Protein–RNA interactions for Protein: P60953

CDC42, Cell division control protein 42 homolog, humanhuman

Predictions only

Length 191 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42P60953 MTND5P15-201ENST00000434246 349 ntBASIC0.68□□□□□ -2.3
CDC42P60953 AC099677.2-201ENST00000436385 175 ntBASIC0.68□□□□□ -2.3
CDC42P60953 ZNF736P5Y-201ENST00000451173 805 ntBASIC0.68□□□□□ -2.3
CDC42P60953 MTCO3P9-201ENST00000506989 781 ntBASIC0.68□□□□□ -2.3
CDC42P60953 PCAT4-202ENST00000514836 373 ntTSL 3 BASIC0.68□□□□□ -2.3
CDC42P60953 RN7SKP88-201ENST00000516847 250 ntBASIC0.68□□□□□ -2.3
CDC42P60953 AC103853.2-201ENST00000519805 716 ntTSL 3 BASIC0.68□□□□□ -2.3
CDC42P60953 ZFAND1-217ENST00000521895 885 ntTSL 3 BASIC0.68□□□□□ -2.3
CDC42P60953 AC022695.3-201ENST00000523385 478 ntTSL 3 BASIC0.68□□□□□ -2.3
CDC42P60953 MIR4698-201ENST00000577795 80 ntBASIC0.68□□□□□ -2.3
CDC42P60953 AC025887.1-201ENST00000578349 264 ntTSL 3 BASIC0.68□□□□□ -2.3
CDC42P60953 ZNF404-202ENST00000587539 1851 ntAPPRIS P2 TSL 5 BASIC0.68□□□□□ -2.3
CDC42P60953 VN1R107P-201ENST00000601784 209 ntBASIC0.68□□□□□ -2.3
CDC42P60953 BNIP3P10-201ENST00000605360 577 ntBASIC0.68□□□□□ -2.3
CDC42P60953 7SK.8-201ENST00000612110 250 ntBASIC0.68□□□□□ -2.3
CDC42P60953 7SK.11-201ENST00000615477 250 ntBASIC0.68□□□□□ -2.3
CDC42P60953 Hammerhead_HH9.1-201ENST00000616606 77 ntBASIC0.68□□□□□ -2.3
CDC42P60953 7SK.13-201ENST00000622040 250 ntBASIC0.68□□□□□ -2.3
CDC42P60953 RNU6-1179P-201ENST00000384667 107 ntBASIC0.67□□□□□ -2.3
CDC42P60953 MIR100-201ENST00000385259 80 ntBASIC0.67□□□□□ -2.3
CDC42P60953 TRAJ3-201ENST00000390534 62 ntAPPRIS P1 BASIC0.67□□□□□ -2.3
CDC42P60953 RNU6-1176P-201ENST00000390955 107 ntBASIC0.67□□□□□ -2.3
CDC42P60953 SNORA12-201ENST00000391162 147 ntBASIC0.67□□□□□ -2.3
CDC42P60953 AL136310.1-201ENST00000404926 654 ntBASIC0.67□□□□□ -2.3
CDC42P60953 RNU6ATAC27P-201ENST00000408289 119 ntBASIC0.67□□□□□ -2.3
CDC42P60953 AC069079.1-201ENST00000419889 400 ntTSL 3 BASIC0.67□□□□□ -2.3
CDC42P60953 AL731563.2-201ENST00000431293 291 ntTSL 5 BASIC0.67□□□□□ -2.3
CDC42P60953 AL138808.1-201ENST00000441428 371 ntTSL 2 BASIC0.67□□□□□ -2.3
CDC42P60953 AL512658.1-201ENST00000449072 533 ntTSL 3 BASIC0.67□□□□□ -2.3
CDC42P60953 snoU13.30-201ENST00000458951 104 ntBASIC0.67□□□□□ -2.3
CDC42P60953 AC022447.4-201ENST00000504053 364 ntBASIC0.67□□□□□ -2.3
CDC42P60953 AC010587.2-201ENST00000511727 448 ntBASIC0.67□□□□□ -2.3
CDC42P60953 CYCSP23-201ENST00000519781 313 ntBASIC0.67□□□□□ -2.3
CDC42P60953 XIRP2-AS1-201ENST00000525330 776 ntTSL 3 BASIC0.67□□□□□ -2.3
CDC42P60953 AC013828.2-201ENST00000532487 235 ntBASIC0.67□□□□□ -2.3
CDC42P60953 AC130371.1-204ENST00000576197 401 ntTSL 3 BASIC0.67□□□□□ -2.3
CDC42P60953 MIR4653-201ENST00000585107 83 ntBASIC0.67□□□□□ -2.3
CDC42P60953 AL590229.1-201ENST00000603497 542 ntBASIC0.67□□□□□ -2.3
CDC42P60953 AL022345.2-201ENST00000606307 135 ntBASIC0.67□□□□□ -2.3
CDC42P60953 AC026585.1-201ENST00000619582 524 ntBASIC0.67□□□□□ -2.3
CDC42P60953 AL138955.1-201ENST00000622881 1040 ntBASIC0.67□□□□□ -2.3
CDC42P60953 OR4G3P-201ENST00000633500 913 ntBASIC0.67□□□□□ -2.3
CDC42P60953 OR5AK2-201ENST00000326855 996 ntAPPRIS P1 BASIC0.66□□□□□ -2.3
CDC42P60953 Y_RNA.46-201ENST00000362695 102 ntBASIC0.66□□□□□ -2.3
CDC42P60953 SNORA4.1-201ENST00000364263 144 ntBASIC0.66□□□□□ -2.3
CDC42P60953 SNORA18.2-201ENST00000383865 132 ntBASIC0.66□□□□□ -2.3
CDC42P60953 MIR544A-201ENST00000384855 91 ntBASIC0.66□□□□□ -2.3
CDC42P60953 TRAJ47-201ENST00000390490 57 ntAPPRIS P1 BASIC0.66□□□□□ -2.3
CDC42P60953 AL137856.1-202ENST00000418238 422 ntTSL 3 BASIC0.66□□□□□ -2.3
CDC42P60953 TRIM60P10Y-201ENST00000425589 751 ntBASIC0.66□□□□□ -2.3
CDC42P60953 AL162725.2-201ENST00000430545 748 ntTSL 5 BASIC0.66□□□□□ -2.3
CDC42P60953 SNRPEP8-201ENST00000442866 260 ntBASIC0.66□□□□□ -2.3
CDC42P60953 RPS4XP11-201ENST00000446897 772 ntBASIC0.66□□□□□ -2.3
CDC42P60953 Z73417.1-201ENST00000447373 778 ntBASIC0.66□□□□□ -2.3
CDC42P60953 HMGN2P9-201ENST00000476875 229 ntBASIC0.66□□□□□ -2.3
CDC42P60953 AC145146.1-201ENST00000496370 254 ntBASIC0.66□□□□□ -2.3
CDC42P60953 MTND3P5-201ENST00000512798 333 ntBASIC0.66□□□□□ -2.3
CDC42P60953 AC011979.2-201ENST00000527568 352 ntBASIC0.66□□□□□ -2.3
CDC42P60953 DEFB131E-202ENST00000602581 683 ntBASIC0.66□□□□□ -2.3
CDC42P60953 AL034555.1-201ENST00000604816 211 ntBASIC0.66□□□□□ -2.3
CDC42P60953 AL365434.2-201ENST00000607979 234 ntBASIC0.66□□□□□ -2.3
CDC42P60953 AC108747.1-201ENST00000609508 535 ntBASIC0.66□□□□□ -2.3
CDC42P60953 AC108706.1-201ENST00000611053 297 ntBASIC0.66□□□□□ -2.3
CDC42P60953 AC008781.3-201ENST00000622826 335 ntTSL 2 BASIC0.66□□□□□ -2.3
CDC42P60953 AC099786.3-201ENST00000565735 1410 ntBASIC0.65□□□□□ -2.3
CDC42P60953 RNU6-1285P-201ENST00000363480 105 ntBASIC0.65□□□□□ -2.31
CDC42P60953 RNU6-438P-201ENST00000365561 103 ntBASIC0.65□□□□□ -2.31
CDC42P60953 AC006461.1-201ENST00000412637 326 ntBASIC0.65□□□□□ -2.31
CDC42P60953 CYCSP33-201ENST00000414485 327 ntBASIC0.65□□□□□ -2.31
CDC42P60953 AC019070.1-201ENST00000415008 1024 ntBASIC0.65□□□□□ -2.31
CDC42P60953 ARL5AP1-201ENST00000418991 388 ntBASIC0.65□□□□□ -2.31
CDC42P60953 AL390774.2-201ENST00000423942 788 ntTSL 3 BASIC0.65□□□□□ -2.31
CDC42P60953 AC004941.2-201ENST00000427009 228 ntBASIC0.65□□□□□ -2.31
CDC42P60953 AL591043.1-201ENST00000432461 424 ntBASIC0.65□□□□□ -2.31
CDC42P60953 LINC01073-201ENST00000441659 149 ntTSL 3 BASIC0.65□□□□□ -2.31
CDC42P60953 DPP10-AS2-201ENST00000446992 624 ntTSL 5 BASIC0.65□□□□□ -2.31
CDC42P60953 ATP5J2P3-201ENST00000451550 258 ntBASIC0.65□□□□□ -2.31
CDC42P60953 ART2BP-201ENST00000453501 499 ntBASIC0.65□□□□□ -2.31
CDC42P60953 RPL31P3-201ENST00000458430 332 ntBASIC0.65□□□□□ -2.31
CDC42P60953 AC009930.1-201ENST00000522330 191 ntTSL 5 BASIC0.65□□□□□ -2.31
CDC42P60953 AP000756.1-201ENST00000532606 679 ntTSL 2 BASIC0.65□□□□□ -2.31
CDC42P60953 AC123904.2-201ENST00000548059 300 ntBASIC0.65□□□□□ -2.31
CDC42P60953 AC025580.2-205ENST00000559960 552 ntTSL 4 BASIC0.65□□□□□ -2.31
CDC42P60953 MIR3664-201ENST00000579074 99 ntBASIC0.65□□□□□ -2.31
CDC42P60953 AC131159.1-201ENST00000621854 213 ntBASIC0.65□□□□□ -2.31
CDC42P60953 HECTD2-202ENST00000371667 4354 ntTSL 1 (best) BASIC0.64□□□□□ -2.31
CDC42P60953 RNU6-862P-201ENST00000362804 105 ntBASIC0.64□□□□□ -2.31
CDC42P60953 RNU6-78P-201ENST00000362897 107 ntBASIC0.64□□□□□ -2.31
CDC42P60953 RNU6-433P-201ENST00000363216 104 ntBASIC0.64□□□□□ -2.31
CDC42P60953 RNU6-142P-201ENST00000384019 107 ntBASIC0.64□□□□□ -2.31
CDC42P60953 MIR578-201ENST00000384828 96 ntBASIC0.64□□□□□ -2.31
CDC42P60953 AC091705.1-201ENST00000412197 209 ntTSL 5 BASIC0.64□□□□□ -2.31
CDC42P60953 MTCO1P21-201ENST00000416634 589 ntBASIC0.64□□□□□ -2.31
CDC42P60953 MTCO3P29-201ENST00000432119 779 ntBASIC0.64□□□□□ -2.31
CDC42P60953 AL161935.3-201ENST00000433770 347 ntTSL 2 BASIC0.64□□□□□ -2.31
CDC42P60953 MTCYBP39-201ENST00000437562 491 ntBASIC0.64□□□□□ -2.31
CDC42P60953 MTND5P2-201ENST00000442927 1142 ntBASIC0.64□□□□□ -2.31
CDC42P60953 AL358075.2-201ENST00000452785 339 ntTSL 2 BASIC0.64□□□□□ -2.31
CDC42P60953 snoU13.27-201ENST00000459278 104 ntBASIC0.64□□□□□ -2.31
CDC42P60953 AC008852.1-201ENST00000510198 451 ntTSL 2 BASIC0.64□□□□□ -2.31
Retrieved 100 of 98,524 protein–RNA pairs in 90.3 ms