31
HIST1H3AP68431 AC069257.2-201ENST00000441819 155 ntBASIC0.62□□□□□ -2.31
HIST1H3AP68431 BTBD7P2-201ENST00000441962 620 ntBASIC0.62□□□□□ -2.31
HIST1H3AP68431 DPP10-AS2-201ENST00000446992 624 ntTSL 5 BASIC0.62□□□□□ -2.31
HIST1H3AP68431 PDCD5P2-201ENST00000507570 312 ntBASIC0.62□□□□□ -2.31
HIST1H3AP68431 KRTAP13-6P-201ENST00000508999 371 ntBASIC0.62□□□□□ -2.31
HIST1H3AP68431 RNU6-197P-201ENST00000516680 100 ntBASIC0.62□□□□□ -2.31
HIST1H3AP68431 AC013828.2-201ENST00000532487 235 ntBASIC0.62□□□□□ -2.31
HIST1H3AP68431 AC025580.2-205ENST00000559960 552 ntTSL 4 BASIC0.62□□□□□ -2.31
HIST1H3AP68431 AC007495.2-202ENST00000564102 535 ntTSL 4 BASIC0.62□□□□□ -2.31
HIST1H3AP68431 AL031716.1-201ENST00000569106 530 ntTSL 5 BASIC0.62□□□□□ -2.31
HIST1H3AP68431 MIR4709-201ENST00000577272 72 ntBASIC0.62□□□□□ -2.31
HIST1H3AP68431 SNORA59B-202ENST00000578183 701 ntBASIC0.62□□□□□ -2.31
HIST1H3AP68431 MIR4653-201ENST00000585107 83 ntBASIC0.62□□□□□ -2.31
HIST1H3AP68431 AC110760.3-201ENST00000598794 467 ntBASIC0.62□□□□□ -2.31
HIST1H3AP68431 MIR337-201ENST00000362281 93 ntBASIC0.61□□□□□ -2.31
HIST1H3AP68431 RNU6-78P-201ENST00000362897 107 ntBASIC0.61□□□□□ -2.31
HIST1H3AP68431 RNU6-527P-201ENST00000363425 104 ntBASIC0.61□□□□□ -2.31
HIST1H3AP68431 RNU6-413P-201ENST00000384115 107 ntBASIC0.61□□□□□ -2.31
HIST1H3AP68431 MIR19B1-201ENST00000384829 87 ntBASIC0.61□□□□□ -2.31
HIST1H3AP68431 SNORA12.2-201ENST00000391040 156 ntBASIC0.61□□□□□ -2.31
HIST1H3AP68431 AL390774.2-201ENST00000423942 788 ntTSL 3 BASIC0.61□□□□□ -2.31
HIST1H3AP68431 MTND4P20-201ENST00000424125 869 ntBASIC0.61□□□□□ -2.31
Retrieved 100 of 98,524 protein–RNA pairs in 103.2 ms