Protein–RNA interactions for Protein: P61758

VBP1, Prefoldin subunit 3, humanhuman

Predictions only

Length 197 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VBP1P61758 AC108667.1-201ENST00000428618 249 ntBASIC0.46□□□□□ -2.34
VBP1P61758 SIRPG-AS1-201ENST00000437384 410 ntTSL 3 BASIC0.46□□□□□ -2.34
VBP1P61758 AC007969.2-201ENST00000441891 191 ntBASIC0.46□□□□□ -2.34
VBP1P61758 AF129075.1-201ENST00000457162 794 ntTSL 3 BASIC0.46□□□□□ -2.34
VBP1P61758 AC006026.2-201ENST00000457376 180 ntBASIC0.46□□□□□ -2.34
VBP1P61758 MTCO3P9-201ENST00000506989 781 ntBASIC0.46□□□□□ -2.34
VBP1P61758 RNU6-1028P-201ENST00000517164 93 ntBASIC0.46□□□□□ -2.34
VBP1P61758 AL590705.4-201ENST00000532209 134 ntBASIC0.46□□□□□ -2.34
VBP1P61758 AC004812.1-201ENST00000540773 146 ntBASIC0.46□□□□□ -2.34
VBP1P61758 AC023050.2-201ENST00000544968 387 ntBASIC0.46□□□□□ -2.34
VBP1P61758 AC092070.3-201ENST00000596041 337 ntTSL 3 BASIC0.46□□□□□ -2.34
VBP1P61758 AL138889.2-201ENST00000603883 242 ntBASIC0.46□□□□□ -2.34
VBP1P61758 AL136363.2-201ENST00000604173 851 ntBASIC0.46□□□□□ -2.34
VBP1P61758 AC097717.1-250ENST00000608498 273 ntTSL 5 BASIC0.46□□□□□ -2.34
VBP1P61758 AC131235.4-201ENST00000609288 620 ntBASIC0.46□□□□□ -2.34
VBP1P61758 SCARNA4-202ENST00000625402 129 ntBASIC0.46□□□□□ -2.34
VBP1P61758 AC092813.1-201ENST00000635455 969 ntTSL 5 BASIC0.46□□□□□ -2.34
VBP1P61758 AC106858.1-201ENST00000637497 429 ntBASIC0.46□□□□□ -2.34
VBP1P61758 AL159152.1-201ENST00000635019 2587 ntBASIC0.46□□□□□ -2.34
VBP1P61758 OR4G2P-201ENST00000328113 903 ntBASIC0.45□□□□□ -2.34
VBP1P61758 MIR373-201ENST00000362273 69 ntBASIC0.45□□□□□ -2.34
VBP1P61758 RNU6-1123P-201ENST00000362347 106 ntBASIC0.45□□□□□ -2.34
VBP1P61758 RNY3P13-201ENST00000365542 102 ntBASIC0.45□□□□□ -2.34
VBP1P61758 MIR544A-201ENST00000384855 91 ntBASIC0.45□□□□□ -2.34
VBP1P61758 MIR508-201ENST00000384857 115 ntBASIC0.45□□□□□ -2.34
VBP1P61758 CoTC_ribozyme.1-201ENST00000408104 192 ntBASIC0.45□□□□□ -2.34
VBP1P61758 RN7SKP266-201ENST00000410232 287 ntBASIC0.45□□□□□ -2.34
VBP1P61758 AL121904.1-202ENST00000416638 656 ntTSL 5 BASIC0.45□□□□□ -2.34
VBP1P61758 ARL5AP1-201ENST00000418991 388 ntBASIC0.45□□□□□ -2.34
VBP1P61758 USP9YP14-201ENST00000430663 563 ntBASIC0.45□□□□□ -2.34
VBP1P61758 NDUFB1P2-201ENST00000449477 176 ntBASIC0.45□□□□□ -2.34
VBP1P61758 AC114501.3-201ENST00000453648 164 ntTSL 5 BASIC0.45□□□□□ -2.34
VBP1P61758 AL157400.4-201ENST00000455699 667 ntTSL 1 (best) BASIC0.45□□□□□ -2.34
VBP1P61758 PTPRG-AS1-202ENST00000466893 823 ntTSL 4 BASIC0.45□□□□□ -2.34
VBP1P61758 AL163540.1-201ENST00000485382 386 ntBASIC0.45□□□□□ -2.34
VBP1P61758 AHI1-208ENST00000488690 712 ntTSL 5 BASIC0.45□□□□□ -2.34
VBP1P61758 SKP1-203ENST00000517625 876 ntAPPRIS P4 TSL 3 BASIC0.45□□□□□ -2.34
VBP1P61758 AC091489.2-201ENST00000566263 604 ntBASIC0.45□□□□□ -2.34
VBP1P61758 MIR4709-201ENST00000577272 72 ntBASIC0.45□□□□□ -2.34
VBP1P61758 AC098848.2-201ENST00000588023 330 ntBASIC0.45□□□□□ -2.34
VBP1P61758 BNIP3P26-201ENST00000600827 554 ntBASIC0.45□□□□□ -2.34
VBP1P61758 AL353997.5-201ENST00000618886 171 ntBASIC0.45□□□□□ -2.34
VBP1P61758 AC097372.5-201ENST00000623665 376 ntBASIC0.45□□□□□ -2.34
VBP1P61758 CDK1-209ENST00000614696 1884 ntTSL 5 BASIC0.45□□□□□ -2.34
VBP1P61758 SNORD114-27-201ENST00000363766 70 ntBASIC0.44□□□□□ -2.34
VBP1P61758 RNU1-96P-201ENST00000364163 162 ntBASIC0.44□□□□□ -2.34
VBP1P61758 Y_RNA.311-201ENST00000365068 96 ntBASIC0.44□□□□□ -2.34
VBP1P61758 RNU5E-6P-201ENST00000365574 115 ntBASIC0.44□□□□□ -2.34
VBP1P61758 SNORA18.2-201ENST00000383865 132 ntBASIC0.44□□□□□ -2.34
VBP1P61758 RNU6-190P-201ENST00000384154 102 ntBASIC0.44□□□□□ -2.34
VBP1P61758 MIR942-201ENST00000401111 86 ntBASIC0.44□□□□□ -2.34
VBP1P61758 RPS3AP37-201ENST00000419176 745 ntBASIC0.44□□□□□ -2.34
VBP1P61758 CETN4P-201ENST00000432407 469 ntBASIC0.44□□□□□ -2.34
VBP1P61758 AL591806.2-201ENST00000433122 173 ntBASIC0.44□□□□□ -2.34
VBP1P61758 AL121890.1-201ENST00000435457 205 ntBASIC0.44□□□□□ -2.34
VBP1P61758 RPS25P9-201ENST00000435591 252 ntBASIC0.44□□□□□ -2.34
VBP1P61758 AC010095.1-201ENST00000443543 144 ntBASIC0.44□□□□□ -2.34
VBP1P61758 RPL39P38-201ENST00000467018 153 ntBASIC0.44□□□□□ -2.34
VBP1P61758 AC113347.3-201ENST00000509113 148 ntBASIC0.44□□□□□ -2.34
VBP1P61758 MTCO3P27-201ENST00000514397 196 ntBASIC0.44□□□□□ -2.34
VBP1P61758 SUMO2P16-201ENST00000519475 264 ntBASIC0.44□□□□□ -2.34
VBP1P61758 AC011604.1-201ENST00000545978 196 ntBASIC0.44□□□□□ -2.34
VBP1P61758 LINC02461-201ENST00000553211 836 ntTSL 3 BASIC0.44□□□□□ -2.34
VBP1P61758 AL512791.1-201ENST00000555853 300 ntTSL 3 BASIC0.44□□□□□ -2.34
VBP1P61758 MIR4742-201ENST00000581069 85 ntBASIC0.44□□□□□ -2.34
VBP1P61758 AC018889.1-201ENST00000605372 397 ntBASIC0.44□□□□□ -2.34
VBP1P61758 RMST_7.1-201ENST00000621935 268 ntBASIC0.44□□□□□ -2.34
VBP1P61758 AL589826.1-201ENST00000340697 249 ntBASIC0.43□□□□□ -2.34
VBP1P61758 RNU6-621P-201ENST00000364752 109 ntBASIC0.43□□□□□ -2.34
VBP1P61758 RNU6-438P-201ENST00000365561 103 ntBASIC0.43□□□□□ -2.34
VBP1P61758 RNU6ATAC3P-201ENST00000387974 126 ntBASIC0.43□□□□□ -2.34
VBP1P61758 MIR1261-201ENST00000408659 82 ntBASIC0.43□□□□□ -2.34
VBP1P61758 ELOCP17-201ENST00000414751 326 ntBASIC0.43□□□□□ -2.34
VBP1P61758 ELOCP9-201ENST00000418624 239 ntBASIC0.43□□□□□ -2.34
VBP1P61758 USP9YP11-201ENST00000427537 717 ntBASIC0.43□□□□□ -2.34
VBP1P61758 AC011891.1-201ENST00000437088 432 ntTSL 3 BASIC0.43□□□□□ -2.34
VBP1P61758 MTCYBP1-201ENST00000454315 1119 ntBASIC0.43□□□□□ -2.34
VBP1P61758 AL358176.1-201ENST00000457477 357 ntTSL 5 BASIC0.43□□□□□ -2.34
VBP1P61758 AC108210.2-201ENST00000503681 201 ntBASIC0.43□□□□□ -2.34
VBP1P61758 AC010387.1-201ENST00000507526 487 ntTSL 2 BASIC0.43□□□□□ -2.34
VBP1P61758 RNU6-1041P-201ENST00000516254 102 ntBASIC0.43□□□□□ -2.34
VBP1P61758 RNA5SP255-201ENST00000516370 107 ntBASIC0.43□□□□□ -2.34
VBP1P61758 AC021231.3-201ENST00000558497 370 ntBASIC0.43□□□□□ -2.34
VBP1P61758 LINC01899-202ENST00000583756 575 ntTSL 3 BASIC0.43□□□□□ -2.34
VBP1P61758 KC877982.1-201ENST00000602313 470 ntBASIC0.43□□□□□ -2.34
VBP1P61758 AC105148.1-201ENST00000604961 409 ntBASIC0.43□□□□□ -2.34
VBP1P61758 BCRP9-201ENST00000605312 388 ntBASIC0.43□□□□□ -2.34
VBP1P61758 AC110609.1-201ENST00000608228 303 ntTSL 3 BASIC0.43□□□□□ -2.34
VBP1P61758 AC108747.1-201ENST00000609508 535 ntBASIC0.43□□□□□ -2.34
VBP1P61758 AC245297.2-201ENST00000610119 565 ntBASIC0.43□□□□□ -2.34
VBP1P61758 AP002782.1-201ENST00000623107 614 ntBASIC0.43□□□□□ -2.34
VBP1P61758 VBP1-204ENST00000625964 1547 ntTSL 5 BASIC0.43□□□□□ -2.34
VBP1P61758 STARD6-201ENST00000307844 663 ntAPPRIS P1 TSL 1 (best) BASIC0.42□□□□□ -2.34
VBP1P61758 RNU6-511P-201ENST00000363496 107 ntBASIC0.42□□□□□ -2.34
VBP1P61758 Y_RNA.192-201ENST00000363977 102 ntBASIC0.42□□□□□ -2.34
VBP1P61758 Y_RNA.327-201ENST00000365201 102 ntBASIC0.42□□□□□ -2.34
VBP1P61758 Y_RNA.363-201ENST00000365529 113 ntBASIC0.42□□□□□ -2.34
VBP1P61758 RNU6-1179P-201ENST00000384667 107 ntBASIC0.42□□□□□ -2.34
VBP1P61758 MIR578-201ENST00000384828 96 ntBASIC0.42□□□□□ -2.34
VBP1P61758 MIR10B-201ENST00000385011 110 ntBASIC0.42□□□□□ -2.34
Retrieved 100 of 98,524 protein–RNA pairs in 108.8 ms