Protein–RNA interactions for Protein: P59780

AP3S2, AP-3 complex subunit sigma-2, humanhuman

Predictions only

Length 193 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S2P59780 AL442163.3-201ENST00000554110 156 ntBASIC0.61□□□□□ -2.31
AP3S2P59780 AC068620.3-201ENST00000602749 560 ntBASIC0.61□□□□□ -2.31
AP3S2P59780 AC126544.2-201ENST00000625174 749 ntBASIC0.61□□□□□ -2.31
AP3S2P59780 AL353651.2-201ENST00000635706 559 ntTSL 5 BASIC0.61□□□□□ -2.31
AP3S2P59780 HIF1A-204ENST00000539097 3956 ntTSL 1 (best) BASIC0.61□□□□□ -2.31
AP3S2P59780 ZNF518A-209ENST00000614149 7911 ntAPPRIS P1 TSL 5 BASIC0.6□□□□□ -2.31
AP3S2P59780 AL391987.6-201ENST00000305671 199 ntBASIC0.6□□□□□ -2.31
AP3S2P59780 RNU6-1123P-201ENST00000362347 106 ntBASIC0.6□□□□□ -2.31
AP3S2P59780 RNU6-78P-201ENST00000362897 107 ntBASIC0.6□□□□□ -2.31
AP3S2P59780 SNORA4.2-201ENST00000365313 147 ntBASIC0.6□□□□□ -2.31
AP3S2P59780 MIR200A-201ENST00000384875 90 ntBASIC0.6□□□□□ -2.31
AP3S2P59780 SNORA17.3-201ENST00000391159 129 ntBASIC0.6□□□□□ -2.31
AP3S2P59780 NPS-201ENST00000398023 270 ntAPPRIS P1 TSL 5 BASIC0.6□□□□□ -2.31
AP3S2P59780 RNU6ATAC27P-201ENST00000408289 119 ntBASIC0.6□□□□□ -2.31
AP3S2P59780 RNU6-733P-201ENST00000410759 104 ntBASIC0.6□□□□□ -2.31
AP3S2P59780 AL121890.1-201ENST00000435457 205 ntBASIC0.6□□□□□ -2.31
AP3S2P59780 AC114485.1-201ENST00000447916 657 ntTSL 3 BASIC0.6□□□□□ -2.31
AP3S2P59780 MYCBP2-AS1-203ENST00000450627 349 ntTSL 3 BASIC0.6□□□□□ -2.31
AP3S2P59780 LINC01774-201ENST00000453569 595 ntTSL 2 BASIC0.6□□□□□ -2.31
AP3S2P59780 SNRPFP4-201ENST00000456366 242 ntBASIC0.6□□□□□ -2.31
AP3S2P59780 AC008539.1-201ENST00000507653 482 ntTSL 3 BASIC0.6□□□□□ -2.31
AP3S2P59780 AC145146.2-202ENST00000508118 326 ntTSL 3 BASIC0.6□□□□□ -2.31
AP3S2P59780 KRTAP13-6P-201ENST00000508999 371 ntBASIC0.6□□□□□ -2.31
AP3S2P59780 AC090023.1-201ENST00000545750 443 ntTSL 3 BASIC0.6□□□□□ -2.31
AP3S2P59780 AC093012.1-203ENST00000548437 450 ntTSL 2 BASIC0.6□□□□□ -2.31
AP3S2P59780 AC092071.1-201ENST00000597260 549 ntTSL 5 BASIC0.6□□□□□ -2.31
AP3S2P59780 AC072039.2-201ENST00000608883 439 ntBASIC0.6□□□□□ -2.31
AP3S2P59780 AC026585.1-201ENST00000619582 524 ntBASIC0.6□□□□□ -2.31
AP3S2P59780 CAPZA2-214ENST00000628758 525 ntTSL 5 BASIC0.6□□□□□ -2.31
AP3S2P59780 CDK1-209ENST00000614696 1884 ntTSL 5 BASIC0.59□□□□□ -2.31
AP3S2P59780 MT-ATP6-201ENST00000361899 681 ntAPPRIS P1 BASIC0.59□□□□□ -2.31
AP3S2P59780 RNU6-960P-201ENST00000364056 120 ntBASIC0.59□□□□□ -2.31
AP3S2P59780 RNY4P16-201ENST00000364768 94 ntBASIC0.59□□□□□ -2.31
AP3S2P59780 RNU6-723P-201ENST00000383973 107 ntBASIC0.59□□□□□ -2.31
AP3S2P59780 SNORD116-12-201ENST00000384468 92 ntBASIC0.59□□□□□ -2.31
AP3S2P59780 SNORD12-201ENST00000391002 90 ntBASIC0.59□□□□□ -2.31
AP3S2P59780 AP1B1P2-201ENST00000416196 106 ntBASIC0.59□□□□□ -2.31
AP3S2P59780 AC035139.1-201ENST00000423256 273 ntTSL 3 BASIC0.59□□□□□ -2.31
AP3S2P59780 AC108667.1-201ENST00000428618 249 ntBASIC0.59□□□□□ -2.31
AP3S2P59780 SIRPG-AS1-201ENST00000437384 410 ntTSL 3 BASIC0.59□□□□□ -2.31
AP3S2P59780 AC073910.1-201ENST00000445047 438 ntBASIC0.59□□□□□ -2.31
AP3S2P59780 DPP10-AS2-201ENST00000446992 624 ntTSL 5 BASIC0.59□□□□□ -2.31
AP3S2P59780 TOMM22P6-201ENST00000465035 409 ntBASIC0.59□□□□□ -2.31
AP3S2P59780 SNRPGP7-201ENST00000469016 106 ntBASIC0.59□□□□□ -2.31
AP3S2P59780 RAP1BP2-201ENST00000478270 544 ntBASIC0.59□□□□□ -2.31
AP3S2P59780 RN7SL429P-201ENST00000479090 223 ntBASIC0.59□□□□□ -2.31
AP3S2P59780 RN7SL489P-201ENST00000486185 223 ntBASIC0.59□□□□□ -2.31
AP3S2P59780 RN7SL327P-201ENST00000488659 223 ntBASIC0.59□□□□□ -2.31
AP3S2P59780 AC116353.3-201ENST00000511215 249 ntBASIC0.59□□□□□ -2.31
AP3S2P59780 MTND3P5-201ENST00000512798 333 ntBASIC0.59□□□□□ -2.31
AP3S2P59780 RNU6-322P-201ENST00000516010 103 ntBASIC0.59□□□□□ -2.31
AP3S2P59780 RNA5SP168-201ENST00000516642 112 ntBASIC0.59□□□□□ -2.31
AP3S2P59780 AP002453.2-201ENST00000533503 320 ntBASIC0.59□□□□□ -2.31
AP3S2P59780 AC123904.2-201ENST00000548059 300 ntBASIC0.59□□□□□ -2.31
AP3S2P59780 AC025423.5-201ENST00000550230 219 ntBASIC0.59□□□□□ -2.31
AP3S2P59780 AC021231.3-201ENST00000558497 370 ntBASIC0.59□□□□□ -2.31
AP3S2P59780 AC109446.1-201ENST00000566172 220 ntBASIC0.59□□□□□ -2.31
AP3S2P59780 RN7SL853P-201ENST00000617250 223 ntBASIC0.59□□□□□ -2.31
AP3S2P59780 RMST_7.1-201ENST00000621935 268 ntBASIC0.59□□□□□ -2.31
AP3S2P59780 MIR378A-201ENST00000362177 66 ntBASIC0.58□□□□□ -2.32
AP3S2P59780 RNU4-79P-201ENST00000362764 141 ntBASIC0.58□□□□□ -2.32
AP3S2P59780 RNU6-527P-201ENST00000363425 104 ntBASIC0.58□□□□□ -2.32
AP3S2P59780 AL591043.1-201ENST00000432461 424 ntBASIC0.58□□□□□ -2.32
AP3S2P59780 AC007327.1-201ENST00000447461 264 ntBASIC0.58□□□□□ -2.32
AP3S2P59780 LINC02066-201ENST00000492731 580 ntTSL 4 BASIC0.58□□□□□ -2.32
AP3S2P59780 RNU6-1041P-201ENST00000516254 102 ntBASIC0.58□□□□□ -2.32
AP3S2P59780 AC087318.1-201ENST00000536786 389 ntTSL 3 BASIC0.58□□□□□ -2.32
AP3S2P59780 AL512791.1-201ENST00000555853 300 ntTSL 3 BASIC0.58□□□□□ -2.32
AP3S2P59780 RNU6-88P-201ENST00000606801 100 ntBASIC0.58□□□□□ -2.32
AP3S2P59780 TEX41-243ENST00000614173 190 ntTSL 5 BASIC0.58□□□□□ -2.32
AP3S2P59780 AL359547.2-201ENST00000615810 418 ntBASIC0.58□□□□□ -2.32
AP3S2P59780 AL133216.2-202ENST00000634512 349 ntBASIC0.58□□□□□ -2.32
AP3S2P59780 SNORD98-201ENST00000636377 67 ntBASIC0.58□□□□□ -2.32
AP3S2P59780 C9orf84-205ENST00000394779 5060 ntAPPRIS ALT2 TSL 2 BASIC0.57□□□□□ -2.32
AP3S2P59780 Y_RNA.46-201ENST00000362695 102 ntBASIC0.57□□□□□ -2.32
AP3S2P59780 RNU6-1285P-201ENST00000363480 105 ntBASIC0.57□□□□□ -2.32
AP3S2P59780 RNU6-142P-201ENST00000384019 107 ntBASIC0.57□□□□□ -2.32
AP3S2P59780 MIR605-201ENST00000385078 83 ntBASIC0.57□□□□□ -2.32
AP3S2P59780 MIR764-201ENST00000390811 85 ntBASIC0.57□□□□□ -2.32
AP3S2P59780 RNU6-910P-201ENST00000390844 107 ntBASIC0.57□□□□□ -2.32
AP3S2P59780 AL117342.1-201ENST00000404861 406 ntBASIC0.57□□□□□ -2.32
AP3S2P59780 RNU6ATAC31P-201ENST00000408513 126 ntBASIC0.57□□□□□ -2.32
AP3S2P59780 MAGI2-AS2-201ENST00000411616 476 ntTSL 2 BASIC0.57□□□□□ -2.32
AP3S2P59780 RPS3AP1-201ENST00000413190 320 ntBASIC0.57□□□□□ -2.32
AP3S2P59780 AL031779.1-201ENST00000415663 330 ntBASIC0.57□□□□□ -2.32
AP3S2P59780 USP9YP14-201ENST00000430663 563 ntBASIC0.57□□□□□ -2.32
AP3S2P59780 AC011891.1-201ENST00000437088 432 ntTSL 3 BASIC0.57□□□□□ -2.32
AP3S2P59780 MTCYBP39-201ENST00000437562 491 ntBASIC0.57□□□□□ -2.32
AP3S2P59780 RPL39P38-201ENST00000467018 153 ntBASIC0.57□□□□□ -2.32
AP3S2P59780 AC093893.1-201ENST00000505781 510 ntTSL 5 BASIC0.57□□□□□ -2.32
AP3S2P59780 AC079349.1-201ENST00000509096 589 ntTSL 2 BASIC0.57□□□□□ -2.32
AP3S2P59780 SNORA31.2-201ENST00000516019 134 ntBASIC0.57□□□□□ -2.32
AP3S2P59780 RNU1-86P-201ENST00000516108 154 ntBASIC0.57□□□□□ -2.32
AP3S2P59780 RNU6-123P-201ENST00000516163 102 ntBASIC0.57□□□□□ -2.32
AP3S2P59780 RNU1-107P-201ENST00000516617 154 ntBASIC0.57□□□□□ -2.32
AP3S2P59780 RN7SKP219-201ENST00000516825 296 ntBASIC0.57□□□□□ -2.32
AP3S2P59780 AL157911.1-202ENST00000554123 502 ntTSL 3 BASIC0.57□□□□□ -2.32
AP3S2P59780 LINC02311-201ENST00000556144 383 ntTSL 3 BASIC0.57□□□□□ -2.32
AP3S2P59780 MIR4698-201ENST00000577795 80 ntBASIC0.57□□□□□ -2.32
AP3S2P59780 MIR3136-201ENST00000583498 78 ntBASIC0.57□□□□□ -2.32
Retrieved 100 of 98,524 protein–RNA pairs in 112.8 ms