Protein–RNA interactions for Protein: P58418

CLRN1, Clarin-1, humanhuman

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLRN1P58418 AL079342.1-201ENST00000401460 267 ntBASIC3.12□□□□□ -1.91
CLRN1P58418 RNU6-1077P-201ENST00000410506 102 ntBASIC3.12□□□□□ -1.91
CLRN1P58418 RHEBP3-201ENST00000411920 351 ntBASIC3.12□□□□□ -1.91
CLRN1P58418 AL590135.1-201ENST00000422215 156 ntBASIC3.12□□□□□ -1.91
CLRN1P58418 AC019205.3-201ENST00000424573 156 ntBASIC3.12□□□□□ -1.91
CLRN1P58418 AL445305.1-201ENST00000432577 575 ntBASIC3.12□□□□□ -1.91
CLRN1P58418 AC090617.2-201ENST00000433167 404 ntTSL 3 BASIC3.12□□□□□ -1.91
CLRN1P58418 AC004383.1-201ENST00000438135 289 ntBASIC3.12□□□□□ -1.91
CLRN1P58418 AC133865.1-201ENST00000438619 339 ntTSL 3 BASIC3.12□□□□□ -1.91
CLRN1P58418 RPS15AP7-201ENST00000439294 405 ntBASIC3.12□□□□□ -1.91
CLRN1P58418 AL445490.2-201ENST00000440492 441 ntTSL 3 BASIC3.12□□□□□ -1.91
CLRN1P58418 AL357552.1-201ENST00000445254 415 ntBASIC3.12□□□□□ -1.91
CLRN1P58418 AP000705.1-201ENST00000454567 350 ntBASIC3.12□□□□□ -1.91
CLRN1P58418 AL136164.1-201ENST00000456795 352 ntTSL 3 BASIC3.12□□□□□ -1.91
CLRN1P58418 RPL23AP67-201ENST00000465341 474 ntBASIC3.12□□□□□ -1.91
CLRN1P58418 TRBVB-201ENST00000477100 408 ntBASIC3.12□□□□□ -1.91
CLRN1P58418 SNORA70.19-201ENST00000516717 90 ntBASIC3.12□□□□□ -1.91
CLRN1P58418 SNORA31.16-201ENST00000516773 139 ntBASIC3.12□□□□□ -1.91
CLRN1P58418 Y_RNA.713-201ENST00000517013 96 ntBASIC3.12□□□□□ -1.91
CLRN1P58418 SNORA31.21-201ENST00000517180 77 ntBASIC3.12□□□□□ -1.91
CLRN1P58418 AC026333.2-201ENST00000542164 106 ntBASIC3.12□□□□□ -1.91
CLRN1P58418 AC112481.1-201ENST00000549669 901 ntTSL 2 BASIC3.12□□□□□ -1.91
CLRN1P58418 AF111169.4-202ENST00000553507 262 ntTSL 3 BASIC3.12□□□□□ -1.91
CLRN1P58418 UBL5P4-201ENST00000562584 236 ntBASIC3.12□□□□□ -1.91
CLRN1P58418 AC005357.1-201ENST00000588399 301 ntBASIC3.12□□□□□ -1.91
CLRN1P58418 AL078605.1-201ENST00000603529 500 ntBASIC3.12□□□□□ -1.91
CLRN1P58418 Y_RNA.772-201ENST00000606692 102 ntBASIC3.12□□□□□ -1.91
CLRN1P58418 AL121772.2-201ENST00000614331 297 ntBASIC3.12□□□□□ -1.91
CLRN1P58418 MIR8058-201ENST00000615737 89 ntBASIC3.12□□□□□ -1.91
CLRN1P58418 AC022149.2-201ENST00000621061 203 ntBASIC3.12□□□□□ -1.91
CLRN1P58418 AL136164.4-201ENST00000625013 2135 ntBASIC3.12□□□□□ -1.91
CLRN1P58418 RTKN2-201ENST00000315289 2383 ntTSL 2 BASIC3.12□□□□□ -1.91
CLRN1P58418 XRCC4-203ENST00000396027 1530 ntAPPRIS ALT1 TSL 5 BASIC3.12□□□□□ -1.91
CLRN1P58418 TUSC7-203ENST00000477539 2415 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
CLRN1P58418 MFSD8-233ENST00000641482 4860 ntBASIC3.11□□□□□ -1.91
CLRN1P58418 AC002543.1-201ENST00000299783 1954 ntBASIC3.11□□□□□ -1.91
CLRN1P58418 SUGT1-201ENST00000310528 14131 ntAPPRIS P3 TSL 1 (best) BASIC3.11□□□□□ -1.91
CLRN1P58418 Y_RNA.14-201ENST00000362415 103 ntBASIC3.11□□□□□ -1.91
CLRN1P58418 RNA5SP361-201ENST00000362686 118 ntBASIC3.11□□□□□ -1.91
CLRN1P58418 RNU6-1159P-201ENST00000362933 107 ntBASIC3.11□□□□□ -1.91
CLRN1P58418 RNU6-926P-201ENST00000384075 107 ntBASIC3.11□□□□□ -1.91
CLRN1P58418 MIR10B-201ENST00000385011 110 ntBASIC3.11□□□□□ -1.91
CLRN1P58418 RNU6-750P-201ENST00000390946 107 ntBASIC3.11□□□□□ -1.91
CLRN1P58418 SNORA26.3-201ENST00000391119 136 ntBASIC3.11□□□□□ -1.91
CLRN1P58418 DBIP2-201ENST00000419076 262 ntBASIC3.11□□□□□ -1.91
CLRN1P58418 AC012306.1-201ENST00000423267 114 ntBASIC3.11□□□□□ -1.91
CLRN1P58418 AC090525.1-201ENST00000479116 478 ntBASIC3.11□□□□□ -1.91
CLRN1P58418 AC026784.1-201ENST00000507986 352 ntBASIC3.11□□□□□ -1.91
CLRN1P58418 AC008957.1-201ENST00000510740 478 ntTSL 3 BASIC3.11□□□□□ -1.91
CLRN1P58418 AC104619.4-201ENST00000510773 249 ntBASIC3.11□□□□□ -1.91
CLRN1P58418 RNU1-95P-201ENST00000516357 160 ntBASIC3.11□□□□□ -1.91
CLRN1P58418 RNU1-128P-201ENST00000516704 160 ntBASIC3.11□□□□□ -1.91
CLRN1P58418 RNU6-58P-201ENST00000517143 103 ntBASIC3.11□□□□□ -1.91
CLRN1P58418 AL356133.2-201ENST00000521572 371 ntTSL 3 BASIC3.11□□□□□ -1.91
CLRN1P58418 AP006245.1-201ENST00000522549 120 ntBASIC3.11□□□□□ -1.91
CLRN1P58418 TGIF1P1-201ENST00000558095 802 ntBASIC3.11□□□□□ -1.91
CLRN1P58418 MIR5695-201ENST00000579717 85 ntBASIC3.11□□□□□ -1.91
CLRN1P58418 BX546450.2-201ENST00000602419 435 ntTSL 5 BASIC3.11□□□□□ -1.91
CLRN1P58418 IGKV1OR2-6-201ENST00000603485 277 ntBASIC3.11□□□□□ -1.91
CLRN1P58418 AC005296.1-201ENST00000616145 209 ntBASIC3.11□□□□□ -1.91
CLRN1P58418 MIR376A1-201ENST00000616574 68 ntBASIC3.11□□□□□ -1.91
CLRN1P58418 DST-204ENST00000361203 22431 ntAPPRIS ALT2 TSL 5 BASIC3.11□□□□□ -1.91
CLRN1P58418 CYSLTR2-201ENST00000282018 4672 ntAPPRIS P1 BASIC3.11□□□□□ -1.91
CLRN1P58418 EPC1-203ENST00000375110 3909 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
CLRN1P58418 KNL1-202ENST00000399668 7607 ntAPPRIS ALT2 TSL 1 (best) BASIC3.11□□□□□ -1.91
CLRN1P58418 CLIC2-202ENST00000369449 2655 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
CLRN1P58418 DOCK7-204ENST00000454575 6985 ntAPPRIS ALT2 TSL 1 (best) BASIC3.11□□□□□ -1.91
CLRN1P58418 GPRC6A-202ENST00000368549 2622 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
CLRN1P58418 LUZP2-208ENST00000620308 4981 ntTSL 5 BASIC3.1□□□□□ -1.91
CLRN1P58418 AC242426.3-202ENST00000607149 2397 ntTSL 5 BASIC3.1□□□□□ -1.91
CLRN1P58418 C6orf10-204ENST00000447241 2148 ntAPPRIS P3 TSL 5 BASIC3.1□□□□□ -1.91
CLRN1P58418 MYSM1-203ENST00000472487 7785 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
CLRN1P58418 CYYR1-AS1-201ENST00000357401 3412 ntTSL 2 BASIC3.1□□□□□ -1.91
CLRN1P58418 RNU6-212P-201ENST00000362642 104 ntBASIC3.1□□□□□ -1.91
CLRN1P58418 Y_RNA.84-201ENST00000363011 104 ntBASIC3.1□□□□□ -1.91
CLRN1P58418 SNORA5A-201ENST00000384111 134 ntBASIC3.1□□□□□ -1.91
CLRN1P58418 SNORD115-46-201ENST00000390982 71 ntBASIC3.1□□□□□ -1.91
CLRN1P58418 RNU6-159P-201ENST00000391080 106 ntBASIC3.1□□□□□ -1.91
CLRN1P58418 EI24P2-201ENST00000397776 1076 ntBASIC3.1□□□□□ -1.91
CLRN1P58418 RNU2-20P-201ENST00000410425 191 ntBASIC3.1□□□□□ -1.91
CLRN1P58418 RNU2-25P-201ENST00000411041 191 ntBASIC3.1□□□□□ -1.91
CLRN1P58418 RNU6-847P-201ENST00000411115 108 ntBASIC3.1□□□□□ -1.91
CLRN1P58418 AC138623.1-201ENST00000418060 216 ntBASIC3.1□□□□□ -1.91
CLRN1P58418 AC090952.1-201ENST00000424242 446 ntTSL 3 BASIC3.1□□□□□ -1.91
CLRN1P58418 AC096638.1-201ENST00000444678 216 ntBASIC3.1□□□□□ -1.91
CLRN1P58418 AC117394.2-201ENST00000487827 323 ntTSL 3 BASIC3.1□□□□□ -1.91
CLRN1P58418 MTND1P19-201ENST00000511780 315 ntBASIC3.1□□□□□ -1.91
CLRN1P58418 AC115990.1-201ENST00000526957 301 ntBASIC3.1□□□□□ -1.91
CLRN1P58418 AL139193.1-201ENST00000554967 539 ntTSL 4 BASIC3.1□□□□□ -1.91
CLRN1P58418 AC105137.2-201ENST00000569073 466 ntBASIC3.1□□□□□ -1.91
CLRN1P58418 MIR4300-201ENST00000581016 96 ntBASIC3.1□□□□□ -1.91
CLRN1P58418 AC022335.1-204ENST00000590779 600 ntAPPRIS ALT2 TSL 2 BASIC3.1□□□□□ -1.91
CLRN1P58418 AL137843.1-201ENST00000605078 385 ntBASIC3.1□□□□□ -1.91
CLRN1P58418 AL138963.2-201ENST00000605137 226 ntBASIC3.1□□□□□ -1.91
CLRN1P58418 NEB-218ENST00000603639 25578 ntAPPRIS ALT2 TSL 5 BASIC3.1□□□□□ -1.91
CLRN1P58418 NEB-219ENST00000604864 25578 ntAPPRIS ALT2 TSL 5 BASIC3.1□□□□□ -1.91
CLRN1P58418 SNHG14-215ENST00000551631 4008 ntTSL 5 BASIC3.1□□□□□ -1.91
CLRN1P58418 HELZ-201ENST00000358691 13810 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
CLRN1P58418 MTND5P6-201ENST00000422338 1798 ntBASIC3.1□□□□□ -1.91
CLRN1P58418 AC091152.2-201ENST00000591628 2569 ntBASIC3.09□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 116 ms