Protein–RNA interactions for Protein: P56589

PEX3, Peroxisomal biogenesis factor 3, humanhuman

Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PEX3P56589 RNU5E-7P-201ENST00000365290 117 ntBASIC2.18□□□□□ -2.06
PEX3P56589 RNU1-52P-201ENST00000384190 164 ntBASIC2.18□□□□□ -2.06
PEX3P56589 SNORD37.1-201ENST00000390968 65 ntBASIC2.18□□□□□ -2.06
PEX3P56589 RNU6-1140P-201ENST00000410517 106 ntBASIC2.18□□□□□ -2.06
PEX3P56589 FCF1P9-201ENST00000412546 282 ntBASIC2.18□□□□□ -2.06
PEX3P56589 EIF1P1-201ENST00000421436 341 ntBASIC2.18□□□□□ -2.06
PEX3P56589 AL445687.1-201ENST00000439946 251 ntBASIC2.18□□□□□ -2.06
PEX3P56589 IKZF2-209ENST00000442445 551 ntTSL 5 BASIC2.18□□□□□ -2.06
PEX3P56589 AL139109.1-201ENST00000455491 297 ntBASIC2.18□□□□□ -2.06
PEX3P56589 NAF1-205ENST00000509434 385 ntTSL 3 BASIC2.18□□□□□ -2.06
PEX3P56589 RNU1-40P-201ENST00000516816 164 ntBASIC2.18□□□□□ -2.06
PEX3P56589 RNU1-97P-201ENST00000516872 164 ntBASIC2.18□□□□□ -2.06
PEX3P56589 SCARNA3-201ENST00000517097 143 ntBASIC2.18□□□□□ -2.06
PEX3P56589 AC025917.1-202ENST00000566344 635 ntTSL 5 BASIC2.18□□□□□ -2.06
PEX3P56589 MIR4448-201ENST00000584360 86 ntBASIC2.18□□□□□ -2.06
PEX3P56589 AL589765.7-201ENST00000601684 629 ntTSL 3 BASIC2.18□□□□□ -2.06
PEX3P56589 AC116312.1-201ENST00000606841 314 ntBASIC2.18□□□□□ -2.06
PEX3P56589 FAM157A-202ENST00000615155 405 ntBASIC2.18□□□□□ -2.06
PEX3P56589 AC245884.12-201ENST00000615364 59 ntBASIC2.18□□□□□ -2.06
PEX3P56589 C8orf59-212ENST00000615697 483 ntAPPRIS P1 TSL 2 BASIC2.18□□□□□ -2.06
PEX3P56589 CYLC1-202ENST00000621735 379 ntAPPRIS ALT2 TSL 3 BASIC2.18□□□□□ -2.06
PEX3P56589 KIF20B-202ENST00000371728 6419 ntAPPRIS ALT2 TSL 1 (best) BASIC2.17□□□□□ -2.06
PEX3P56589 RNU6-1010P-201ENST00000362757 107 ntBASIC2.17□□□□□ -2.06
PEX3P56589 SNORD115-47-201ENST00000391226 86 ntBASIC2.17□□□□□ -2.06
PEX3P56589 RPS29P13-201ENST00000402041 169 ntBASIC2.17□□□□□ -2.06
PEX3P56589 AL133475.1-201ENST00000404414 305 ntBASIC2.17□□□□□ -2.06
PEX3P56589 U6atac.2-201ENST00000408644 118 ntBASIC2.17□□□□□ -2.06
PEX3P56589 AL513008.1-201ENST00000412701 161 ntTSL 5 BASIC2.17□□□□□ -2.06
PEX3P56589 LINC02331-201ENST00000418927 602 ntTSL 5 BASIC2.17□□□□□ -2.06
PEX3P56589 ARL5AP1-201ENST00000418991 388 ntBASIC2.17□□□□□ -2.06
PEX3P56589 BX276092.3-201ENST00000424182 230 ntBASIC2.17□□□□□ -2.06
PEX3P56589 MRPS10P2-201ENST00000431226 381 ntBASIC2.17□□□□□ -2.06
PEX3P56589 FABP5P14-201ENST00000437273 393 ntBASIC2.17□□□□□ -2.06
PEX3P56589 AC010095.1-201ENST00000443543 144 ntBASIC2.17□□□□□ -2.06
PEX3P56589 AL138900.1-201ENST00000449345 399 ntTSL 3 BASIC2.17□□□□□ -2.06
PEX3P56589 AC010974.1-201ENST00000450509 374 ntTSL 3 BASIC2.17□□□□□ -2.06
PEX3P56589 AC006026.2-201ENST00000457376 180 ntBASIC2.17□□□□□ -2.06
PEX3P56589 RNU6-717P-201ENST00000459076 104 ntBASIC2.17□□□□□ -2.06
PEX3P56589 snoU13.15-201ENST00000459407 104 ntBASIC2.17□□□□□ -2.06
PEX3P56589 AC080013.2-201ENST00000460866 323 ntBASIC2.17□□□□□ -2.06
PEX3P56589 UBL5P3-201ENST00000475112 231 ntBASIC2.17□□□□□ -2.06
PEX3P56589 AC008526.1-201ENST00000509149 338 ntBASIC2.17□□□□□ -2.06
PEX3P56589 AC023866.1-201ENST00000518064 579 ntTSL 4 BASIC2.17□□□□□ -2.06
PEX3P56589 AC090568.2-205ENST00000518631 576 ntTSL 4 BASIC2.17□□□□□ -2.06
PEX3P56589 MTND1P35-201ENST00000526739 508 ntBASIC2.17□□□□□ -2.06
PEX3P56589 AP005597.4-201ENST00000526762 229 ntBASIC2.17□□□□□ -2.06
PEX3P56589 AP005057.1-201ENST00000583827 574 ntTSL 4 BASIC2.17□□□□□ -2.06
PEX3P56589 MIR4765-201ENST00000585007 77 ntBASIC2.17□□□□□ -2.06
PEX3P56589 MIR5692C1-201ENST00000585309 91 ntBASIC2.17□□□□□ -2.06
PEX3P56589 DCAF17-212ENST00000611110 975 ntTSL 1 (best) BASIC2.17□□□□□ -2.06
PEX3P56589 AC068631.1-220ENST00000630726 256 ntTSL 5 BASIC2.17□□□□□ -2.06
PEX3P56589 OXR1-209ENST00000517566 4501 ntTSL 1 (best) BASIC2.17□□□□□ -2.06
PEX3P56589 OR8K3-204ENST00000641689 2380 ntAPPRIS P1 BASIC2.16□□□□□ -2.06
PEX3P56589 AC092881.1-201ENST00000638218 2733 ntBASIC2.16□□□□□ -2.06
PEX3P56589 RNU6-486P-201ENST00000363116 107 ntBASIC2.16□□□□□ -2.06
PEX3P56589 TRAJ21-201ENST00000390516 55 ntAPPRIS P1 BASIC2.16□□□□□ -2.06
PEX3P56589 RNA5SP338-201ENST00000410495 85 ntBASIC2.16□□□□□ -2.06
PEX3P56589 AC005062.1-207ENST00000418442 587 ntTSL 3 BASIC2.16□□□□□ -2.06
PEX3P56589 AC012370.1-201ENST00000419244 530 ntTSL 3 BASIC2.16□□□□□ -2.06
PEX3P56589 AL162726.4-201ENST00000422010 673 ntTSL 5 BASIC2.16□□□□□ -2.06
PEX3P56589 TOMM20P4-201ENST00000427861 435 ntBASIC2.16□□□□□ -2.06
PEX3P56589 AL122017.1-201ENST00000435858 784 ntTSL 2 BASIC2.16□□□□□ -2.06
PEX3P56589 LINC01774-201ENST00000453569 595 ntTSL 2 BASIC2.16□□□□□ -2.06
PEX3P56589 snoU13.14-201ENST00000459372 104 ntBASIC2.16□□□□□ -2.06
PEX3P56589 RNU7-138P-201ENST00000459479 64 ntBASIC2.16□□□□□ -2.06
PEX3P56589 LINC00971-201ENST00000482721 535 ntTSL 2 BASIC2.16□□□□□ -2.06
PEX3P56589 RNA5SP112-201ENST00000515937 99 ntBASIC2.16□□□□□ -2.06
PEX3P56589 MIR514B-201ENST00000516774 80 ntBASIC2.16□□□□□ -2.06
PEX3P56589 AC109479.2-201ENST00000517842 174 ntBASIC2.16□□□□□ -2.06
PEX3P56589 AC068992.1-202ENST00000519280 270 ntTSL 3 BASIC2.16□□□□□ -2.06
PEX3P56589 POC1B-211ENST00000549504 581 ntTSL 5 BASIC2.16□□□□□ -2.06
PEX3P56589 LINC02386-203ENST00000552182 501 ntTSL 3 BASIC2.16□□□□□ -2.06
PEX3P56589 AL049869.2-201ENST00000556634 365 ntTSL 2 BASIC2.16□□□□□ -2.06
PEX3P56589 AC012435.2-201ENST00000562869 361 ntTSL 3 BASIC2.16□□□□□ -2.06
PEX3P56589 MIR3199-1-201ENST00000582434 88 ntBASIC2.16□□□□□ -2.06
PEX3P56589 LINC02112-205ENST00000606744 236 ntTSL 1 (best) BASIC2.16□□□□□ -2.06
PEX3P56589 AL159153.1-201ENST00000619688 317 ntBASIC2.16□□□□□ -2.06
PEX3P56589 AC009487.4-201ENST00000624969 3585 ntBASIC2.16□□□□□ -2.06
PEX3P56589 USP53-202ENST00000450251 6072 ntAPPRIS P1 TSL 5 BASIC2.15□□□□□ -2.06
PEX3P56589 AC008163.1-205ENST00000413944 4649 ntTSL 1 (best) BASIC2.15□□□□□ -2.06
PEX3P56589 MTND4P5-201ENST00000435821 1374 ntBASIC2.15□□□□□ -2.07
PEX3P56589 MTND4P27-201ENST00000450813 1354 ntBASIC2.15□□□□□ -2.07
PEX3P56589 Z75746.1-201ENST00000440243 2080 ntBASIC2.15□□□□□ -2.07
PEX3P56589 RNU6-858P-201ENST00000362436 107 ntBASIC2.15□□□□□ -2.07
PEX3P56589 Y_RNA.40-201ENST00000362645 93 ntBASIC2.15□□□□□ -2.07
PEX3P56589 RNU6-428P-201ENST00000362942 107 ntBASIC2.15□□□□□ -2.07
PEX3P56589 RNU6-336P-201ENST00000364891 107 ntBASIC2.15□□□□□ -2.07
PEX3P56589 RNU4-52P-201ENST00000384209 138 ntBASIC2.15□□□□□ -2.07
PEX3P56589 RNU6-1072P-201ENST00000384703 107 ntBASIC2.15□□□□□ -2.07
PEX3P56589 RNU6-443P-201ENST00000384780 107 ntBASIC2.15□□□□□ -2.07
PEX3P56589 AL355497.1-201ENST00000406262 551 ntBASIC2.15□□□□□ -2.07
PEX3P56589 MIR1277-201ENST00000408536 78 ntBASIC2.15□□□□□ -2.07
PEX3P56589 RNA5SP390-201ENST00000410191 113 ntBASIC2.15□□□□□ -2.07
PEX3P56589 Y_RNA.615-201ENST00000410769 117 ntBASIC2.15□□□□□ -2.07
PEX3P56589 AL500522.1-201ENST00000423667 318 ntTSL 3 BASIC2.15□□□□□ -2.07
PEX3P56589 AL365400.1-201ENST00000431854 640 ntBASIC2.15□□□□□ -2.07
PEX3P56589 SMG7-AS1-202ENST00000432837 466 ntTSL 3 BASIC2.15□□□□□ -2.07
PEX3P56589 AL121890.1-201ENST00000435457 205 ntBASIC2.15□□□□□ -2.07
PEX3P56589 LINC02264-201ENST00000442020 576 ntTSL 3 BASIC2.15□□□□□ -2.07
PEX3P56589 AL441985.1-201ENST00000457727 251 ntBASIC2.15□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 109.9 ms